RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 CNBD1Q8NA66 436 aa27.61■■■□□ 2.01
PPM1F-208ENST00000496143 PDZRN3Q9UPQ7 1066 aa27.61■■■□□ 2.01
PPM1F-208ENST00000496143 MAP3K15Q6ZN16 1313 aa27.61■■■□□ 2.01
PPM1F-208ENST00000496143 ST5P78524 1137 aa27.6■■■□□ 2.01
PPM1F-208ENST00000496143 KCNA3P22001 575 aa27.59■■■□□ 2.01
PPM1F-208ENST00000496143 CHRNA5P30532 468 aa27.59■■■□□ 2.01
PPM1F-208ENST00000496143 PRR5LQ6MZQ0 368 aa27.59■■■□□ 2.01
PPM1F-208ENST00000496143 NBPF5PQ86XG9 351 aaPredicted RBP27.59■■■□□ 2.01
PPM1F-208ENST00000496143 NIP7Q9Y221 180 aaKnown RBP eCLIP27.59■■■□□ 2.01
PPM1F-208ENST00000496143 PDE6BP35913 854 aa27.58■■■□□ 2.01
PPM1F-208ENST00000496143 KRT24Q2M2I5 525 aa27.58■■■□□ 2.01
PPM1F-208ENST00000496143 DALRD3Q5D0E6 543 aaKnown RBP27.58■■■□□ 2.01
PPM1F-208ENST00000496143 HDGFL1Q5TGJ6 251 aa27.58■■■□□ 2.01
PPM1F-208ENST00000496143 BRIP1Q9BX63 1249 aa27.58■■■□□ 2.01
PPM1F-208ENST00000496143 H0YIN7 160 aa27.57■■■□□ 2
PPM1F-208ENST00000496143 TTLL7Q6ZT98 887 aa27.57■■■□□ 2
PPM1F-208ENST00000496143 FAM9BQ8IZU0 186 aa27.57■■■□□ 2
PPM1F-208ENST00000496143 NECTIN2Q92692 538 aa27.57■■■□□ 2
PPM1F-208ENST00000496143 PDIA6Q15084 440 aa27.56■■■□□ 2
PPM1F-208ENST00000496143 HLFQ16534 295 aa27.56■■■□□ 2
PPM1F-208ENST00000496143 DUSP27Q5VZP5 1158 aa27.56■■■□□ 2
PPM1F-208ENST00000496143 WWC1Q8IX03 1113 aa27.56■■■□□ 2
PPM1F-208ENST00000496143 CHMP4AQ9BY43 222 aa27.56■■■□□ 2
PPM1F-208ENST00000496143 DDX21Q9NR30 783 aaKnown RBP eCLIP27.56■■■□□ 2
PPM1F-208ENST00000496143 TPTE2Q6XPS3 522 aa27.55■■■□□ 2
PPM1F-208ENST00000496143 C2CD5Q86YS7 1000 aa27.55■■■□□ 2
PPM1F-208ENST00000496143 ZBTB3Q9H5J0 574 aa27.55■■■□□ 2
PPM1F-208ENST00000496143 ATP10DQ9P241 1426 aa27.54■■■□□ 2
PPM1F-208ENST00000496143 DBF4Q9UBU7 674 aaPredicted RBP27.54■■■□□ 2
PPM1F-208ENST00000496143 PROSER3Q2NL68 480 aa27.53■■■□□ 2
PPM1F-208ENST00000496143 LRP10Q7Z4F1 713 aa27.53■■■□□ 2
PPM1F-208ENST00000496143 BRCA1P38398 1863 aaKnown RBP27.53■■■□□ 2
PPM1F-208ENST00000496143 IL16Q14005 1332 aa27.52■■■□□ 2
PPM1F-208ENST00000496143 GOLGB1Q14789 3259 aaKnown RBP27.52■■■□□ 2
PPM1F-208ENST00000496143 GIGYF2Q6Y7W6 1299 aaKnown RBP27.52■■■□□ 2
PPM1F-208ENST00000496143 NYXQ9GZU5 481 aa27.52■■■□□ 2
PPM1F-208ENST00000496143 ANXA1P04083 346 aa27.51■■□□□ 1.99
PPM1F-208ENST00000496143 GTF2E1P29083 439 aaPredicted RBP27.51■■□□□ 1.99
PPM1F-208ENST00000496143 CHPF2Q9P2E5 772 aa27.51■■□□□ 1.99
PPM1F-208ENST00000496143 SENP3-EIF4A1A0A087X0R7 540 aa27.5■■□□□ 1.99
PPM1F-208ENST00000496143 ARHGAP27Q6ZUM4 889 aa27.5■■□□□ 1.99
PPM1F-208ENST00000496143 COPS6Q7L5N1 327 aa27.5■■□□□ 1.99
PPM1F-208ENST00000496143 CCDC24Q8N4L8 307 aa27.5■■□□□ 1.99
PPM1F-208ENST00000496143 TTLL6Q8N841 843 aa27.5■■□□□ 1.99
PPM1F-208ENST00000496143 AIMP1Q12904 312 aaKnown RBP27.49■■□□□ 1.99
PPM1F-208ENST00000496143 XAGE3Q8WTP9 111 aa27.49■■□□□ 1.99
PPM1F-208ENST00000496143 HYPKQ9NX55 129 aa27.49■■□□□ 1.99
PPM1F-208ENST00000496143 UTRNP46939 3433 aa27.49■■□□□ 1.99
PPM1F-208ENST00000496143 FAM177BA6PVY3 158 aa27.48■■□□□ 1.99
PPM1F-208ENST00000496143 HSP90AB3PQ58FF7 597 aa27.48■■□□□ 1.99
PPM1F-208ENST00000496143 DLEC1Q9Y238 1755 aa27.48■■□□□ 1.99
PPM1F-208ENST00000496143 IBTKQ9P2D0 1353 aaPredicted RBP27.48■■□□□ 1.99
PPM1F-208ENST00000496143 ARFGEF1Q9Y6D6 1849 aa27.47■■□□□ 1.99
PPM1F-208ENST00000496143 PARP10Q53GL7 1025 aa27.47■■□□□ 1.99
PPM1F-208ENST00000496143 WDR63Q8IWG1 891 aa27.47■■□□□ 1.99
PPM1F-208ENST00000496143 ZNF622Q969S3 477 aaKnown RBP eCLIP27.47■■□□□ 1.99
PPM1F-208ENST00000496143 NUP98P52948 1817 aa27.46■■□□□ 1.99
PPM1F-208ENST00000496143 ELL2O00472 640 aaPredicted RBP27.46■■□□□ 1.99
PPM1F-208ENST00000496143 GPTP24298 496 aa27.46■■□□□ 1.99
PPM1F-208ENST00000496143 ZNF34Q8IZ26 560 aa27.46■■□□□ 1.99
PPM1F-208ENST00000496143 ZNF784Q8NCA9 323 aaPredicted RBP27.46■■□□□ 1.99
PPM1F-208ENST00000496143 SALL2Q9Y467 1007 aaPredicted RBP27.46■■□□□ 1.99
PPM1F-208ENST00000496143 ANKRD31Q8N7Z5 1873 aa27.46■■□□□ 1.99
PPM1F-208ENST00000496143 PPP1R42Q7Z4L9 355 aa27.45■■□□□ 1.98
PPM1F-208ENST00000496143 TSR2Q969E8 191 aaKnown RBP27.45■■□□□ 1.98
PPM1F-208ENST00000496143 STYK1Q6J9G0 422 aa27.44■■□□□ 1.98
PPM1F-208ENST00000496143 C8orf58Q8NAV2 365 aa27.44■■□□□ 1.98
PPM1F-208ENST00000496143 CNKSR1Q969H4 720 aa27.44■■□□□ 1.98
PPM1F-208ENST00000496143 SRGNP10124 158 aa27.43■■□□□ 1.98
PPM1F-208ENST00000496143 CCDC30Q5VVM6 783 aa27.43■■□□□ 1.98
PPM1F-208ENST00000496143 MASTLQ96GX5 879 aa27.43■■□□□ 1.98
PPM1F-208ENST00000496143 UBN2Q6ZU65 1347 aa27.42■■□□□ 1.98
PPM1F-208ENST00000496143 PLBD2Q8NHP8 589 aa27.42■■□□□ 1.98
PPM1F-208ENST00000496143 CCER2I3L3R5 266 aa27.41■■□□□ 1.98
PPM1F-208ENST00000496143 SUSD4Q5VX71 490 aa27.41■■□□□ 1.98
PPM1F-208ENST00000496143 ANKRD13DQ6ZTN6 518 aa27.41■■□□□ 1.98
PPM1F-208ENST00000496143 KLRG2A4D1S0 409 aaPredicted RBP27.4■■□□□ 1.98
PPM1F-208ENST00000496143 NPR1P16066 1061 aa27.4■■□□□ 1.98
PPM1F-208ENST00000496143 RNF123Q5XPI4 1314 aa27.4■■□□□ 1.98
PPM1F-208ENST00000496143 COL11A2P13942 1736 aaPredicted RBP27.39■■□□□ 1.98
PPM1F-208ENST00000496143 GOLGA2Q08379 1002 aa27.39■■□□□ 1.98
PPM1F-208ENST00000496143 TCIRG1Q13488 830 aa27.39■■□□□ 1.98
PPM1F-208ENST00000496143 NUTM1Q86Y26 1132 aa27.39■■□□□ 1.98
PPM1F-208ENST00000496143 UTP14AQ9BVJ6 771 aaKnown RBP27.39■■□□□ 1.98
PPM1F-208ENST00000496143 NTSR2O95665 410 aa27.38■■□□□ 1.97
PPM1F-208ENST00000496143 TWISTNBQ3B726 338 aaPredicted RBP27.38■■□□□ 1.97
PPM1F-208ENST00000496143 ERFEQ4G0M1 354 aa27.38■■□□□ 1.97
PPM1F-208ENST00000496143 STK31Q9BXU1 1019 aa27.38■■□□□ 1.97
PPM1F-208ENST00000496143 RIC1Q4ADV7 1423 aa27.38■■□□□ 1.97
PPM1F-208ENST00000496143 FANCIQ9NVI1 1328 aa27.38■■□□□ 1.97
PPM1F-208ENST00000496143 ADCY9O60503 1353 aa27.37■■□□□ 1.97
PPM1F-208ENST00000496143 TSPYL6Q8N831 410 aa27.37■■□□□ 1.97
PPM1F-208ENST00000496143 MYH16Q9H6N6 1097 aa27.37■■□□□ 1.97
PPM1F-208ENST00000496143 SOGA3Q5TF21 947 aa27.36■■□□□ 1.97
PPM1F-208ENST00000496143 ABCC12Q96J65 1359 aa27.35■■□□□ 1.97
PPM1F-208ENST00000496143 PRPF40BQ6NWY9 871 aaKnown RBP27.35■■□□□ 1.97
PPM1F-208ENST00000496143 NLRP10Q86W26 655 aa27.35■■□□□ 1.97
PPM1F-208ENST00000496143 ANKRD36CQ5JPF3 1778 aa27.35■■□□□ 1.97
PPM1F-208ENST00000496143 DDX58O95786 925 aaKnown RBP27.34■■□□□ 1.97
PPM1F-208ENST00000496143 ALDH1B1P30837 517 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms