RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 WWC1Q8IX03 1113 aa7.03□□□□□ -1.28
SRPRB-205ENST00000494297 ARHGEF1Q92888 912 aaKnown RBP7.03□□□□□ -1.28
SRPRB-205ENST00000494297 MTFR1LQ9H019 292 aa7.03□□□□□ -1.28
SRPRB-205ENST00000494297 SPON1Q9HCB6 807 aa7.03□□□□□ -1.28
SRPRB-205ENST00000494297 CCDC87Q9NVE4 849 aa7.03□□□□□ -1.28
SRPRB-205ENST00000494297 TSPYL4Q9UJ04 414 aa7.03□□□□□ -1.28
SRPRB-205ENST00000494297 USP16Q9Y5T5 823 aa7.03□□□□□ -1.28
SRPRB-205ENST00000494297 C4BP0C0L5 1744 aa7.02□□□□□ -1.29
SRPRB-205ENST00000494297 GNPATO15228 680 aa7.02□□□□□ -1.29
SRPRB-205ENST00000494297 GNAI1P63096 354 aa7.02□□□□□ -1.29
SRPRB-205ENST00000494297 GSE1Q14687 1217 aa7.02□□□□□ -1.29
SRPRB-205ENST00000494297 WDR63Q8IWG1 891 aa7.02□□□□□ -1.29
SRPRB-205ENST00000494297 SLAIN1Q8ND83 568 aa7.02□□□□□ -1.29
SRPRB-205ENST00000494297 IFT57Q9NWB7 429 aa7.02□□□□□ -1.29
SRPRB-205ENST00000494297 CIZ1Q9ULV3 898 aaPredicted RBP7.02□□□□□ -1.29
SRPRB-205ENST00000494297 C5P01031 1676 aa7.02□□□□□ -1.29
SRPRB-205ENST00000494297 IL16Q14005 1332 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 DLG5Q8TDM6 1919 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 KAT6BQ8WYB5 2073 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 UBR2Q8IWV8 1755 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 PRAMEF22A3QJZ6 481 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 A1BGP04217 495 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 IL6STP40189 918 aaPredicted RBP7.01□□□□□ -1.29
SRPRB-205ENST00000494297 PTGER2P43116 358 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 EIF5P55010 431 aaKnown RBP7.01□□□□□ -1.29
SRPRB-205ENST00000494297 SMIM5Q71RC9 77 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 ZBTB1Q9Y2K1 713 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 TAF1LQ8IZX4 1826 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 QSER1Q2KHR3 1735 aa7.01□□□□□ -1.29
SRPRB-205ENST00000494297 SOS1Q07889 1333 aaPredicted RBP7.01□□□□□ -1.29
SRPRB-205ENST00000494297 CASZ1Q86V15 1759 aa7□□□□□ -1.29
SRPRB-205ENST00000494297 VIRMAQ69YN4 1812 aaKnown RBP7□□□□□ -1.29
SRPRB-205ENST00000494297 A0A087WZG4 1122 aa7□□□□□ -1.29
SRPRB-205ENST00000494297 PHF14O94880 888 aa7□□□□□ -1.29
SRPRB-205ENST00000494297 ZBTB7AO95365 584 aa7□□□□□ -1.29
SRPRB-205ENST00000494297 HOXB7P09629 217 aa7□□□□□ -1.29
SRPRB-205ENST00000494297 RFC4P35249 363 aa7□□□□□ -1.29
SRPRB-205ENST00000494297 NLGN1Q8N2Q7 840 aa7□□□□□ -1.29
SRPRB-205ENST00000494297 MBIPQ9NS73 344 aa7□□□□□ -1.29
SRPRB-205ENST00000494297 LAS1LQ9Y4W2 734 aaKnown RBP7□□□□□ -1.29
SRPRB-205ENST00000494297 COL5A3P25940 1745 aaPredicted RBP7□□□□□ -1.29
SRPRB-205ENST00000494297 TJP1Q07157 1748 aa7□□□□□ -1.29
SRPRB-205ENST00000494297 ZNF521Q96K83 1311 aa7□□□□□ -1.29
SRPRB-205ENST00000494297 NBPF26B4DH59 902 aa6.99□□□□□ -1.29
SRPRB-205ENST00000494297 RGL2O15211 777 aa6.99□□□□□ -1.29
SRPRB-205ENST00000494297 GYS1P13807 737 aa6.99□□□□□ -1.29
SRPRB-205ENST00000494297 CANXP27824 592 aaKnown RBP6.99□□□□□ -1.29
SRPRB-205ENST00000494297 NBPF10Q6P3W6 841 aaKnown RBP6.99□□□□□ -1.29
SRPRB-205ENST00000494297 NBPF15Q8N660 670 aa6.99□□□□□ -1.29
SRPRB-205ENST00000494297 NARFQ9UHQ1 456 aa6.99□□□□□ -1.29
SRPRB-205ENST00000494297 SALL2Q9Y467 1007 aaPredicted RBP6.99□□□□□ -1.29
SRPRB-205ENST00000494297 ERBB4Q15303 1308 aa6.99□□□□□ -1.29
SRPRB-205ENST00000494297 USP42Q9H9J4 1324 aaKnown RBP6.99□□□□□ -1.29
SRPRB-205ENST00000494297 KDM3BQ7LBC6 1761 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 SENP3-EIF4A1A0A087X0R7 540 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 ZPR1O75312 459 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 POLD1P28340 1107 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 TM4SF1P30408 202 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 PDIA6Q15084 440 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 KRT24Q2M2I5 525 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 DUSP27Q5VZP5 1158 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 LRP10Q7Z4F1 713 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 CHMP4AQ9BY43 222 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 OCEL1Q9H607 264 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 UBR3Q6ZT12 1888 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 LRP5O75197 1615 aa6.98□□□□□ -1.29
SRPRB-205ENST00000494297 COL15A1P39059 1388 aa6.97□□□□□ -1.29
SRPRB-205ENST00000494297 EIF2S2P20042 333 aaKnown RBP6.97□□□□□ -1.29
SRPRB-205ENST00000494297 MKRN3Q13064 507 aaKnown RBP6.97□□□□□ -1.29
SRPRB-205ENST00000494297 USPL1Q5W0Q7 1092 aa6.97□□□□□ -1.29
SRPRB-205ENST00000494297 CLEC4GQ6UXB4 293 aa6.97□□□□□ -1.29
SRPRB-205ENST00000494297 ZNF467Q7Z7K2 595 aaPredicted RBP6.97□□□□□ -1.29
SRPRB-205ENST00000494297 NPM2Q86SE8 214 aaKnown RBP6.97□□□□□ -1.29
SRPRB-205ENST00000494297 DZIP3Q86Y13 1208 aaKnown RBP6.97□□□□□ -1.29
SRPRB-205ENST00000494297 C8orf58Q8NAV2 365 aa6.97□□□□□ -1.29
SRPRB-205ENST00000494297 ARXQ96QS3 562 aa6.97□□□□□ -1.29
SRPRB-205ENST00000494297 BCL2L12Q9HB09 334 aa6.97□□□□□ -1.29
SRPRB-205ENST00000494297 SRP68Q9UHB9 627 aaKnown RBP6.97□□□□□ -1.29
SRPRB-205ENST00000494297 TBC1D2BQ9UPU7 963 aa6.97□□□□□ -1.29
SRPRB-205ENST00000494297 MYH14Q7Z406 1995 aaKnown RBP6.97□□□□□ -1.29
SRPRB-205ENST00000494297 COL24A1Q17RW2 1714 aa6.96□□□□□ -1.29
SRPRB-205ENST00000494297 ERVV-1B6SEH8 477 aa6.96□□□□□ -1.3
SRPRB-205ENST00000494297 CAMTA2O94983 1202 aa6.96□□□□□ -1.3
SRPRB-205ENST00000494297 PIP4K2AP48426 406 aaPredicted RBP6.96□□□□□ -1.3
SRPRB-205ENST00000494297 IRX5P78411 483 aaPredicted RBP6.96□□□□□ -1.3
SRPRB-205ENST00000494297 MSL1Q68DK7 614 aa6.96□□□□□ -1.3
SRPRB-205ENST00000494297 TRMT2AQ8IZ69 625 aaKnown RBP6.96□□□□□ -1.3
SRPRB-205ENST00000494297 SPOCK2Q92563 424 aa6.96□□□□□ -1.3
SRPRB-205ENST00000494297 TSR2Q969E8 191 aaKnown RBP6.96□□□□□ -1.3
SRPRB-205ENST00000494297 MYH16Q9H6N6 1097 aa6.96□□□□□ -1.3
SRPRB-205ENST00000494297 DDX21Q9NR30 783 aaKnown RBP eCLIP6.96□□□□□ -1.3
SRPRB-205ENST00000494297 DBF4Q9UBU7 674 aaPredicted RBP6.96□□□□□ -1.3
SRPRB-205ENST00000494297 TUBGCP6Q96RT7 1819 aa6.96□□□□□ -1.3
SRPRB-205ENST00000494297 E9PSI1 815 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 ELL2O00472 640 aaPredicted RBP6.95□□□□□ -1.3
SRPRB-205ENST00000494297 VAMP4O75379 141 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 MMP10P09238 476 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 MYL6BP14649 208 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 PSEN1P49768 467 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 SLFN5Q08AF3 891 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms