RNA–Protein interactions for RNA: ENST00000496015.5

ABCD4-217, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 1,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-217ENST00000496015 ZNF622Q969S3 477 aaKnown RBP eCLIP17.9■□□□□ 0.46
ABCD4-217ENST00000496015 TPTE2Q6XPS3 522 aa17.89■□□□□ 0.45
ABCD4-217ENST00000496015 RUNDC1Q96C34 613 aa17.89■□□□□ 0.45
ABCD4-217ENST00000496015 RNF181Q9P0P0 153 aa17.89■□□□□ 0.45
ABCD4-217ENST00000496015 NIP7Q9Y221 180 aaKnown RBP eCLIP17.89■□□□□ 0.45
ABCD4-217ENST00000496015 CEP350Q5VT06 3117 aa17.89■□□□□ 0.45
ABCD4-217ENST00000496015 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
ABCD4-217ENST00000496015 KIF6Q6ZMV9 814 aa17.88■□□□□ 0.45
ABCD4-217ENST00000496015 CCDC146Q8IYE0 955 aa17.88■□□□□ 0.45
ABCD4-217ENST00000496015 CCDC24Q8N4L8 307 aa17.88■□□□□ 0.45
ABCD4-217ENST00000496015 NGEFQ8N5V2 710 aa17.88■□□□□ 0.45
ABCD4-217ENST00000496015 PRKRIP1Q9H875 184 aaPredicted RBP17.88■□□□□ 0.45
ABCD4-217ENST00000496015 RRP7AQ9Y3A4 280 aaKnown RBP17.88■□□□□ 0.45
ABCD4-217ENST00000496015 CNKSR1Q969H4 720 aa17.87■□□□□ 0.45
ABCD4-217ENST00000496015 ERBB4Q15303 1308 aa17.87■□□□□ 0.45
ABCD4-217ENST00000496015 ERVV-1B6SEH8 477 aa17.86■□□□□ 0.45
ABCD4-217ENST00000496015 MYL6BP14649 208 aa17.86■□□□□ 0.45
ABCD4-217ENST00000496015 GTF2E1P29083 439 aaPredicted RBP17.86■□□□□ 0.45
ABCD4-217ENST00000496015 STYK1Q6J9G0 422 aa17.86■□□□□ 0.45
ABCD4-217ENST00000496015 ADAMTS8Q9UP79 889 aa17.86■□□□□ 0.45
ABCD4-217ENST00000496015 KDM2BQ8NHM5 1336 aa17.86■□□□□ 0.45
ABCD4-217ENST00000496015 NUP98P52948 1817 aa17.86■□□□□ 0.45
ABCD4-217ENST00000496015 CCDC88AQ3V6T2 1871 aa17.86■□□□□ 0.45
ABCD4-217ENST00000496015 COL11A2P13942 1736 aaPredicted RBP17.85■□□□□ 0.45
ABCD4-217ENST00000496015 LMNB1P20700 586 aa17.85■□□□□ 0.45
ABCD4-217ENST00000496015 MASTLQ96GX5 879 aa17.85■□□□□ 0.45
ABCD4-217ENST00000496015 ZC3H4Q9UPT8 1303 aaKnown RBP17.85■□□□□ 0.45
ABCD4-217ENST00000496015 MAP3K15Q6ZN16 1313 aa17.84■□□□□ 0.45
ABCD4-217ENST00000496015 SRGNP10124 158 aa17.84■□□□□ 0.45
ABCD4-217ENST00000496015 NYXQ9GZU5 481 aa17.84■□□□□ 0.45
ABCD4-217ENST00000496015 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
ABCD4-217ENST00000496015 FAM177BA6PVY3 158 aa17.83■□□□□ 0.44
ABCD4-217ENST00000496015 KIF3CO14782 793 aa17.83■□□□□ 0.44
ABCD4-217ENST00000496015 RASSF7Q02833 373 aa17.83■□□□□ 0.44
ABCD4-217ENST00000496015 HLFQ16534 295 aa17.83■□□□□ 0.44
ABCD4-217ENST00000496015 SOGA3Q5TF21 947 aa17.83■□□□□ 0.44
ABCD4-217ENST00000496015 C21orf2O43822 256 aa17.82■□□□□ 0.44
ABCD4-217ENST00000496015 EIF2S2P20042 333 aaKnown RBP17.82■□□□□ 0.44
ABCD4-217ENST00000496015 C16orf71Q8IYS4 520 aaPredicted RBP17.82■□□□□ 0.44
ABCD4-217ENST00000496015 ZNF219Q9P2Y4 722 aaPredicted RBP17.82■□□□□ 0.44
ABCD4-217ENST00000496015 LAS1LQ9Y4W2 734 aaKnown RBP17.82■□□□□ 0.44
ABCD4-217ENST00000496015 ARFGEF2Q9Y6D5 1785 aa17.81■□□□□ 0.44
ABCD4-217ENST00000496015 TOMM70O94826 608 aa17.81■□□□□ 0.44
ABCD4-217ENST00000496015 NPR1P16066 1061 aa17.81■□□□□ 0.44
ABCD4-217ENST00000496015 PRPF40BQ6NWY9 871 aaKnown RBP17.81■□□□□ 0.44
ABCD4-217ENST00000496015 NMRK2Q9NPI5 230 aa17.81■□□□□ 0.44
ABCD4-217ENST00000496015 SLX4Q8IY92 1834 aa17.81■□□□□ 0.44
ABCD4-217ENST00000496015 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
ABCD4-217ENST00000496015 CHL1O00533 1208 aa17.8■□□□□ 0.44
ABCD4-217ENST00000496015 TTLL7Q6ZT98 887 aa17.8■□□□□ 0.44
ABCD4-217ENST00000496015 ZBTB3Q9H5J0 574 aa17.8■□□□□ 0.44
ABCD4-217ENST00000496015 TRIM35Q9UPQ4 493 aa17.8■□□□□ 0.44
ABCD4-217ENST00000496015 KLRG2A4D1S0 409 aaPredicted RBP17.79■□□□□ 0.44
ABCD4-217ENST00000496015 NFKBIEO00221 500 aa17.79■□□□□ 0.44
ABCD4-217ENST00000496015 DICER1Q9UPY3 1922 aaKnown RBP17.78■□□□□ 0.44
ABCD4-217ENST00000496015 TNRC6CQ9HCJ0 1690 aaKnown RBP17.78■□□□□ 0.44
ABCD4-217ENST00000496015 HSPA6P17066 643 aa17.78■□□□□ 0.44
ABCD4-217ENST00000496015 CALD1Q05682 793 aaKnown RBP17.78■□□□□ 0.44
ABCD4-217ENST00000496015 GIGYF2Q6Y7W6 1299 aaKnown RBP17.78■□□□□ 0.44
ABCD4-217ENST00000496015 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
ABCD4-217ENST00000496015 GPTP24298 496 aa17.77■□□□□ 0.44
ABCD4-217ENST00000496015 ALDH1B1P30837 517 aa17.77■□□□□ 0.44
ABCD4-217ENST00000496015 PPP1R42Q7Z4L9 355 aa17.77■□□□□ 0.44
ABCD4-217ENST00000496015 TIAM2Q8IVF5 1701 aa17.77■□□□□ 0.44
ABCD4-217ENST00000496015 LTBP3Q9NS15 1303 aa17.76■□□□□ 0.43
ABCD4-217ENST00000496015 ERFEQ4G0M1 354 aa17.76■□□□□ 0.43
ABCD4-217ENST00000496015 PARP10Q53GL7 1025 aa17.76■□□□□ 0.43
ABCD4-217ENST00000496015 DPY19L2Q6NUT2 758 aa17.76■□□□□ 0.43
ABCD4-217ENST00000496015 CFAP44Q96MT7 982 aa17.76■□□□□ 0.43
ABCD4-217ENST00000496015 RRAGCQ9HB90 399 aa17.76■□□□□ 0.43
ABCD4-217ENST00000496015 IBTKQ9P2D0 1353 aaPredicted RBP17.76■□□□□ 0.43
ABCD4-217ENST00000496015 GLTPD2A6NH11 291 aa17.75■□□□□ 0.43
ABCD4-217ENST00000496015 APAF1O14727 1248 aa17.75■□□□□ 0.43
ABCD4-217ENST00000496015 HOXB7P09629 217 aa17.75■□□□□ 0.43
ABCD4-217ENST00000496015 PDIA6Q15084 440 aa17.75■□□□□ 0.43
ABCD4-217ENST00000496015 CCDC93Q567U6 631 aa17.75■□□□□ 0.43
ABCD4-217ENST00000496015 NUTM1Q86Y26 1132 aa17.75■□□□□ 0.43
ABCD4-217ENST00000496015 ZNF34Q8IZ26 560 aa17.75■□□□□ 0.43
ABCD4-217ENST00000496015 RBM46Q8TBY0 533 aaKnown RBP17.75■□□□□ 0.43
ABCD4-217ENST00000496015 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
ABCD4-217ENST00000496015 DDX21Q9NR30 783 aaKnown RBP eCLIP17.75■□□□□ 0.43
ABCD4-217ENST00000496015 PRELPP51888 382 aa17.74■□□□□ 0.43
ABCD4-217ENST00000496015 PROSER3Q2NL68 480 aa17.74■□□□□ 0.43
ABCD4-217ENST00000496015 HSP90AB3PQ58FF7 597 aa17.74■□□□□ 0.43
ABCD4-217ENST00000496015 SUSD4Q5VX71 490 aa17.74■□□□□ 0.43
ABCD4-217ENST00000496015 COPS6Q7L5N1 327 aa17.74■□□□□ 0.43
ABCD4-217ENST00000496015 RTKN2Q8IZC4 609 aa17.74■□□□□ 0.43
ABCD4-217ENST00000496015 RPGRQ92834 1020 aaKnown RBP17.74■□□□□ 0.43
ABCD4-217ENST00000496015 ANXA1P04083 346 aa17.73■□□□□ 0.43
ABCD4-217ENST00000496015 VEGFAP15692 232 aaPredicted RBP17.73■□□□□ 0.43
ABCD4-217ENST00000496015 AIMP1Q12904 312 aaKnown RBP17.73■□□□□ 0.43
ABCD4-217ENST00000496015 HDGFL1Q5TGJ6 251 aa17.73■□□□□ 0.43
ABCD4-217ENST00000496015 LRP10Q7Z4F1 713 aa17.73■□□□□ 0.43
ABCD4-217ENST00000496015 C7orf43Q8WVR3 580 aa17.73■□□□□ 0.43
ABCD4-217ENST00000496015 UBN2Q6ZU65 1347 aa17.72■□□□□ 0.43
ABCD4-217ENST00000496015 CRY2Q49AN0 593 aa17.72■□□□□ 0.43
ABCD4-217ENST00000496015 XAGE3Q8WTP9 111 aa17.72■□□□□ 0.43
ABCD4-217ENST00000496015 UTP14AQ9BVJ6 771 aaKnown RBP17.72■□□□□ 0.43
ABCD4-217ENST00000496015 DBF4Q9UBU7 674 aaPredicted RBP17.72■□□□□ 0.43
ABCD4-217ENST00000496015 RIC1Q4ADV7 1423 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms