RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 PDE6BP35913 854 aa18.72■□□□□ 0.59
RPRD1B-206ENST00000495457 TRIM35Q9UPQ4 493 aa18.72■□□□□ 0.59
RPRD1B-206ENST00000495457 TTLL7Q6ZT98 887 aa18.71■□□□□ 0.59
RPRD1B-206ENST00000495457 ZNF622Q969S3 477 aaKnown RBP eCLIP18.71■□□□□ 0.59
RPRD1B-206ENST00000495457 NIP7Q9Y221 180 aaKnown RBP eCLIP18.71■□□□□ 0.59
RPRD1B-206ENST00000495457 ST5P78524 1137 aa18.7■□□□□ 0.58
RPRD1B-206ENST00000495457 RASSF7Q02833 373 aa18.7■□□□□ 0.58
RPRD1B-206ENST00000495457 NBPF5PQ86XG9 351 aaPredicted RBP18.7■□□□□ 0.58
RPRD1B-206ENST00000495457 ANKRD31Q8N7Z5 1873 aa18.7■□□□□ 0.58
RPRD1B-206ENST00000495457 FAM177BA6PVY3 158 aa18.69■□□□□ 0.58
RPRD1B-206ENST00000495457 RGL2O15211 777 aa18.69■□□□□ 0.58
RPRD1B-206ENST00000495457 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
RPRD1B-206ENST00000495457 BABAM1Q9NWV8 329 aa18.69■□□□□ 0.58
RPRD1B-206ENST00000495457 RNF181Q9P0P0 153 aa18.69■□□□□ 0.58
RPRD1B-206ENST00000495457 DLEC1Q9Y238 1755 aa18.68■□□□□ 0.58
RPRD1B-206ENST00000495457 PRELPP51888 382 aa18.68■□□□□ 0.58
RPRD1B-206ENST00000495457 PDZRN3Q9UPQ7 1066 aa18.68■□□□□ 0.58
RPRD1B-206ENST00000495457 MAP3K15Q6ZN16 1313 aa18.68■□□□□ 0.58
RPRD1B-206ENST00000495457 COL11A2P13942 1736 aaPredicted RBP18.67■□□□□ 0.58
RPRD1B-206ENST00000495457 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
RPRD1B-206ENST00000495457 KRT24Q2M2I5 525 aa18.67■□□□□ 0.58
RPRD1B-206ENST00000495457 ZBTB3Q9H5J0 574 aa18.67■□□□□ 0.58
RPRD1B-206ENST00000495457 ZNF219Q9P2Y4 722 aaPredicted RBP18.67■□□□□ 0.58
RPRD1B-206ENST00000495457 LAS1LQ9Y4W2 734 aaKnown RBP18.67■□□□□ 0.58
RPRD1B-206ENST00000495457 ERVV-1B6SEH8 477 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 CHL1O00533 1208 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 KIF3CO14782 793 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 ANXA1P04083 346 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 SRGNP10124 158 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 PDIA6Q15084 440 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 PROSER3Q2NL68 480 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 TPTE2Q6XPS3 522 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 KIF6Q6ZMV9 814 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 LRP10Q7Z4F1 713 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 ERBB4Q15303 1308 aa18.66■□□□□ 0.58
RPRD1B-206ENST00000495457 NFKBIEO00221 500 aa18.65■□□□□ 0.58
RPRD1B-206ENST00000495457 C21orf2O43822 256 aa18.65■□□□□ 0.58
RPRD1B-206ENST00000495457 NECTIN2Q92692 538 aa18.65■□□□□ 0.58
RPRD1B-206ENST00000495457 APAF1O14727 1248 aa18.64■□□□□ 0.57
RPRD1B-206ENST00000495457 GPTP24298 496 aa18.64■□□□□ 0.57
RPRD1B-206ENST00000495457 STYK1Q6J9G0 422 aa18.64■□□□□ 0.57
RPRD1B-206ENST00000495457 MASTLQ96GX5 879 aa18.64■□□□□ 0.57
RPRD1B-206ENST00000495457 NMRK2Q9NPI5 230 aa18.64■□□□□ 0.57
RPRD1B-206ENST00000495457 PRPF40BQ6NWY9 871 aaKnown RBP18.63■□□□□ 0.57
RPRD1B-206ENST00000495457 CNKSR1Q969H4 720 aa18.63■□□□□ 0.57
RPRD1B-206ENST00000495457 UBN2Q6ZU65 1347 aa18.63■□□□□ 0.57
RPRD1B-206ENST00000495457 ZNF316A6NFI3 1004 aaPredicted RBP18.62■□□□□ 0.57
RPRD1B-206ENST00000495457 LMNB1P20700 586 aa18.62■□□□□ 0.57
RPRD1B-206ENST00000495457 NUTM1Q86Y26 1132 aa18.62■□□□□ 0.57
RPRD1B-206ENST00000495457 ABCC12Q96J65 1359 aa18.61■□□□□ 0.57
RPRD1B-206ENST00000495457 KLRG2A4D1S0 409 aaPredicted RBP18.61■□□□□ 0.57
RPRD1B-206ENST00000495457 GTF2E1P29083 439 aaPredicted RBP18.61■□□□□ 0.57
RPRD1B-206ENST00000495457 NPR1P16066 1061 aa18.6■□□□□ 0.57
RPRD1B-206ENST00000495457 ERFEQ4G0M1 354 aa18.6■□□□□ 0.57
RPRD1B-206ENST00000495457 SUSD4Q5VX71 490 aa18.6■□□□□ 0.57
RPRD1B-206ENST00000495457 GIGYF2Q6Y7W6 1299 aaKnown RBP18.6■□□□□ 0.57
RPRD1B-206ENST00000495457 ZNF34Q8IZ26 560 aa18.6■□□□□ 0.57
RPRD1B-206ENST00000495457 CFAP44Q96MT7 982 aa18.6■□□□□ 0.57
RPRD1B-206ENST00000495457 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
RPRD1B-206ENST00000495457 NYXQ9GZU5 481 aa18.59■□□□□ 0.57
RPRD1B-206ENST00000495457 AIMP1Q12904 312 aaKnown RBP18.58■□□□□ 0.56
RPRD1B-206ENST00000495457 XAGE3Q8WTP9 111 aa18.58■□□□□ 0.56
RPRD1B-206ENST00000495457 C7orf43Q8WVR3 580 aa18.58■□□□□ 0.56
RPRD1B-206ENST00000495457 MBIPQ9NS73 344 aa18.58■□□□□ 0.56
RPRD1B-206ENST00000495457 CHPF2Q9P2E5 772 aa18.58■□□□□ 0.56
RPRD1B-206ENST00000495457 SBF1O95248 1867 aa18.58■□□□□ 0.56
RPRD1B-206ENST00000495457 SLX4Q8IY92 1834 aa18.58■□□□□ 0.56
RPRD1B-206ENST00000495457 KDM2BQ8NHM5 1336 aa18.57■□□□□ 0.56
RPRD1B-206ENST00000495457 ZNF853P0CG23 659 aa18.57■□□□□ 0.56
RPRD1B-206ENST00000495457 HDGFL1Q5TGJ6 251 aa18.57■□□□□ 0.56
RPRD1B-206ENST00000495457 TAOK3Q9H2K8 898 aa18.57■□□□□ 0.56
RPRD1B-206ENST00000495457 DDX21Q9NR30 783 aaKnown RBP eCLIP18.57■□□□□ 0.56
RPRD1B-206ENST00000495457 TNRC6CQ9HCJ0 1690 aaKnown RBP18.57■□□□□ 0.56
RPRD1B-206ENST00000495457 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
RPRD1B-206ENST00000495457 NUP98P52948 1817 aa18.56■□□□□ 0.56
RPRD1B-206ENST00000495457 ZC3H4Q9UPT8 1303 aaKnown RBP18.56■□□□□ 0.56
RPRD1B-206ENST00000495457 NTSR2O95665 410 aa18.56■□□□□ 0.56
RPRD1B-206ENST00000495457 OLFM4Q6UX06 510 aa18.56■□□□□ 0.56
RPRD1B-206ENST00000495457 RRAGCQ9HB90 399 aa18.56■□□□□ 0.56
RPRD1B-206ENST00000495457 TOMM70O94826 608 aa18.55■□□□□ 0.56
RPRD1B-206ENST00000495457 CRY2Q49AN0 593 aa18.55■□□□□ 0.56
RPRD1B-206ENST00000495457 DUSP27Q5VZP5 1158 aa18.55■□□□□ 0.56
RPRD1B-206ENST00000495457 IFT57Q9NWB7 429 aa18.55■□□□□ 0.56
RPRD1B-206ENST00000495457 LTBP3Q9NS15 1303 aa18.54■□□□□ 0.56
RPRD1B-206ENST00000495457 HOXB7P09629 217 aa18.54■□□□□ 0.56
RPRD1B-206ENST00000495457 PARP10Q53GL7 1025 aa18.54■□□□□ 0.56
RPRD1B-206ENST00000495457 CCDC93Q567U6 631 aa18.54■□□□□ 0.56
RPRD1B-206ENST00000495457 SOGA3Q5TF21 947 aa18.54■□□□□ 0.56
RPRD1B-206ENST00000495457 GLTPD2A6NH11 291 aa18.53■□□□□ 0.56
RPRD1B-206ENST00000495457 ANP32CO43423 234 aa18.53■□□□□ 0.56
RPRD1B-206ENST00000495457 HSPA6P17066 643 aa18.53■□□□□ 0.56
RPRD1B-206ENST00000495457 ALDH1B1P30837 517 aa18.53■□□□□ 0.56
RPRD1B-206ENST00000495457 CACNA1SQ13698 1873 aa18.53■□□□□ 0.56
RPRD1B-206ENST00000495457 C3orf67Q6ZVT6 689 aa18.53■□□□□ 0.56
RPRD1B-206ENST00000495457 PPP1R42Q7Z4L9 355 aa18.53■□□□□ 0.56
RPRD1B-206ENST00000495457 FER1L6Q2WGJ9 1857 aa18.52■□□□□ 0.56
RPRD1B-206ENST00000495457 RIC1Q4ADV7 1423 aa18.52■□□□□ 0.56
RPRD1B-206ENST00000495457 ELL2O00472 640 aaPredicted RBP18.52■□□□□ 0.56
RPRD1B-206ENST00000495457 GNAI1P63096 354 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms