RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ARFGEF2Q9Y6D5 1785 aa17.25■□□□□ 0.35
ERCC3-209ENST00000494464 CNBD1Q8NA66 436 aa17.25■□□□□ 0.35
ERCC3-209ENST00000494464 CHL1O00533 1208 aa17.24■□□□□ 0.35
ERCC3-209ENST00000494464 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
ERCC3-209ENST00000494464 ERVV-1B6SEH8 477 aa17.23■□□□□ 0.35
ERCC3-209ENST00000494464 MAP3K15Q6ZN16 1313 aa17.22■□□□□ 0.35
ERCC3-209ENST00000494464 H0YIN7 160 aa17.22■□□□□ 0.35
ERCC3-209ENST00000494464 PDE6BP35913 854 aa17.22■□□□□ 0.35
ERCC3-209ENST00000494464 ST5P78524 1137 aa17.22■□□□□ 0.35
ERCC3-209ENST00000494464 C2CD5Q86YS7 1000 aa17.22■□□□□ 0.35
ERCC3-209ENST00000494464 ANKRD36CQ5JPF3 1778 aa17.21■□□□□ 0.35
ERCC3-209ENST00000494464 APAF1O14727 1248 aa17.21■□□□□ 0.35
ERCC3-209ENST00000494464 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
ERCC3-209ENST00000494464 KIF6Q6ZMV9 814 aa17.21■□□□□ 0.35
ERCC3-209ENST00000494464 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
ERCC3-209ENST00000494464 CFAP44Q96MT7 982 aa17.21■□□□□ 0.35
ERCC3-209ENST00000494464 IBTKQ9P2D0 1353 aaPredicted RBP17.21■□□□□ 0.34
ERCC3-209ENST00000494464 SBF1O95248 1867 aa17.2■□□□□ 0.34
ERCC3-209ENST00000494464 CACNA1SQ13698 1873 aa17.2■□□□□ 0.34
ERCC3-209ENST00000494464 MYL6BP14649 208 aa17.2■□□□□ 0.34
ERCC3-209ENST00000494464 HLFQ16534 295 aa17.2■□□□□ 0.34
ERCC3-209ENST00000494464 ARHGAP27Q6ZUM4 889 aa17.2■□□□□ 0.34
ERCC3-209ENST00000494464 NBPF5PQ86XG9 351 aaPredicted RBP17.2■□□□□ 0.34
ERCC3-209ENST00000494464 TTLL6Q8N841 843 aa17.2■□□□□ 0.34
ERCC3-209ENST00000494464 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.34
ERCC3-209ENST00000494464 NPHP1O15259 732 aa17.19■□□□□ 0.34
ERCC3-209ENST00000494464 HOXB7P09629 217 aa17.19■□□□□ 0.34
ERCC3-209ENST00000494464 CALD1Q05682 793 aaKnown RBP17.19■□□□□ 0.34
ERCC3-209ENST00000494464 PDIA6Q15084 440 aa17.19■□□□□ 0.34
ERCC3-209ENST00000494464 TTLL7Q6ZT98 887 aa17.19■□□□□ 0.34
ERCC3-209ENST00000494464 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
ERCC3-209ENST00000494464 EIF2S2P20042 333 aaKnown RBP17.18■□□□□ 0.34
ERCC3-209ENST00000494464 RIC1Q4ADV7 1423 aa17.18■□□□□ 0.34
ERCC3-209ENST00000494464 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
ERCC3-209ENST00000494464 ZNF853P0CG23 659 aa17.17■□□□□ 0.34
ERCC3-209ENST00000494464 TPTE2Q6XPS3 522 aa17.17■□□□□ 0.34
ERCC3-209ENST00000494464 CCDC24Q8N4L8 307 aa17.17■□□□□ 0.34
ERCC3-209ENST00000494464 IFT57Q9NWB7 429 aa17.17■□□□□ 0.34
ERCC3-209ENST00000494464 LAS1LQ9Y4W2 734 aaKnown RBP17.17■□□□□ 0.34
ERCC3-209ENST00000494464 FER1L6Q2WGJ9 1857 aa17.17■□□□□ 0.34
ERCC3-209ENST00000494464 KRT24Q2M2I5 525 aa17.16■□□□□ 0.34
ERCC3-209ENST00000494464 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
ERCC3-209ENST00000494464 TIAM2Q8IVF5 1701 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 KLRG2A4D1S0 409 aaPredicted RBP17.15■□□□□ 0.34
ERCC3-209ENST00000494464 SRGNP10124 158 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 GNAI1P63096 354 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 PROSER3Q2NL68 480 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 STYK1Q6J9G0 422 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 GIGYF2Q6Y7W6 1299 aaKnown RBP17.15■□□□□ 0.34
ERCC3-209ENST00000494464 NYXQ9GZU5 481 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 GPBP1L1Q9HC44 474 aaPredicted RBP17.15■□□□□ 0.34
ERCC3-209ENST00000494464 MBIPQ9NS73 344 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 ZNF622Q969S3 477 aaKnown RBP eCLIP17.15■□□□□ 0.341e-6■■□□□ 12.7
ERCC3-209ENST00000494464 MASTLQ96GX5 879 aa17.15■□□□□ 0.34
ERCC3-209ENST00000494464 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
ERCC3-209ENST00000494464 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
ERCC3-209ENST00000494464 ABCC12Q96J65 1359 aa17.14■□□□□ 0.33
ERCC3-209ENST00000494464 ANXA1P04083 346 aa17.14■□□□□ 0.33
ERCC3-209ENST00000494464 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
ERCC3-209ENST00000494464 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
ERCC3-209ENST00000494464 HDGFL1Q5TGJ6 251 aa17.14■□□□□ 0.33
ERCC3-209ENST00000494464 C9orf131Q5VYM1 1079 aa17.14■□□□□ 0.33
ERCC3-209ENST00000494464 ZNF34Q8IZ26 560 aa17.14■□□□□ 0.33
ERCC3-209ENST00000494464 CNKSR1Q969H4 720 aa17.14■□□□□ 0.33
ERCC3-209ENST00000494464 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
ERCC3-209ENST00000494464 NECTIN2Q92692 538 aa17.13■□□□□ 0.33
ERCC3-209ENST00000494464 CCDC88AQ3V6T2 1871 aa17.12■□□□□ 0.33
ERCC3-209ENST00000494464 NPR1P16066 1061 aa17.12■□□□□ 0.33
ERCC3-209ENST00000494464 C1QTNF8P60827 252 aa17.12■□□□□ 0.33
ERCC3-209ENST00000494464 RASSF7Q02833 373 aa17.12■□□□□ 0.33
ERCC3-209ENST00000494464 PARP10Q53GL7 1025 aa17.12■□□□□ 0.33
ERCC3-209ENST00000494464 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
ERCC3-209ENST00000494464 RNF181Q9P0P0 153 aa17.12■□□□□ 0.33
ERCC3-209ENST00000494464 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
ERCC3-209ENST00000494464 DICER1Q9UPY3 1922 aaKnown RBP17.12■□□□□ 0.33
ERCC3-209ENST00000494464 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
ERCC3-209ENST00000494464 NFKBIEO00221 500 aa17.11■□□□□ 0.33
ERCC3-209ENST00000494464 NTSR2O95665 410 aa17.11■□□□□ 0.33
ERCC3-209ENST00000494464 GPTP24298 496 aa17.11■□□□□ 0.33
ERCC3-209ENST00000494464 HSP90AB3PQ58FF7 597 aa17.11■□□□□ 0.33
ERCC3-209ENST00000494464 PRPF40BQ6NWY9 871 aaKnown RBP17.11■□□□□ 0.33
ERCC3-209ENST00000494464 COPS6Q7L5N1 327 aa17.11■□□□□ 0.33
ERCC3-209ENST00000494464 ZNF526Q8TF50 670 aaPredicted RBP17.11■□□□□ 0.33
ERCC3-209ENST00000494464 XAGE3Q8WTP9 111 aa17.11■□□□□ 0.33
ERCC3-209ENST00000494464 DBF4Q9UBU7 674 aaPredicted RBP17.11■□□□□ 0.33
ERCC3-209ENST00000494464 LMNB1P20700 586 aa17.1■□□□□ 0.33
ERCC3-209ENST00000494464 GTF2E1P29083 439 aaPredicted RBP17.1■□□□□ 0.33
ERCC3-209ENST00000494464 CRY2Q49AN0 593 aa17.1■□□□□ 0.33
ERCC3-209ENST00000494464 SOGA3Q5TF21 947 aa17.1■□□□□ 0.33
ERCC3-209ENST00000494464 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
ERCC3-209ENST00000494464 LTBP3Q9NS15 1303 aa17.1■□□□□ 0.33
ERCC3-209ENST00000494464 C21orf2O43822 256 aa17.09■□□□□ 0.33
ERCC3-209ENST00000494464 ERFEQ4G0M1 354 aa17.09■□□□□ 0.33
ERCC3-209ENST00000494464 SUSD4Q5VX71 490 aa17.09■□□□□ 0.33
ERCC3-209ENST00000494464 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
ERCC3-209ENST00000494464 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
ERCC3-209ENST00000494464 PRELPP51888 382 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms