RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 SETBP1Q9Y6X0 1596 aa11.47□□□□□ -0.57
LRCH3-218ENST00000493726 ADAMTS13Q76LX8 1427 aa11.47□□□□□ -0.57
LRCH3-218ENST00000493726 MAN1A2O60476 641 aa11.47□□□□□ -0.57
LRCH3-218ENST00000493726 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
LRCH3-218ENST00000493726 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
LRCH3-218ENST00000493726 TMPRSS4Q9NRS4 437 aa11.47□□□□□ -0.57
LRCH3-218ENST00000493726 PGPEP1Q9NXJ5 209 aa11.47□□□□□ -0.57
LRCH3-218ENST00000493726 CLTCL1P53675 1640 aa11.46□□□□□ -0.57
LRCH3-218ENST00000493726 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.57
LRCH3-218ENST00000493726 PIK3R4Q99570 1358 aa11.46□□□□□ -0.57
LRCH3-218ENST00000493726 PIP4K2BP78356 416 aa11.46□□□□□ -0.57
LRCH3-218ENST00000493726 KCNA6P17658 529 aa11.45□□□□□ -0.58
LRCH3-218ENST00000493726 ITGAEP38570 1179 aa11.45□□□□□ -0.58
LRCH3-218ENST00000493726 TSEN34Q9BSV6 310 aaKnown RBP11.45□□□□□ -0.58
LRCH3-218ENST00000493726 TBX22Q9Y458 520 aa11.45□□□□□ -0.58
LRCH3-218ENST00000493726 NCOA3Q9Y6Q9 1424 aa11.44□□□□□ -0.58
LRCH3-218ENST00000493726 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
LRCH3-218ENST00000493726 H3BM21 787 aa11.44□□□□□ -0.58
LRCH3-218ENST00000493726 WIPF1O43516 503 aa11.44□□□□□ -0.58
LRCH3-218ENST00000493726 Q6ZVU0 165 aa11.44□□□□□ -0.58
LRCH3-218ENST00000493726 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
LRCH3-218ENST00000493726 AGBL1Q96MI9 1066 aa11.44□□□□□ -0.58
LRCH3-218ENST00000493726 DNMT3LQ9UJW3 386 aa11.44□□□□□ -0.58
LRCH3-218ENST00000493726 NEXMIFQ5QGS0 1516 aa11.44□□□□□ -0.58
LRCH3-218ENST00000493726 ERBB4Q15303 1308 aa11.43□□□□□ -0.58
LRCH3-218ENST00000493726 DHX9Q08211 1270 aaKnown RBP11.43□□□□□ -0.58
LRCH3-218ENST00000493726 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
LRCH3-218ENST00000493726 PRAG1Q86YV5 1406 aa11.43□□□□□ -0.58
LRCH3-218ENST00000493726 ACIN1Q9UKV3 1341 aaKnown RBP11.42□□□□□ -0.58
LRCH3-218ENST00000493726 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
LRCH3-218ENST00000493726 GMPRP36959 345 aa11.42□□□□□ -0.58
LRCH3-218ENST00000493726 XRN1Q8IZH2 1706 aaKnown RBP11.41□□□□□ -0.58
LRCH3-218ENST00000493726 FIGNL2A6NMB9 653 aa11.41□□□□□ -0.58
LRCH3-218ENST00000493726 ERVH48-1M5A8F1 160 aa11.41□□□□□ -0.58
LRCH3-218ENST00000493726 TOM1O60784 492 aa11.41□□□□□ -0.58
LRCH3-218ENST00000493726 FBXO45P0C2W1 286 aa11.41□□□□□ -0.58
LRCH3-218ENST00000493726 RELBQ01201 579 aa11.41□□□□□ -0.58
LRCH3-218ENST00000493726 ZNF784Q8NCA9 323 aaPredicted RBP11.41□□□□□ -0.58
LRCH3-218ENST00000493726 SNRKQ9NRH2 765 aa11.41□□□□□ -0.58
LRCH3-218ENST00000493726 ZBBXA8MT70 800 aa11.4□□□□□ -0.58
LRCH3-218ENST00000493726 NPAS3Q8IXF0 933 aa11.4□□□□□ -0.58
LRCH3-218ENST00000493726 MTMR14Q8NCE2 650 aa11.4□□□□□ -0.58
LRCH3-218ENST00000493726 IRF7Q92985 503 aa11.4□□□□□ -0.58
LRCH3-218ENST00000493726 PCDHB9Q9Y5E1 797 aa11.4□□□□□ -0.58
LRCH3-218ENST00000493726 FAM135BQ49AJ0 1406 aa11.4□□□□□ -0.58
LRCH3-218ENST00000493726 SETD1AO15047 1707 aaKnown RBP11.4□□□□□ -0.58
LRCH3-218ENST00000493726 TMEM94Q12767 1356 aa11.4□□□□□ -0.59
LRCH3-218ENST00000493726 KIF1BO60333 1816 aa11.39□□□□□ -0.59
LRCH3-218ENST00000493726 TTLL8A6PVC2 850 aa11.39□□□□□ -0.59
LRCH3-218ENST00000493726 SLC26A8Q96RN1 970 aa11.39□□□□□ -0.59
LRCH3-218ENST00000493726 SPATA31E1Q6ZUB1 1445 aa11.38□□□□□ -0.59
LRCH3-218ENST00000493726 PTPRUQ92729 1446 aa11.38□□□□□ -0.59
LRCH3-218ENST00000493726 ZNF395Q9H8N7 513 aaPredicted RBP11.38□□□□□ -0.59
LRCH3-218ENST00000493726 ESPNB1AK53 854 aa11.37□□□□□ -0.59
LRCH3-218ENST00000493726 GIGYF1O75420 1035 aaPredicted RBP11.37□□□□□ -0.59
LRCH3-218ENST00000493726 ADD1P35611 737 aaKnown RBP11.37□□□□□ -0.59
LRCH3-218ENST00000493726 BANK1Q8NDB2 785 aa11.37□□□□□ -0.59
LRCH3-218ENST00000493726 PPLO60437 1756 aa11.36□□□□□ -0.59
LRCH3-218ENST00000493726 SETD5Q9C0A6 1442 aa11.36□□□□□ -0.59
LRCH3-218ENST00000493726 IFT172Q9UG01 1749 aa11.36□□□□□ -0.59
LRCH3-218ENST00000493726 SPINT1O43278 529 aa11.36□□□□□ -0.59
LRCH3-218ENST00000493726 GPR37L1O60883 481 aa11.36□□□□□ -0.59
LRCH3-218ENST00000493726 CTSOP43234 321 aaPredicted RBP11.36□□□□□ -0.59
LRCH3-218ENST00000493726 INSM1Q01101 510 aaPredicted RBP11.36□□□□□ -0.59
LRCH3-218ENST00000493726 INSM2Q96T92 566 aaPredicted RBP11.36□□□□□ -0.59
LRCH3-218ENST00000493726 RPGRIP1LQ68CZ1 1315 aa11.35□□□□□ -0.59
LRCH3-218ENST00000493726 LILRA1O75019 489 aa11.35□□□□□ -0.59
LRCH3-218ENST00000493726 PPFIA3O75145 1194 aa11.35□□□□□ -0.59
LRCH3-218ENST00000493726 CYLDQ9NQC7 956 aa11.35□□□□□ -0.59
LRCH3-218ENST00000493726 RGS17Q9UGC6 210 aaPredicted RBP11.35□□□□□ -0.59
LRCH3-218ENST00000493726 DCCP43146 1447 aa11.35□□□□□ -0.59
LRCH3-218ENST00000493726 METP08581 1390 aa11.33□□□□□ -0.6
LRCH3-218ENST00000493726 PPP1R15AO75807 674 aaPredicted RBP11.33□□□□□ -0.6
LRCH3-218ENST00000493726 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.33□□□□□ -0.6
LRCH3-218ENST00000493726 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
LRCH3-218ENST00000493726 ADH1AP07327 375 aa11.32□□□□□ -0.6
LRCH3-218ENST00000493726 PTSQ03393 145 aa11.32□□□□□ -0.6
LRCH3-218ENST00000493726 PROSER2Q86WR7 435 aaPredicted RBP11.32□□□□□ -0.6
LRCH3-218ENST00000493726 MPHOSPH9Q99550 1183 aa11.32□□□□□ -0.6
LRCH3-218ENST00000493726 NDUFB9Q9Y6M9 179 aa11.32□□□□□ -0.6
LRCH3-218ENST00000493726 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
LRCH3-218ENST00000493726 PTCH1Q13635 1447 aa11.32□□□□□ -0.6
LRCH3-218ENST00000493726 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.32□□□□□ -0.6
LRCH3-218ENST00000493726 NRXN1Q9ULB1 1477 aa11.32□□□□□ -0.6
LRCH3-218ENST00000493726 RAB3GAP2Q9H2M9 1393 aa11.31□□□□□ -0.6
LRCH3-218ENST00000493726 NR1H3Q13133 447 aa11.31□□□□□ -0.6
LRCH3-218ENST00000493726 KDF1Q8NAX2 398 aaPredicted RBP11.31□□□□□ -0.6
LRCH3-218ENST00000493726 MSH6P52701 1360 aa11.3□□□□□ -0.6
LRCH3-218ENST00000493726 CCDC144AA2RUR9 1427 aa11.3□□□□□ -0.6
LRCH3-218ENST00000493726 TRIM52Q96A61 297 aa11.3□□□□□ -0.6
LRCH3-218ENST00000493726 TECPR2O15040 1411 aa11.29□□□□□ -0.6
LRCH3-218ENST00000493726 AHDC1Q5TGY3 1603 aaPredicted RBP11.29□□□□□ -0.6
LRCH3-218ENST00000493726 SEPT12Q8IYM1 358 aa11.29□□□□□ -0.6
LRCH3-218ENST00000493726 C19orf44Q9H6X5 657 aa11.29□□□□□ -0.6
LRCH3-218ENST00000493726 AMOTL2Q9Y2J4 779 aa11.29□□□□□ -0.6
LRCH3-218ENST00000493726 ANKRD30BQ9BXX2 1392 aa11.28□□□□□ -0.6
LRCH3-218ENST00000493726 SRCAPQ6ZRS2 3230 aa11.28□□□□□ -0.6
LRCH3-218ENST00000493726 LAMC1P11047 1609 aa11.28□□□□□ -0.6
LRCH3-218ENST00000493726 PIK3C2GO75747 1445 aa11.28□□□□□ -0.6
LRCH3-218ENST00000493726 ADGRL3Q9HAR2 1447 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms