RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 COX20Q5RI15 118 aa10.85□□□□□ -0.67
MSL3-217ENST00000494268 LCE2AQ5TA79 106 aaPredicted RBP10.85□□□□□ -0.67
MSL3-217ENST00000494268 IRF7Q92985 503 aa10.85□□□□□ -0.67
MSL3-217ENST00000494268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.85□□□□□ -0.67
MSL3-217ENST00000494268 KLK14Q9P0G3 267 aa10.85□□□□□ -0.67
MSL3-217ENST00000494268 VSIG8P0DPA2 414 aa10.84□□□□□ -0.67
MSL3-217ENST00000494268 NLRP8Q86W28 1048 aa10.84□□□□□ -0.67
MSL3-217ENST00000494268 COL26A1Q96A83 441 aa10.84□□□□□ -0.67
MSL3-217ENST00000494268 SUSD3Q96L08 255 aa10.84□□□□□ -0.67
MSL3-217ENST00000494268 NEUROD4Q9HD90 331 aa10.84□□□□□ -0.67
MSL3-217ENST00000494268 GJA3Q9Y6H8 435 aa10.84□□□□□ -0.67
MSL3-217ENST00000494268 PDE4CQ08493 712 aa10.83□□□□□ -0.68
MSL3-217ENST00000494268 DGKZQ13574 1117 aa10.83□□□□□ -0.68
MSL3-217ENST00000494268 LBRQ14739 615 aaKnown RBP10.83□□□□□ -0.68
MSL3-217ENST00000494268 BCS1LQ9Y276 419 aa10.83□□□□□ -0.68
MSL3-217ENST00000494268 PTCD1O75127 700 aaKnown RBP10.82□□□□□ -0.68
MSL3-217ENST00000494268 MYO19Q96H55 970 aa10.82□□□□□ -0.68
MSL3-217ENST00000494268 BNIP3LO60238 219 aa10.81□□□□□ -0.68
MSL3-217ENST00000494268 HCN2Q9UL51 889 aa10.81□□□□□ -0.68
MSL3-217ENST00000494268 GPC6Q9Y625 555 aaPredicted RBP10.81□□□□□ -0.68
MSL3-217ENST00000494268 ATXN7O15265 892 aaPredicted RBP10.8□□□□□ -0.68
MSL3-217ENST00000494268 GMPRP36959 345 aa10.8□□□□□ -0.68
MSL3-217ENST00000494268 C11orf91Q3C1V1 193 aa10.8□□□□□ -0.68
MSL3-217ENST00000494268 RNFT1Q5M7Z0 435 aa10.8□□□□□ -0.68
MSL3-217ENST00000494268 C16orf46Q6P387 395 aa10.8□□□□□ -0.68
MSL3-217ENST00000494268 FOXR1Q6PIV2 292 aa10.8□□□□□ -0.68
MSL3-217ENST00000494268 ABHD17AQ96GS6 310 aa10.8□□□□□ -0.68
MSL3-217ENST00000494268 COL25A1Q9BXS0 654 aaPredicted RBP10.8□□□□□ -0.68
MSL3-217ENST00000494268 NDFIP2Q9NV92 336 aa10.8□□□□□ -0.68
MSL3-217ENST00000494268 PCDHGC4Q9Y5F7 938 aa10.8□□□□□ -0.68
MSL3-217ENST00000494268 KRT76Q01546 638 aa10.79□□□□□ -0.68
MSL3-217ENST00000494268 GAS6Q14393 721 aa10.79□□□□□ -0.68
MSL3-217ENST00000494268 FAM26DQ5JW98 314 aa10.79□□□□□ -0.68
MSL3-217ENST00000494268 FIGNL1Q6PIW4 674 aa10.79□□□□□ -0.68
MSL3-217ENST00000494268 ANKIB1Q9P2G1 1089 aa10.79□□□□□ -0.68
MSL3-217ENST00000494268 DCDC2BA2VCK2 349 aa10.78□□□□□ -0.68
MSL3-217ENST00000494268 GTF3C2Q8WUA4 911 aaPredicted RBP10.78□□□□□ -0.68
MSL3-217ENST00000494268 TRERF1Q96PN7 1200 aa10.78□□□□□ -0.68
MSL3-217ENST00000494268 TNFRSF10BO14763 440 aa10.77□□□□□ -0.69
MSL3-217ENST00000494268 KHNYNO15037 678 aaKnown RBP10.77□□□□□ -0.69
MSL3-217ENST00000494268 TNP2Q05952 138 aa10.77□□□□□ -0.69
MSL3-217ENST00000494268 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
MSL3-217ENST00000494268 IFT43Q96FT9 208 aa10.77□□□□□ -0.69
MSL3-217ENST00000494268 TRAIPQ9BWF2 469 aa10.77□□□□□ -0.69
MSL3-217ENST00000494268 CFHR5Q9BXR6 569 aa10.77□□□□□ -0.69
MSL3-217ENST00000494268 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
MSL3-217ENST00000494268 MAPTP10636 758 aaKnown RBP10.76□□□□□ -0.69
MSL3-217ENST00000494268 CEP63Q96MT8 703 aa10.76□□□□□ -0.69
MSL3-217ENST00000494268 STRN4Q9NRL3 753 aa10.76□□□□□ -0.69
MSL3-217ENST00000494268 MTMR3Q13615 1198 aa10.75□□□□□ -0.69
MSL3-217ENST00000494268 B4GALNT3Q6L9W6 998 aa10.75□□□□□ -0.69
MSL3-217ENST00000494268 BTLAQ7Z6A9 289 aa10.75□□□□□ -0.69
MSL3-217ENST00000494268 CNTNAP3BQ96NU0 1288 aa10.75□□□□□ -0.69
MSL3-217ENST00000494268 CNTNAP3Q9BZ76 1288 aa10.75□□□□□ -0.69
MSL3-217ENST00000494268 ATXN7L1Q9ULK2 861 aaPredicted RBP10.75□□□□□ -0.69
MSL3-217ENST00000494268 DNMT3AQ9Y6K1 912 aaPredicted RBP10.75□□□□□ -0.69
MSL3-217ENST00000494268 TGFBR3LH3BV60 316 aa10.74□□□□□ -0.69
MSL3-217ENST00000494268 ARID4AP29374 1257 aaPredicted RBP10.74□□□□□ -0.69
MSL3-217ENST00000494268 CTBSQ01459 385 aa10.74□□□□□ -0.69
MSL3-217ENST00000494268 SFSWAPQ12872 951 aaKnown RBP10.74□□□□□ -0.69
MSL3-217ENST00000494268 GRIN2CQ14957 1233 aa10.74□□□□□ -0.69
MSL3-217ENST00000494268 HIF1AQ16665 826 aa10.74□□□□□ -0.69
MSL3-217ENST00000494268 ETFBKMTQ8IXQ9 262 aa10.74□□□□□ -0.69
MSL3-217ENST00000494268 ANO2Q9NQ90 1003 aa10.74□□□□□ -0.69
MSL3-217ENST00000494268 ZBTB39O15060 712 aa10.73□□□□□ -0.69
MSL3-217ENST00000494268 EFSO43281 561 aa10.73□□□□□ -0.69
MSL3-217ENST00000494268 MICAL2O94851 1124 aa10.73□□□□□ -0.69
MSL3-217ENST00000494268 BRD1O95696 1058 aa10.73□□□□□ -0.69
MSL3-217ENST00000494268 FAM157BP0CG42 384 aa10.73□□□□□ -0.69
MSL3-217ENST00000494268 PDIA4P13667 645 aaKnown RBP10.73□□□□□ -0.69
MSL3-217ENST00000494268 BRD2P25440 801 aaKnown RBP10.73□□□□□ -0.69
MSL3-217ENST00000494268 TYRO3Q06418 890 aa10.73□□□□□ -0.69
MSL3-217ENST00000494268 PHF24Q9UPV7 400 aa10.73□□□□□ -0.69
MSL3-217ENST00000494268 ABL1P00519 1130 aa10.72□□□□□ -0.69
MSL3-217ENST00000494268 CD33P20138 364 aa10.72□□□□□ -0.69
MSL3-217ENST00000494268 FGFR3P22607 806 aa10.72□□□□□ -0.69
MSL3-217ENST00000494268 SERPINB4P48594 390 aa10.72□□□□□ -0.69
MSL3-217ENST00000494268 TXNDC2Q86VQ3 553 aa10.72□□□□□ -0.69
MSL3-217ENST00000494268 TREML1Q86YW5 311 aa10.72□□□□□ -0.69
MSL3-217ENST00000494268 BRD7Q9NPI1 651 aa10.72□□□□□ -0.69
MSL3-217ENST00000494268 STIM2Q9P246 746 aa10.72□□□□□ -0.69
MSL3-217ENST00000494268 C2CD2LO14523 706 aa10.71□□□□□ -0.69
MSL3-217ENST00000494268 OPLAHO14841 1288 aa10.71□□□□□ -0.69
MSL3-217ENST00000494268 MX2P20592 715 aa10.71□□□□□ -0.69
MSL3-217ENST00000494268 IDH3AP50213 366 aa10.71□□□□□ -0.69
MSL3-217ENST00000494268 IER5Q5VY09 327 aa10.71□□□□□ -0.69
MSL3-217ENST00000494268 HELQQ8TDG4 1101 aa10.71□□□□□ -0.69
MSL3-217ENST00000494268 INPP5BP32019 993 aa10.7□□□□□ -0.7
MSL3-217ENST00000494268 ZNF211Q13398 564 aaPredicted RBP10.7□□□□□ -0.7
MSL3-217ENST00000494268 MBIPQ9NS73 344 aa10.7□□□□□ -0.7
MSL3-217ENST00000494268 MTMR7Q9Y216 660 aa10.7□□□□□ -0.7
MSL3-217ENST00000494268 USP20Q9Y2K6 914 aa10.7□□□□□ -0.7
MSL3-217ENST00000494268 GRNP28799 593 aaKnown RBP10.69□□□□□ -0.7
MSL3-217ENST00000494268 MARK1Q9P0L2 795 aa10.69□□□□□ -0.7
MSL3-217ENST00000494268 IGF1RP08069 1367 aa10.67□□□□□ -0.7
MSL3-217ENST00000494268 LAMC2Q13753 1193 aa10.67□□□□□ -0.7
MSL3-217ENST00000494268 ATCAYQ86WG3 371 aa10.67□□□□□ -0.7
MSL3-217ENST00000494268 KCNH4Q9UQ05 1017 aa10.67□□□□□ -0.7
MSL3-217ENST00000494268 BMP4P12644 408 aa10.66□□□□□ -0.7
MSL3-217ENST00000494268 MPSTP25325 297 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms