RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PPP1R42Q7Z4L9 355 aa22.21■■□□□ 1.15
COL27A1-207ENST00000494090 CKAP2LQ8IYA6 745 aa22.21■■□□□ 1.15
COL27A1-207ENST00000494090 MAP3K2Q9Y2U5 619 aa22.21■■□□□ 1.15
COL27A1-207ENST00000494090 PCDHB15Q9Y5E8 787 aa22.21■■□□□ 1.15
COL27A1-207ENST00000494090 A0A087WZG4 1122 aa22.21■■□□□ 1.15
COL27A1-207ENST00000494090 PIBF1Q8WXW3 757 aa22.21■■□□□ 1.15
COL27A1-207ENST00000494090 RPGRQ92834 1020 aaKnown RBP22.21■■□□□ 1.15
COL27A1-207ENST00000494090 FAM83GA6ND36 823 aa22.2■■□□□ 1.14
COL27A1-207ENST00000494090 LDHCP07864 332 aa22.2■■□□□ 1.14
COL27A1-207ENST00000494090 HMG20BQ9P0W2 317 aa22.2■■□□□ 1.14
COL27A1-207ENST00000494090 EXOC5O00471 708 aa22.2■■□□□ 1.14
COL27A1-207ENST00000494090 VPS36Q86VN1 386 aa22.2■■□□□ 1.14
COL27A1-207ENST00000494090 SLC12A7Q9Y666 1083 aa22.2■■□□□ 1.14
COL27A1-207ENST00000494090 UBE2HP62256 183 aa22.2■■□□□ 1.14
COL27A1-207ENST00000494090 GUCY1B3Q02153 619 aa22.2■■□□□ 1.14
COL27A1-207ENST00000494090 ANKRD62A6NC57 917 aa22.19■■□□□ 1.14
COL27A1-207ENST00000494090 FSIP1Q8NA03 581 aa22.19■■□□□ 1.14
COL27A1-207ENST00000494090 GDPD2Q9HCC8 539 aa22.19■■□□□ 1.14
COL27A1-207ENST00000494090 DMRT2Q9Y5R5 561 aa22.19■■□□□ 1.14
COL27A1-207ENST00000494090 GBP2P32456 591 aaPredicted RBP22.18■■□□□ 1.14
COL27A1-207ENST00000494090 CCDC102AQ96A19 550 aa22.18■■□□□ 1.14
COL27A1-207ENST00000494090 SPA17Q15506 151 aa22.18■■□□□ 1.14
COL27A1-207ENST00000494090 CDC5LQ99459 802 aaKnown RBP22.18■■□□□ 1.14
COL27A1-207ENST00000494090 GOLGA8BA8MQT2 603 aa22.18■■□□□ 1.14
COL27A1-207ENST00000494090 SSRP1Q08945 709 aaKnown RBP22.18■■□□□ 1.14
COL27A1-207ENST00000494090 ENOX2Q16206 610 aaKnown RBP22.18■■□□□ 1.14
COL27A1-207ENST00000494090 PRAG1Q86YV5 1406 aa22.18■■□□□ 1.14
COL27A1-207ENST00000494090 GSDMDP57764 484 aa22.18■■□□□ 1.14
COL27A1-207ENST00000494090 CCDC12Q8WUD4 166 aaPredicted RBP22.18■■□□□ 1.14
COL27A1-207ENST00000494090 STX1AQ16623 288 aa22.17■■□□□ 1.14
COL27A1-207ENST00000494090 IFNL2Q8IZJ0 200 aa22.17■■□□□ 1.14
COL27A1-207ENST00000494090 CAVIN2O95810 425 aa22.17■■□□□ 1.14
COL27A1-207ENST00000494090 KIF5CO60282 957 aa22.17■■□□□ 1.14
COL27A1-207ENST00000494090 SDSP20132 328 aa22.17■■□□□ 1.14
COL27A1-207ENST00000494090 LARP6Q9BRS8 491 aaKnown RBP22.17■■□□□ 1.14
COL27A1-207ENST00000494090 ADCY5O95622 1261 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 KDM5BQ9UGL1 1544 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 DENND4BO75064 1496 aaPredicted RBP22.16■■□□□ 1.14
COL27A1-207ENST00000494090 CASQ1P31415 396 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 TMX3Q96JJ7 454 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 POLR3AO14802 1390 aaPredicted RBP22.16■■□□□ 1.14
COL27A1-207ENST00000494090 GOLGA8AA7E2F4 631 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 CCT2P78371 535 aaKnown RBP22.16■■□□□ 1.14
COL27A1-207ENST00000494090 PI4KAP2A4QPH2 592 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 TNNT1P13805 278 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 PI4KAP1Q8N8J0 262 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 CNNM3Q8NE01 707 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 CCDC194A0A1B0GVG4 234 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 FAM193AP78312 1265 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 CCDC96Q2M329 555 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 CATIPQ7Z7H3 387 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 NEK1Q96PY6 1258 aa22.16■■□□□ 1.14
COL27A1-207ENST00000494090 TFIP11Q9UBB9 837 aaKnown RBP22.16■■□□□ 1.14
COL27A1-207ENST00000494090 FOXO3O43524 673 aa22.15■■□□□ 1.14
COL27A1-207ENST00000494090 RANBP6O60518 1105 aaKnown RBP22.15■■□□□ 1.14
COL27A1-207ENST00000494090 ZSCAN23Q3MJ62 389 aa22.15■■□□□ 1.14
COL27A1-207ENST00000494090 SNX21Q969T3 373 aa22.15■■□□□ 1.14
COL27A1-207ENST00000494090 PYM1Q9BRP8 204 aaKnown RBP22.15■■□□□ 1.14
COL27A1-207ENST00000494090 KLHL10Q6JEL2 608 aa22.15■■□□□ 1.14
COL27A1-207ENST00000494090 ANKRD44Q8N8A2 993 aa22.15■■□□□ 1.14
COL27A1-207ENST00000494090 RHPN1Q8TCX5 695 aa22.15■■□□□ 1.14
COL27A1-207ENST00000494090 DUOX2Q9NRD8 1548 aa22.15■■□□□ 1.14
COL27A1-207ENST00000494090 CALRP27797 417 aaKnown RBP22.15■■□□□ 1.14
COL27A1-207ENST00000494090 ACEP12821 1306 aa22.14■■□□□ 1.14
COL27A1-207ENST00000494090 IFIT3O14879 490 aaKnown RBP22.14■■□□□ 1.14
COL27A1-207ENST00000494090 C8orf34Q49A92 452 aa22.14■■□□□ 1.14
COL27A1-207ENST00000494090 URI1O94763 535 aaPredicted RBP22.14■■□□□ 1.13
COL27A1-207ENST00000494090 CGNQ9P2M7 1197 aaKnown RBP22.14■■□□□ 1.13
COL27A1-207ENST00000494090 ANAPC15P60006 121 aa22.14■■□□□ 1.13
COL27A1-207ENST00000494090 MRPL50Q8N5N7 158 aaKnown RBP22.14■■□□□ 1.13
COL27A1-207ENST00000494090 CENPHQ9H3R5 247 aa22.14■■□□□ 1.13
COL27A1-207ENST00000494090 RAPGEF6Q8TEU7 1601 aa22.14■■□□□ 1.13
COL27A1-207ENST00000494090 KIF5BP33176 963 aa22.14■■□□□ 1.13
COL27A1-207ENST00000494090 SPTY2D1Q68D10 685 aaPredicted RBP22.14■■□□□ 1.13
COL27A1-207ENST00000494090 RBM27Q9P2N5 1060 aaKnown RBP22.14■■□□□ 1.13
COL27A1-207ENST00000494090 LRSAM1Q6UWE0 723 aa22.13■■□□□ 1.13
COL27A1-207ENST00000494090 GOLIM4O00461 696 aa22.13■■□□□ 1.13
COL27A1-207ENST00000494090 TSHZ3Q63HK5 1081 aa22.13■■□□□ 1.13
COL27A1-207ENST00000494090 ZSCAN22P10073 491 aaPredicted RBP22.13■■□□□ 1.13
COL27A1-207ENST00000494090 ITSN2Q9NZM3 1697 aa22.13■■□□□ 1.13
COL27A1-207ENST00000494090 CWC25Q9NXE8 425 aaPredicted RBP22.13■■□□□ 1.13
COL27A1-207ENST00000494090 PDE1AP54750 535 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 TAX1BP1Q86VP1 789 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 MEIS3Q99687 375 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 ZSCAN16Q9H4T2 348 aaPredicted RBP22.12■■□□□ 1.13
COL27A1-207ENST00000494090 BAG3O95817 575 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 KRT28Q7Z3Y7 464 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 SSR1P43307 286 aaKnown RBP22.12■■□□□ 1.13
COL27A1-207ENST00000494090 CACNA2D4Q7Z3S7 1137 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 PKNOX2Q96KN3 472 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 SCLT1Q96NL6 688 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 CRACR2AQ9BSW2 395 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 USP16Q9Y5T5 823 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 ZNF165P49910 485 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 KIF4BQ2VIQ3 1234 aa22.12■■□□□ 1.13
COL27A1-207ENST00000494090 NGLY1Q96IV0 654 aa22.11■■□□□ 1.13
COL27A1-207ENST00000494090 MCM3P25205 808 aa22.11■■□□□ 1.13
COL27A1-207ENST00000494090 NLRP5P59047 1200 aa22.11■■□□□ 1.13
COL27A1-207ENST00000494090 CADPS2Q86UW7 1296 aa22.11■■□□□ 1.13
COL27A1-207ENST00000494090 CCDC150Q8NCX0 1101 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms