RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 RIPK4P57078 832 aa11.56□□□□□ -0.56
ITGB1-217ENST00000494395 EVX2Q03828 476 aa11.56□□□□□ -0.56
ITGB1-217ENST00000494395 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
ITGB1-217ENST00000494395 TTC5Q8N0Z6 440 aa11.56□□□□□ -0.56
ITGB1-217ENST00000494395 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
ITGB1-217ENST00000494395 BMP2KQ9NSY1 1161 aaPredicted RBP11.56□□□□□ -0.56
ITGB1-217ENST00000494395 TRIM35Q9UPQ4 493 aa11.56□□□□□ -0.56
ITGB1-217ENST00000494395 PHF14O94880 888 aa11.55□□□□□ -0.56
ITGB1-217ENST00000494395 FMNL2Q96PY5 1086 aa11.55□□□□□ -0.56
ITGB1-217ENST00000494395 CCDC87Q9NVE4 849 aa11.55□□□□□ -0.56
ITGB1-217ENST00000494395 RRP7AQ9Y3A4 280 aaKnown RBP11.55□□□□□ -0.56
ITGB1-217ENST00000494395 RTCBQ9Y3I0 505 aaKnown RBP11.55□□□□□ -0.56
ITGB1-217ENST00000494395 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
ITGB1-217ENST00000494395 LMOD3Q0VAK6 560 aa11.54□□□□□ -0.56
ITGB1-217ENST00000494395 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
ITGB1-217ENST00000494395 MRS2Q9HD23 443 aa11.54□□□□□ -0.56
ITGB1-217ENST00000494395 ZBTB1Q9Y2K1 713 aa11.54□□□□□ -0.56
ITGB1-217ENST00000494395 SCN7AQ01118 1682 aa11.53□□□□□ -0.56
ITGB1-217ENST00000494395 PRAMEF22A3QJZ6 481 aa11.53□□□□□ -0.56
ITGB1-217ENST00000494395 MIS18AQ9NYP9 233 aa11.53□□□□□ -0.56
ITGB1-217ENST00000494395 BCORQ6W2J9 1755 aa11.53□□□□□ -0.56
ITGB1-217ENST00000494395 KIF13BQ9NQT8 1826 aa11.52□□□□□ -0.57
ITGB1-217ENST00000494395 APAF1O14727 1248 aa11.52□□□□□ -0.57
ITGB1-217ENST00000494395 EIF4A1P60842 406 aaKnown RBP11.52□□□□□ -0.57
ITGB1-217ENST00000494395 TRAPPC3LQ5T215 181 aa11.52□□□□□ -0.57
ITGB1-217ENST00000494395 MSL1Q68DK7 614 aa11.52□□□□□ -0.57
ITGB1-217ENST00000494395 TEX13AQ9BXU3 409 aaPredicted RBP11.52□□□□□ -0.57
ITGB1-217ENST00000494395 BABAM1Q9NWV8 329 aa11.52□□□□□ -0.57
ITGB1-217ENST00000494395 USP16Q9Y5T5 823 aa11.52□□□□□ -0.57
ITGB1-217ENST00000494395 COL15A1P39059 1388 aa11.52□□□□□ -0.57
ITGB1-217ENST00000494395 GYS1P13807 737 aa11.51□□□□□ -0.57
ITGB1-217ENST00000494395 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
ITGB1-217ENST00000494395 NEUROD2Q15784 382 aa11.51□□□□□ -0.57
ITGB1-217ENST00000494395 ARXQ96QS3 562 aa11.51□□□□□ -0.57
ITGB1-217ENST00000494395 USP42Q9H9J4 1324 aaKnown RBP11.51□□□□□ -0.57
ITGB1-217ENST00000494395 KIAA1551Q9HCM1 1747 aa11.5□□□□□ -0.57
ITGB1-217ENST00000494395 NRXN2Q9P2S2 1712 aa11.5□□□□□ -0.57
ITGB1-217ENST00000494395 CHL1O00533 1208 aa11.5□□□□□ -0.57
ITGB1-217ENST00000494395 GIGYF1O75420 1035 aaPredicted RBP11.5□□□□□ -0.57
ITGB1-217ENST00000494395 STARD3NLO95772 234 aa11.5□□□□□ -0.57
ITGB1-217ENST00000494395 SNRPA1P09661 255 aaKnown RBP11.5□□□□□ -0.57
ITGB1-217ENST00000494395 CLCN6P51797 869 aa11.5□□□□□ -0.57
ITGB1-217ENST00000494395 PPP1R1BQ9UD71 204 aaPredicted RBP11.5□□□□□ -0.57
ITGB1-217ENST00000494395 A1BGP04217 495 aa11.49□□□□□ -0.57
ITGB1-217ENST00000494395 ZNF853P0CG23 659 aa11.49□□□□□ -0.57
ITGB1-217ENST00000494395 POLD1P28340 1107 aa11.49□□□□□ -0.57
ITGB1-217ENST00000494395 FHDC1Q9C0D6 1143 aaPredicted RBP11.49□□□□□ -0.57
ITGB1-217ENST00000494395 SRP68Q9UHB9 627 aaKnown RBP11.49□□□□□ -0.57
ITGB1-217ENST00000494395 TSPYL4Q9UJ04 414 aa11.49□□□□□ -0.57
ITGB1-217ENST00000494395 AFDNP55196 1824 aaKnown RBP11.49□□□□□ -0.57
ITGB1-217ENST00000494395 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
ITGB1-217ENST00000494395 CANXP27824 592 aaKnown RBP11.48□□□□□ -0.57
ITGB1-217ENST00000494395 RFC4P35249 363 aa11.48□□□□□ -0.57
ITGB1-217ENST00000494395 IL6STP40189 918 aaPredicted RBP11.48□□□□□ -0.57
ITGB1-217ENST00000494395 CCDC27Q2M243 656 aa11.48□□□□□ -0.57
ITGB1-217ENST00000494395 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
ITGB1-217ENST00000494395 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
ITGB1-217ENST00000494395 SYT17Q9BSW7 474 aa11.48□□□□□ -0.57
ITGB1-217ENST00000494395 BCL2L12Q9HB09 334 aa11.48□□□□□ -0.57
ITGB1-217ENST00000494395 NARFQ9UHQ1 456 aa11.48□□□□□ -0.57
ITGB1-217ENST00000494395 PDE4AP27815 886 aa11.47□□□□□ -0.57
ITGB1-217ENST00000494395 NLGN1Q8N2Q7 840 aa11.47□□□□□ -0.57
ITGB1-217ENST00000494395 LARP6Q9BRS8 491 aaKnown RBP11.47□□□□□ -0.57
ITGB1-217ENST00000494395 C10orf71Q711Q0 1435 aa11.46□□□□□ -0.57
ITGB1-217ENST00000494395 MMP10P09238 476 aa11.46□□□□□ -0.57
ITGB1-217ENST00000494395 PIP4K2AP48426 406 aaPredicted RBP11.46□□□□□ -0.57
ITGB1-217ENST00000494395 E2F4Q16254 413 aa11.46□□□□□ -0.57
ITGB1-217ENST00000494395 USPL1Q5W0Q7 1092 aa11.46□□□□□ -0.57
ITGB1-217ENST00000494395 CCER2I3L3R5 266 aa11.45□□□□□ -0.58
ITGB1-217ENST00000494395 CAMTA2O94983 1202 aa11.45□□□□□ -0.58
ITGB1-217ENST00000494395 TM4SF1P30408 202 aa11.45□□□□□ -0.58
ITGB1-217ENST00000494395 KRT24Q2M2I5 525 aa11.45□□□□□ -0.58
ITGB1-217ENST00000494395 LRP10Q7Z4F1 713 aa11.45□□□□□ -0.58
ITGB1-217ENST00000494395 WWC1Q8IX03 1113 aa11.45□□□□□ -0.58
ITGB1-217ENST00000494395 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
ITGB1-217ENST00000494395 MBIPQ9NS73 344 aa11.45□□□□□ -0.58
ITGB1-217ENST00000494395 IFT57Q9NWB7 429 aa11.45□□□□□ -0.58
ITGB1-217ENST00000494395 BRCA1P38398 1863 aaKnown RBP11.44□□□□□ -0.58
ITGB1-217ENST00000494395 NUP98P52948 1817 aa11.44□□□□□ -0.58
ITGB1-217ENST00000494395 ERBB4Q15303 1308 aa11.44□□□□□ -0.58
ITGB1-217ENST00000494395 A0A087WZG4 1122 aa11.44□□□□□ -0.58
ITGB1-217ENST00000494395 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
ITGB1-217ENST00000494395 ZPR1O75312 459 aa11.44□□□□□ -0.58
ITGB1-217ENST00000494395 ATN1P54259 1190 aaPredicted RBP11.44□□□□□ -0.58
ITGB1-217ENST00000494395 DDR1Q08345 913 aa11.44□□□□□ -0.58
ITGB1-217ENST00000494395 PDIA6Q15084 440 aa11.44□□□□□ -0.58
ITGB1-217ENST00000494395 FAM9BQ8IZU0 186 aa11.44□□□□□ -0.58
ITGB1-217ENST00000494395 NLGN2Q8NFZ4 835 aa11.44□□□□□ -0.58
ITGB1-217ENST00000494395 SENP3-EIF4A1A0A087X0R7 540 aa11.43□□□□□ -0.58
ITGB1-217ENST00000494395 GNAI1P63096 354 aa11.43□□□□□ -0.58
ITGB1-217ENST00000494395 CALD1Q05682 793 aaKnown RBP11.43□□□□□ -0.58
ITGB1-217ENST00000494395 NFIXQ14938 502 aa11.43□□□□□ -0.58
ITGB1-217ENST00000494395 TBC1D2BQ9UPU7 963 aa11.43□□□□□ -0.58
ITGB1-217ENST00000494395 LAS1LQ9Y4W2 734 aaKnown RBP11.43□□□□□ -0.58
ITGB1-217ENST00000494395 CD2APQ9Y5K6 639 aa11.43□□□□□ -0.58
ITGB1-217ENST00000494395 N4BP2Q86UW6 1770 aaPredicted RBP11.43□□□□□ -0.58
ITGB1-217ENST00000494395 ANKRD31Q8N7Z5 1873 aa11.42□□□□□ -0.58
ITGB1-217ENST00000494395 IL16Q14005 1332 aa11.42□□□□□ -0.58
ITGB1-217ENST00000494395 HOXB7P09629 217 aa11.42□□□□□ -0.58
ITGB1-217ENST00000494395 MFSD10Q14728 455 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms