RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 NBPF5PQ86XG9 351 aaPredicted RBP31.22■■■□□ 2.59
RHBDD3-206ENST00000493894 EIF4A1P60842 406 aaKnown RBP31.21■■■□□ 2.59
RHBDD3-206ENST00000493894 ZC3H4Q9UPT8 1303 aaKnown RBP31.21■■■□□ 2.59
RHBDD3-206ENST00000493894 LMNB1P20700 586 aa31.2■■■□□ 2.59
RHBDD3-206ENST00000493894 TOMM70O94826 608 aa31.19■■■□□ 2.58
RHBDD3-206ENST00000493894 NIP7Q9Y221 180 aaKnown RBP eCLIP31.19■■■□□ 2.58
RHBDD3-206ENST00000493894 TNRC6CQ9HCJ0 1690 aaKnown RBP31.19■■■□□ 2.58
RHBDD3-206ENST00000493894 TIAM2Q8IVF5 1701 aa31.18■■■□□ 2.58
RHBDD3-206ENST00000493894 RIPK4P57078 832 aa31.17■■■□□ 2.58
RHBDD3-206ENST00000493894 LMOD3Q0VAK6 560 aa31.17■■■□□ 2.58
RHBDD3-206ENST00000493894 CNKSR1Q969H4 720 aa31.17■■■□□ 2.58
RHBDD3-206ENST00000493894 ARFGEF2Q9Y6D5 1785 aa31.16■■■□□ 2.58
RHBDD3-206ENST00000493894 NFKBIEO00221 500 aa31.16■■■□□ 2.58
RHBDD3-206ENST00000493894 STYK1Q6J9G0 422 aa31.16■■■□□ 2.58
RHBDD3-206ENST00000493894 TSPYL4Q9UJ04 414 aa31.16■■■□□ 2.58
RHBDD3-206ENST00000493894 C21orf2O43822 256 aa31.15■■■□□ 2.58
RHBDD3-206ENST00000493894 SRGNP10124 158 aa31.15■■■□□ 2.58
RHBDD3-206ENST00000493894 C16orf71Q8IYS4 520 aaPredicted RBP31.15■■■□□ 2.58
RHBDD3-206ENST00000493894 ZNF219Q9P2Y4 722 aaPredicted RBP31.15■■■□□ 2.58
RHBDD3-206ENST00000493894 CEP350Q5VT06 3117 aa31.15■■■□□ 2.58
RHBDD3-206ENST00000493894 TPTE2Q6XPS3 522 aa31.14■■■□□ 2.58
RHBDD3-206ENST00000493894 NGEFQ8N5V2 710 aa31.14■■■□□ 2.58
RHBDD3-206ENST00000493894 MASTLQ96GX5 879 aa31.14■■■□□ 2.58
RHBDD3-206ENST00000493894 CACNA1SQ13698 1873 aa31.14■■■□□ 2.58
RHBDD3-206ENST00000493894 TMPOP42166 694 aaKnown RBP31.13■■■□□ 2.57
RHBDD3-206ENST00000493894 PRELPP51888 382 aa31.13■■■□□ 2.57
RHBDD3-206ENST00000493894 HLFQ16534 295 aa31.13■■■□□ 2.57
RHBDD3-206ENST00000493894 RRP7AQ9Y3A4 280 aaKnown RBP31.13■■■□□ 2.57
RHBDD3-206ENST00000493894 KIF6Q6ZMV9 814 aa31.12■■■□□ 2.57
RHBDD3-206ENST00000493894 FER1L6Q2WGJ9 1857 aa31.12■■■□□ 2.57
RHBDD3-206ENST00000493894 MYL6BP14649 208 aa31.11■■■□□ 2.57
RHBDD3-206ENST00000493894 WDR43Q15061 677 aaKnown RBP eCLIP31.11■■■□□ 2.57
RHBDD3-206ENST00000493894 ERBB4Q15303 1308 aa31.11■■■□□ 2.57
RHBDD3-206ENST00000493894 PRPF40BQ6NWY9 871 aaKnown RBP31.11■■■□□ 2.57
RHBDD3-206ENST00000493894 MAP3K15Q6ZN16 1313 aa31.11■■■□□ 2.57
RHBDD3-206ENST00000493894 CCDC88AQ3V6T2 1871 aa31.1■■■□□ 2.57
RHBDD3-206ENST00000493894 SLX4Q8IY92 1834 aa31.1■■■□□ 2.57
RHBDD3-206ENST00000493894 FAM177BA6PVY3 158 aa31.1■■■□□ 2.57
RHBDD3-206ENST00000493894 ERVV-1B6SEH8 477 aa31.1■■■□□ 2.57
RHBDD3-206ENST00000493894 SOGA3Q5TF21 947 aa31.1■■■□□ 2.57
RHBDD3-206ENST00000493894 RBM46Q8TBY0 533 aaKnown RBP31.1■■■□□ 2.57
RHBDD3-206ENST00000493894 BABAM1Q9NWV8 329 aa31.1■■■□□ 2.57
RHBDD3-206ENST00000493894 CCDC146Q8IYE0 955 aa31.09■■■□□ 2.57
RHBDD3-206ENST00000493894 LTBP3Q9NS15 1303 aa31.08■■■□□ 2.57
RHBDD3-206ENST00000493894 TAOK3Q9H2K8 898 aa31.08■■■□□ 2.57
RHBDD3-206ENST00000493894 RRAGCQ9HB90 399 aa31.08■■■□□ 2.57
RHBDD3-206ENST00000493894 NUP98P52948 1817 aa31.08■■■□□ 2.57
RHBDD3-206ENST00000493894 NPR1P16066 1061 aa31.07■■■□□ 2.56
RHBDD3-206ENST00000493894 GTF2E1P29083 439 aaPredicted RBP31.07■■■□□ 2.56
RHBDD3-206ENST00000493894 TTLL7Q6ZT98 887 aa31.07■■■□□ 2.56
RHBDD3-206ENST00000493894 KLRG2A4D1S0 409 aaPredicted RBP31.06■■■□□ 2.56
RHBDD3-206ENST00000493894 GLTPD2A6NH11 291 aa31.06■■■□□ 2.56
RHBDD3-206ENST00000493894 NYXQ9GZU5 481 aa31.06■■■□□ 2.56
RHBDD3-206ENST00000493894 RUNDC1Q96C34 613 aa31.05■■■□□ 2.56
RHBDD3-206ENST00000493894 ZBTB3Q9H5J0 574 aa31.05■■■□□ 2.56
RHBDD3-206ENST00000493894 APLP1P51693 650 aa31.04■■■□□ 2.56
RHBDD3-206ENST00000493894 NEUROD2Q15784 382 aa31.04■■■□□ 2.56
RHBDD3-206ENST00000493894 DICER1Q9UPY3 1922 aaKnown RBP31.04■■■□□ 2.56
RHBDD3-206ENST00000493894 IBTKQ9P2D0 1353 aaPredicted RBP31.03■■■□□ 2.56
RHBDD3-206ENST00000493894 ERFEQ4G0M1 354 aa31.02■■■□□ 2.56
RHBDD3-206ENST00000493894 PRKRIP1Q9H875 184 aaPredicted RBP31.02■■■□□ 2.56
RHBDD3-206ENST00000493894 ABCC12Q96J65 1359 aa31.02■■■□□ 2.56
RHBDD3-206ENST00000493894 EIF2S2P20042 333 aaKnown RBP31.01■■■□□ 2.55
RHBDD3-206ENST00000493894 FSTL1Q12841 308 aa31.01■■■□□ 2.55
RHBDD3-206ENST00000493894 CCDC93Q567U6 631 aa31.01■■■□□ 2.55
RHBDD3-206ENST00000493894 GPTP24298 496 aa31■■■□□ 2.55
RHBDD3-206ENST00000493894 UBN2Q6ZU65 1347 aa30.99■■■□□ 2.55
RHBDD3-206ENST00000493894 RIC1Q4ADV7 1423 aa30.99■■■□□ 2.55
RHBDD3-206ENST00000493894 DPY19L2Q6NUT2 758 aa30.99■■■□□ 2.55
RHBDD3-206ENST00000493894 GIGYF2Q6Y7W6 1299 aaKnown RBP30.99■■■□□ 2.55
RHBDD3-206ENST00000493894 NUTM1Q86Y26 1132 aa30.99■■■□□ 2.55
RHBDD3-206ENST00000493894 ADAMTS8Q9UP79 889 aa30.99■■■□□ 2.55
RHBDD3-206ENST00000493894 VEGFAP15692 232 aaPredicted RBP30.98■■■□□ 2.55
RHBDD3-206ENST00000493894 C7orf43Q8WVR3 580 aa30.98■■■□□ 2.55
RHBDD3-206ENST00000493894 PDIA6Q15084 440 aa30.97■■■□□ 2.55
RHBDD3-206ENST00000493894 WDR90Q96KV7 1748 aa30.96■■■□□ 2.55
RHBDD3-206ENST00000493894 ALDH1B1P30837 517 aa30.96■■■□□ 2.55
RHBDD3-206ENST00000493894 CRY2Q49AN0 593 aa30.96■■■□□ 2.55
RHBDD3-206ENST00000493894 LRP10Q7Z4F1 713 aa30.96■■■□□ 2.55
RHBDD3-206ENST00000493894 SMC1BQ8NDV3 1235 aa30.96■■■□□ 2.55
RHBDD3-206ENST00000493894 TRIM35Q9UPQ4 493 aa30.96■■■□□ 2.55
RHBDD3-206ENST00000493894 ZNF34Q8IZ26 560 aa30.95■■■□□ 2.55
RHBDD3-206ENST00000493894 CHL1O00533 1208 aa30.94■■■□□ 2.54
RHBDD3-206ENST00000493894 PROSER3Q2NL68 480 aa30.94■■■□□ 2.54
RHBDD3-206ENST00000493894 LAS1LQ9Y4W2 734 aaKnown RBP30.94■■■□□ 2.54
RHBDD3-206ENST00000493894 ANXA1P04083 346 aa30.93■■■□□ 2.54
RHBDD3-206ENST00000493894 PARP10Q53GL7 1025 aa30.93■■■□□ 2.54
RHBDD3-206ENST00000493894 SUSD4Q5VX71 490 aa30.93■■■□□ 2.54
RHBDD3-206ENST00000493894 FKBP4Q02790 459 aaKnown RBP eCLIP30.92■■■□□ 2.54
RHBDD3-206ENST00000493894 PPP1R42Q7Z4L9 355 aa30.92■■■□□ 2.54
RHBDD3-206ENST00000493894 NECTIN2Q92692 538 aa30.92■■■□□ 2.54
RHBDD3-206ENST00000493894 RPGRQ92834 1020 aaKnown RBP30.92■■■□□ 2.54
RHBDD3-206ENST00000493894 NTSR2O95665 410 aa30.91■■■□□ 2.54
RHBDD3-206ENST00000493894 RTKN2Q8IZC4 609 aa30.91■■■□□ 2.54
RHBDD3-206ENST00000493894 KRT24Q2M2I5 525 aa30.9■■■□□ 2.54
RHBDD3-206ENST00000493894 ANKRD36CQ5JPF3 1778 aa30.89■■■□□ 2.54
RHBDD3-206ENST00000493894 OLFM4Q6UX06 510 aa30.89■■■□□ 2.54
RHBDD3-206ENST00000493894 HSP90AB3PQ58FF7 597 aa30.87■■■□□ 2.53
RHBDD3-206ENST00000493894 COPS6Q7L5N1 327 aa30.87■■■□□ 2.53
RHBDD3-206ENST00000493894 XAGE3Q8WTP9 111 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms