RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
VTI1A-208ENST00000494728 BRIP1Q9BX63 1249 aa15.43■□□□□ 0.06
VTI1A-208ENST00000494728 MAPK8IP3Q9UPT6 1336 aa15.43■□□□□ 0.06
VTI1A-208ENST00000494728 RALBP1Q15311 655 aa15.42■□□□□ 0.06
VTI1A-208ENST00000494728 ZNF219Q9P2Y4 722 aaPredicted RBP15.42■□□□□ 0.06
VTI1A-208ENST00000494728 LAMB2P55268 1798 aa15.41■□□□□ 0.06
VTI1A-208ENST00000494728 ABCC12Q96J65 1359 aa15.41■□□□□ 0.06
VTI1A-208ENST00000494728 HSPA6P17066 643 aa15.41■□□□□ 0.06
VTI1A-208ENST00000494728 ZNF622Q969S3 477 aaKnown RBP eCLIP15.41■□□□□ 0.06
VTI1A-208ENST00000494728 MYBBP1AQ9BQG0 1328 aaKnown RBP15.41■□□□□ 0.06
VTI1A-208ENST00000494728 PDE6BP35913 854 aa15.4■□□□□ 0.06
VTI1A-208ENST00000494728 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
VTI1A-208ENST00000494728 RRP7AQ9Y3A4 280 aaKnown RBP15.4■□□□□ 0.06
VTI1A-208ENST00000494728 C21orf2O43822 256 aa15.39■□□□□ 0.05
VTI1A-208ENST00000494728 NEFMP07197 916 aa15.39■□□□□ 0.05
VTI1A-208ENST00000494728 SRGNP10124 158 aa15.39■□□□□ 0.05
VTI1A-208ENST00000494728 CLEC4GQ6UXB4 293 aa15.39■□□□□ 0.05
VTI1A-208ENST00000494728 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
VTI1A-208ENST00000494728 NBPF5PQ86XG9 351 aaPredicted RBP15.39■□□□□ 0.05
VTI1A-208ENST00000494728 CCDC146Q8IYE0 955 aa15.39■□□□□ 0.05
VTI1A-208ENST00000494728 NIP7Q9Y221 180 aaKnown RBP eCLIP15.39■□□□□ 0.05
VTI1A-208ENST00000494728 FAM177BA6PVY3 158 aa15.38■□□□□ 0.05
VTI1A-208ENST00000494728 TOMM70O94826 608 aa15.38■□□□□ 0.05
VTI1A-208ENST00000494728 LMNB1P20700 586 aa15.38■□□□□ 0.05
VTI1A-208ENST00000494728 TMPOP42166 694 aaKnown RBP15.38■□□□□ 0.05
VTI1A-208ENST00000494728 ST5P78524 1137 aa15.38■□□□□ 0.05
VTI1A-208ENST00000494728 PRPF40BQ6NWY9 871 aaKnown RBP15.38■□□□□ 0.05
VTI1A-208ENST00000494728 NGEFQ8N5V2 710 aa15.38■□□□□ 0.05
VTI1A-208ENST00000494728 PNISRQ8TF01 805 aaKnown RBP15.38■□□□□ 0.05
VTI1A-208ENST00000494728 ZNF652Q9Y2D9 606 aa15.38■□□□□ 0.05
VTI1A-208ENST00000494728 MYL6BP14649 208 aa15.37■□□□□ 0.05
VTI1A-208ENST00000494728 RIPK4P57078 832 aa15.37■□□□□ 0.05
VTI1A-208ENST00000494728 LRP10Q7Z4F1 713 aa15.37■□□□□ 0.05
VTI1A-208ENST00000494728 TSPYL4Q9UJ04 414 aa15.37■□□□□ 0.05
VTI1A-208ENST00000494728 UBN2Q6ZU65 1347 aa15.37■□□□□ 0.05
VTI1A-208ENST00000494728 SNED1Q8TER0 1413 aa15.36■□□□□ 0.05
VTI1A-208ENST00000494728 NPHP1O15259 732 aa15.36■□□□□ 0.05
VTI1A-208ENST00000494728 PROSER3Q2NL68 480 aa15.36■□□□□ 0.05
VTI1A-208ENST00000494728 STYK1Q6J9G0 422 aa15.36■□□□□ 0.05
VTI1A-208ENST00000494728 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
VTI1A-208ENST00000494728 SLC51AQ86UW1 340 aa15.36■□□□□ 0.05
VTI1A-208ENST00000494728 RRAGCQ9HB90 399 aa15.36■□□□□ 0.05
VTI1A-208ENST00000494728 MAP3K15Q6ZN16 1313 aa15.36■□□□□ 0.05
VTI1A-208ENST00000494728 KDM2BQ8NHM5 1336 aa15.36■□□□□ 0.05
VTI1A-208ENST00000494728 ZC3H4Q9UPT8 1303 aaKnown RBP15.36■□□□□ 0.05
VTI1A-208ENST00000494728 KLRG2A4D1S0 409 aaPredicted RBP15.35■□□□□ 0.05
VTI1A-208ENST00000494728 RGL2O15211 777 aa15.35■□□□□ 0.05
VTI1A-208ENST00000494728 ANXA1P04083 346 aa15.35■□□□□ 0.05
VTI1A-208ENST00000494728 PDIA6Q15084 440 aa15.35■□□□□ 0.05
VTI1A-208ENST00000494728 KRT24Q2M2I5 525 aa15.35■□□□□ 0.05
VTI1A-208ENST00000494728 ZBTB3Q9H5J0 574 aa15.35■□□□□ 0.05
VTI1A-208ENST00000494728 PDZRN3Q9UPQ7 1066 aa15.35■□□□□ 0.05
VTI1A-208ENST00000494728 TAF1P21675 1872 aa15.35■□□□□ 0.05
VTI1A-208ENST00000494728 NUTM1Q86Y26 1132 aa15.34■□□□□ 0.05
VTI1A-208ENST00000494728 C7orf43Q8WVR3 580 aa15.34■□□□□ 0.05
VTI1A-208ENST00000494728 MASTLQ96GX5 879 aa15.34■□□□□ 0.05
VTI1A-208ENST00000494728 PNNQ9H307 717 aaKnown RBP15.34■□□□□ 0.05
VTI1A-208ENST00000494728 TRIM35Q9UPQ4 493 aa15.34■□□□□ 0.05
VTI1A-208ENST00000494728 LTBP3Q9NS15 1303 aa15.34■□□□□ 0.05
VTI1A-208ENST00000494728 COL4A5P29400 1685 aa15.34■□□□□ 0.05
VTI1A-208ENST00000494728 GPTP24298 496 aa15.33■□□□□ 0.04
VTI1A-208ENST00000494728 HTRA3P83110 453 aa15.33■□□□□ 0.04
VTI1A-208ENST00000494728 NEUROD2Q15784 382 aa15.33■□□□□ 0.04
VTI1A-208ENST00000494728 RBM46Q8TBY0 533 aaKnown RBP15.33■□□□□ 0.04
VTI1A-208ENST00000494728 CNKSR1Q969H4 720 aa15.33■□□□□ 0.04
VTI1A-208ENST00000494728 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.04
VTI1A-208ENST00000494728 PRKRIP1Q9H875 184 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-208ENST00000494728 DDX60Q8IY21 1712 aaKnown RBP15.33■□□□□ 0.04
VTI1A-208ENST00000494728 RIC1Q4ADV7 1423 aa15.33■□□□□ 0.04
VTI1A-208ENST00000494728 GLTPD2A6NH11 291 aa15.32■□□□□ 0.04
VTI1A-208ENST00000494728 POTECB2RU33 542 aa15.32■□□□□ 0.04
VTI1A-208ENST00000494728 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
VTI1A-208ENST00000494728 ERFEQ4G0M1 354 aa15.32■□□□□ 0.04
VTI1A-208ENST00000494728 TPTE2Q6XPS3 522 aa15.32■□□□□ 0.04
VTI1A-208ENST00000494728 ADAMTS8Q9UP79 889 aa15.32■□□□□ 0.04
VTI1A-208ENST00000494728 IBTKQ9P2D0 1353 aaPredicted RBP15.32■□□□□ 0.04
VTI1A-208ENST00000494728 NPR1P16066 1061 aa15.31■□□□□ 0.04
VTI1A-208ENST00000494728 EIF2S2P20042 333 aaKnown RBP15.31■□□□□ 0.04
VTI1A-208ENST00000494728 KIF6Q6ZMV9 814 aa15.31■□□□□ 0.04
VTI1A-208ENST00000494728 C3orf67Q6ZVT6 689 aa15.31■□□□□ 0.04
VTI1A-208ENST00000494728 NECTIN2Q92692 538 aa15.31■□□□□ 0.04
VTI1A-208ENST00000494728 ERBB4Q15303 1308 aa15.31■□□□□ 0.04
VTI1A-208ENST00000494728 NTSR2O95665 410 aa15.3■□□□□ 0.04
VTI1A-208ENST00000494728 SCN4AP35499 1836 aa15.3■□□□□ 0.04
VTI1A-208ENST00000494728 CRY2Q49AN0 593 aa15.3■□□□□ 0.04
VTI1A-208ENST00000494728 SUSD4Q5VX71 490 aa15.3■□□□□ 0.04
VTI1A-208ENST00000494728 ZNF34Q8IZ26 560 aa15.3■□□□□ 0.04
VTI1A-208ENST00000494728 RUNDC1Q96C34 613 aa15.3■□□□□ 0.04
VTI1A-208ENST00000494728 COL4A1P02462 1669 aa15.29■□□□□ 0.04
VTI1A-208ENST00000494728 CHL1O00533 1208 aa15.29■□□□□ 0.04
VTI1A-208ENST00000494728 LMOD3Q0VAK6 560 aa15.29■□□□□ 0.04
VTI1A-208ENST00000494728 C16orf71Q8IYS4 520 aaPredicted RBP15.29■□□□□ 0.04
VTI1A-208ENST00000494728 DNAJC5GQ8N7S2 189 aa15.29■□□□□ 0.04
VTI1A-208ENST00000494728 ADAMTSL1Q8N6G6 1762 aa15.29■□□□□ 0.04
VTI1A-208ENST00000494728 LTBP1Q14766 1721 aa15.29■□□□□ 0.04
VTI1A-208ENST00000494728 APLP1P51693 650 aa15.28■□□□□ 0.04
VTI1A-208ENST00000494728 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04
VTI1A-208ENST00000494728 CCDC93Q567U6 631 aa15.28■□□□□ 0.04
VTI1A-208ENST00000494728 GIGYF2Q6Y7W6 1299 aaKnown RBP15.28■□□□□ 0.04
VTI1A-208ENST00000494728 BABAM1Q9NWV8 329 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms