RNA–Protein interactions for RNA: ENST00000495822.1

CTSL-206, Transcript of cathepsin L, humanhuman

TSL 1 (best)

Gene CTSL, Length 988 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-206ENST00000495822 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.744e-7■■□□□ 11.9
CTSL-206ENST00000495822 MIS18AQ9NYP9 233 aa19.68■□□□□ 0.74
CTSL-206ENST00000495822 EIF4A1P60842 406 aaKnown RBP19.67■□□□□ 0.74
CTSL-206ENST00000495822 NBPF5PQ86XG9 351 aaPredicted RBP19.67■□□□□ 0.74
CTSL-206ENST00000495822 RBM46Q8TBY0 533 aaKnown RBP19.67■□□□□ 0.74
CTSL-206ENST00000495822 CEP350Q5VT06 3117 aa19.67■□□□□ 0.74
CTSL-206ENST00000495822 NFKBIEO00221 500 aa19.66■□□□□ 0.74
CTSL-206ENST00000495822 SRGNP10124 158 aa19.66■□□□□ 0.74
CTSL-206ENST00000495822 ARFGEF2Q9Y6D5 1785 aa19.65■□□□□ 0.74
CTSL-206ENST00000495822 FER1L6Q2WGJ9 1857 aa19.65■□□□□ 0.74
CTSL-206ENST00000495822 SOGA3Q5TF21 947 aa19.65■□□□□ 0.74
CTSL-206ENST00000495822 TPTE2Q6XPS3 522 aa19.65■□□□□ 0.74
CTSL-206ENST00000495822 C16orf71Q8IYS4 520 aaPredicted RBP19.65■□□□□ 0.74
CTSL-206ENST00000495822 CCDC24Q8N4L8 307 aa19.65■□□□□ 0.74
CTSL-206ENST00000495822 MASTLQ96GX5 879 aa19.65■□□□□ 0.74
CTSL-206ENST00000495822 BABAM1Q9NWV8 329 aa19.65■□□□□ 0.74
CTSL-206ENST00000495822 NIP7Q9Y221 180 aaKnown RBP eCLIP19.65■□□□□ 0.74
CTSL-206ENST00000495822 MYBBP1AQ9BQG0 1328 aaKnown RBP19.65■□□□□ 0.74
CTSL-206ENST00000495822 LTBP3Q9NS15 1303 aa19.65■□□□□ 0.74
CTSL-206ENST00000495822 KLRG2A4D1S0 409 aaPredicted RBP19.64■□□□□ 0.73
CTSL-206ENST00000495822 ERVV-1B6SEH8 477 aa19.64■□□□□ 0.73
CTSL-206ENST00000495822 APLP1P51693 650 aa19.64■□□□□ 0.73
CTSL-206ENST00000495822 PRELPP51888 382 aa19.64■□□□□ 0.73
CTSL-206ENST00000495822 THUMPD2Q9BTF0 503 aaKnown RBP19.64■□□□□ 0.73
CTSL-206ENST00000495822 ERBB4Q15303 1308 aa19.64■□□□□ 0.73
CTSL-206ENST00000495822 TIAM2Q8IVF5 1701 aa19.63■□□□□ 0.73
CTSL-206ENST00000495822 GLTPD2A6NH11 291 aa19.63■□□□□ 0.73
CTSL-206ENST00000495822 LMOD3Q0VAK6 560 aa19.63■□□□□ 0.73
CTSL-206ENST00000495822 C21orf2O43822 256 aa19.62■□□□□ 0.73
CTSL-206ENST00000495822 FSTL1Q12841 308 aa19.62■□□□□ 0.73
CTSL-206ENST00000495822 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
CTSL-206ENST00000495822 PRPF40BQ6NWY9 871 aaKnown RBP19.62■□□□□ 0.73
CTSL-206ENST00000495822 CCDC88AQ3V6T2 1871 aa19.62■□□□□ 0.73
CTSL-206ENST00000495822 DICER1Q9UPY3 1922 aaKnown RBP19.61■□□□□ 0.73
CTSL-206ENST00000495822 MAP3K15Q6ZN16 1313 aa19.61■□□□□ 0.73
CTSL-206ENST00000495822 SLX4Q8IY92 1834 aa19.61■□□□□ 0.73
CTSL-206ENST00000495822 NPR1P16066 1061 aa19.61■□□□□ 0.73
CTSL-206ENST00000495822 RIPK4P57078 832 aa19.61■□□□□ 0.73
CTSL-206ENST00000495822 TAOK3Q9H2K8 898 aa19.61■□□□□ 0.73
CTSL-206ENST00000495822 TMPOP42166 694 aaKnown RBP19.6■□□□□ 0.73
CTSL-206ENST00000495822 HLFQ16534 295 aa19.6■□□□□ 0.73
CTSL-206ENST00000495822 KIF6Q6ZMV9 814 aa19.6■□□□□ 0.73
CTSL-206ENST00000495822 RRAGCQ9HB90 399 aa19.6■□□□□ 0.73
CTSL-206ENST00000495822 TSPYL4Q9UJ04 414 aa19.6■□□□□ 0.73
CTSL-206ENST00000495822 IBTKQ9P2D0 1353 aaPredicted RBP19.59■□□□□ 0.73
CTSL-206ENST00000495822 NYXQ9GZU5 481 aa19.59■□□□□ 0.73
CTSL-206ENST00000495822 CACNA1SQ13698 1873 aa19.58■□□□□ 0.73
CTSL-206ENST00000495822 NUP98P52948 1817 aa19.58■□□□□ 0.73
CTSL-206ENST00000495822 DPY19L2Q6NUT2 758 aa19.58■□□□□ 0.72
CTSL-206ENST00000495822 C7orf43Q8WVR3 580 aa19.58■□□□□ 0.72
CTSL-206ENST00000495822 RIC1Q4ADV7 1423 aa19.58■□□□□ 0.72
CTSL-206ENST00000495822 VEGFAP15692 232 aaPredicted RBP19.57■□□□□ 0.72
CTSL-206ENST00000495822 ERFEQ4G0M1 354 aa19.57■□□□□ 0.72
CTSL-206ENST00000495822 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
CTSL-206ENST00000495822 RRP7AQ9Y3A4 280 aaKnown RBP19.57■□□□□ 0.72
CTSL-206ENST00000495822 WDR90Q96KV7 1748 aa19.56■□□□□ 0.72
CTSL-206ENST00000495822 GTF2E1P29083 439 aaPredicted RBP19.56■□□□□ 0.72
CTSL-206ENST00000495822 CCDC93Q567U6 631 aa19.56■□□□□ 0.72
CTSL-206ENST00000495822 NGEFQ8N5V2 710 aa19.56■□□□□ 0.72
CTSL-206ENST00000495822 SMC1BQ8NDV3 1235 aa19.56■□□□□ 0.72
CTSL-206ENST00000495822 MYL6BP14649 208 aa19.55■□□□□ 0.72
CTSL-206ENST00000495822 ALDH1B1P30837 517 aa19.55■□□□□ 0.72
CTSL-206ENST00000495822 CRY2Q49AN0 593 aa19.55■□□□□ 0.72
CTSL-206ENST00000495822 TTLL7Q6ZT98 887 aa19.55■□□□□ 0.72
CTSL-206ENST00000495822 RUNDC1Q96C34 613 aa19.55■□□□□ 0.72
CTSL-206ENST00000495822 WDR43Q15061 677 aaKnown RBP eCLIP19.54■□□□□ 0.72
CTSL-206ENST00000495822 GIGYF2Q6Y7W6 1299 aaKnown RBP19.54■□□□□ 0.72
CTSL-206ENST00000495822 LRP10Q7Z4F1 713 aa19.54■□□□□ 0.72
CTSL-206ENST00000495822 ABCC12Q96J65 1359 aa19.53■□□□□ 0.72
CTSL-206ENST00000495822 UBN2Q6ZU65 1347 aa19.52■□□□□ 0.72
CTSL-206ENST00000495822 FAM177BA6PVY3 158 aa19.52■□□□□ 0.72
CTSL-206ENST00000495822 PDIA6Q15084 440 aa19.52■□□□□ 0.72
CTSL-206ENST00000495822 PARP10Q53GL7 1025 aa19.52■□□□□ 0.72
CTSL-206ENST00000495822 ZNF34Q8IZ26 560 aa19.52■□□□□ 0.72
CTSL-206ENST00000495822 RTKN2Q8IZC4 609 aa19.52■□□□□ 0.72
CTSL-206ENST00000495822 ZBTB3Q9H5J0 574 aa19.52■□□□□ 0.72
CTSL-206ENST00000495822 CHL1O00533 1208 aa19.51■□□□□ 0.71
CTSL-206ENST00000495822 FKBP4Q02790 459 aaKnown RBP eCLIP19.51■□□□□ 0.71
CTSL-206ENST00000495822 DNAJC5GQ8N7S2 189 aa19.51■□□□□ 0.71
CTSL-206ENST00000495822 PRKRIP1Q9H875 184 aaPredicted RBP19.51■□□□□ 0.71
CTSL-206ENST00000495822 POTECB2RU33 542 aa19.5■□□□□ 0.71
CTSL-206ENST00000495822 EIF2S2P20042 333 aaKnown RBP19.5■□□□□ 0.71
CTSL-206ENST00000495822 HOXA10P31260 410 aaPredicted RBP19.5■□□□□ 0.71
CTSL-206ENST00000495822 PPP1R42Q7Z4L9 355 aa19.5■□□□□ 0.71
CTSL-206ENST00000495822 NUTM1Q86Y26 1132 aa19.5■□□□□ 0.71
CTSL-206ENST00000495822 CCDC146Q8IYE0 955 aa19.5■□□□□ 0.71
CTSL-206ENST00000495822 TRIM35Q9UPQ4 493 aa19.5■□□□□ 0.71
CTSL-206ENST00000495822 NTSR2O95665 410 aa19.49■□□□□ 0.71
CTSL-206ENST00000495822 GPTP24298 496 aa19.49■□□□□ 0.71
CTSL-206ENST00000495822 SUSD4Q5VX71 490 aa19.49■□□□□ 0.71
CTSL-206ENST00000495822 CC2D2BQ6DHV5 1058 aa19.49■□□□□ 0.71
CTSL-206ENST00000495822 ADAMTS8Q9UP79 889 aa19.49■□□□□ 0.71
CTSL-206ENST00000495822 SNED1Q8TER0 1413 aa19.49■□□□□ 0.71
CTSL-206ENST00000495822 RNF123Q5XPI4 1314 aa19.49■□□□□ 0.71
CTSL-206ENST00000495822 HOXB7P09629 217 aa19.48■□□□□ 0.71
CTSL-206ENST00000495822 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
CTSL-206ENST00000495822 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
CTSL-206ENST00000495822 PROSER3Q2NL68 480 aa19.47■□□□□ 0.71
CTSL-206ENST00000495822 HSP90AB3PQ58FF7 597 aa19.47■□□□□ 0.71
CTSL-206ENST00000495822 RPGRQ92834 1020 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms