RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 HLFQ16534 295 aa28.95■■■□□ 2.22
HLA-E-203ENST00000493699 ZEB1P37275 1124 aaPredicted RBP28.94■■■□□ 2.22
HLA-E-203ENST00000493699 NEUROD2Q15784 382 aa28.93■■■□□ 2.22
HLA-E-203ENST00000493699 TRIM35Q9UPQ4 493 aa28.93■■■□□ 2.22
HLA-E-203ENST00000493699 NBPF5PQ86XG9 351 aaPredicted RBP28.92■■■□□ 2.22
HLA-E-203ENST00000493699 NIP7Q9Y221 180 aaKnown RBP eCLIP28.92■■■□□ 2.22
HLA-E-203ENST00000493699 ERVV-1B6SEH8 477 aa28.91■■■□□ 2.22
HLA-E-203ENST00000493699 KIF3CO14782 793 aa28.91■■■□□ 2.22
HLA-E-203ENST00000493699 ST5P78524 1137 aa28.91■■■□□ 2.22
HLA-E-203ENST00000493699 ZNF622Q969S3 477 aaKnown RBP eCLIP28.91■■■□□ 2.22
HLA-E-203ENST00000493699 SBF1O95248 1867 aa28.9■■■□□ 2.22
HLA-E-203ENST00000493699 NGEFQ8N5V2 710 aa28.9■■■□□ 2.22
HLA-E-203ENST00000493699 ERBB4Q15303 1308 aa28.9■■■□□ 2.22
HLA-E-203ENST00000493699 NPHP1O15259 732 aa28.89■■■□□ 2.22
HLA-E-203ENST00000493699 SRGNP10124 158 aa28.89■■■□□ 2.22
HLA-E-203ENST00000493699 TTLL7Q6ZT98 887 aa28.89■■■□□ 2.22
HLA-E-203ENST00000493699 RNF181Q9P0P0 153 aa28.89■■■□□ 2.22
HLA-E-203ENST00000493699 COL11A2P13942 1736 aaPredicted RBP28.89■■■□□ 2.21
HLA-E-203ENST00000493699 CHL1O00533 1208 aa28.88■■■□□ 2.21
HLA-E-203ENST00000493699 MYL6BP14649 208 aa28.88■■■□□ 2.21
HLA-E-203ENST00000493699 PRELPP51888 382 aa28.88■■■□□ 2.21
HLA-E-203ENST00000493699 RASSF7Q02833 373 aa28.88■■■□□ 2.21
HLA-E-203ENST00000493699 TPTE2Q6XPS3 522 aa28.88■■■□□ 2.21
HLA-E-203ENST00000493699 MAP3K15Q6ZN16 1313 aa28.88■■■□□ 2.21
HLA-E-203ENST00000493699 KLRG2A4D1S0 409 aaPredicted RBP28.87■■■□□ 2.21
HLA-E-203ENST00000493699 PDIA6Q15084 440 aa28.87■■■□□ 2.21
HLA-E-203ENST00000493699 LRP10Q7Z4F1 713 aa28.87■■■□□ 2.21
HLA-E-203ENST00000493699 SENP3-EIF4A1A0A087X0R7 540 aa28.86■■■□□ 2.21
HLA-E-203ENST00000493699 STYK1Q6J9G0 422 aa28.86■■■□□ 2.21
HLA-E-203ENST00000493699 NFKBIEO00221 500 aa28.85■■■□□ 2.21
HLA-E-203ENST00000493699 MASTLQ96GX5 879 aa28.85■■■□□ 2.21
HLA-E-203ENST00000493699 EIF2S2P20042 333 aaKnown RBP28.84■■■□□ 2.21
HLA-E-203ENST00000493699 LMNB1P20700 586 aa28.84■■■□□ 2.21
HLA-E-203ENST00000493699 KIF6Q6ZMV9 814 aa28.84■■■□□ 2.21
HLA-E-203ENST00000493699 CNKSR1Q969H4 720 aa28.84■■■□□ 2.21
HLA-E-203ENST00000493699 C21orf2O43822 256 aa28.83■■■□□ 2.21
HLA-E-203ENST00000493699 CEP350Q5VT06 3117 aa28.83■■■□□ 2.21
HLA-E-203ENST00000493699 FAM177BA6PVY3 158 aa28.82■■■□□ 2.2
HLA-E-203ENST00000493699 NMRK2Q9NPI5 230 aa28.82■■■□□ 2.2
HLA-E-203ENST00000493699 NUP98P52948 1817 aa28.82■■■□□ 2.2
HLA-E-203ENST00000493699 ZBTB3Q9H5J0 574 aa28.81■■■□□ 2.2
HLA-E-203ENST00000493699 ZC3H4Q9UPT8 1303 aaKnown RBP28.8■■■□□ 2.2
HLA-E-203ENST00000493699 KRT24Q2M2I5 525 aa28.8■■■□□ 2.2
HLA-E-203ENST00000493699 PROSER3Q2NL68 480 aa28.8■■■□□ 2.2
HLA-E-203ENST00000493699 PRPF40BQ6NWY9 871 aaKnown RBP28.8■■■□□ 2.2
HLA-E-203ENST00000493699 ZNF219Q9P2Y4 722 aaPredicted RBP28.8■■■□□ 2.2
HLA-E-203ENST00000493699 SLX4Q8IY92 1834 aa28.8■■■□□ 2.2
HLA-E-203ENST00000493699 NPR1P16066 1061 aa28.79■■■□□ 2.2
HLA-E-203ENST00000493699 GIGYF2Q6Y7W6 1299 aaKnown RBP28.79■■■□□ 2.2
HLA-E-203ENST00000493699 ZNF34Q8IZ26 560 aa28.79■■■□□ 2.2
HLA-E-203ENST00000493699 LAS1LQ9Y4W2 734 aaKnown RBP28.79■■■□□ 2.2
HLA-E-203ENST00000493699 UBN2Q6ZU65 1347 aa28.78■■■□□ 2.2
HLA-E-203ENST00000493699 APAF1O14727 1248 aa28.78■■■□□ 2.2
HLA-E-203ENST00000493699 ANXA1P04083 346 aa28.78■■■□□ 2.2
HLA-E-203ENST00000493699 C7orf43Q8WVR3 580 aa28.78■■■□□ 2.2
HLA-E-203ENST00000493699 NYXQ9GZU5 481 aa28.78■■■□□ 2.2
HLA-E-203ENST00000493699 CFAP44Q96MT7 982 aa28.77■■■□□ 2.2
HLA-E-203ENST00000493699 FER1L6Q2WGJ9 1857 aa28.76■■■□□ 2.2
HLA-E-203ENST00000493699 KDM2BQ8NHM5 1336 aa28.76■■■□□ 2.19
HLA-E-203ENST00000493699 GPTP24298 496 aa28.76■■■□□ 2.19
HLA-E-203ENST00000493699 GTF2E1P29083 439 aaPredicted RBP28.76■■■□□ 2.19
HLA-E-203ENST00000493699 CCDC184Q52MB2 194 aa28.76■■■□□ 2.19
HLA-E-203ENST00000493699 LTBP3Q9NS15 1303 aa28.75■■■□□ 2.19
HLA-E-203ENST00000493699 TOMM70O94826 608 aa28.75■■■□□ 2.19
HLA-E-203ENST00000493699 SUSD4Q5VX71 490 aa28.75■■■□□ 2.19
HLA-E-203ENST00000493699 NUTM1Q86Y26 1132 aa28.75■■■□□ 2.19
HLA-E-203ENST00000493699 NECTIN2Q92692 538 aa28.75■■■□□ 2.19
HLA-E-203ENST00000493699 ARFGEF2Q9Y6D5 1785 aa28.75■■■□□ 2.19
HLA-E-203ENST00000493699 IBTKQ9P2D0 1353 aaPredicted RBP28.75■■■□□ 2.19
HLA-E-203ENST00000493699 ZNF853P0CG23 659 aa28.74■■■□□ 2.19
HLA-E-203ENST00000493699 ERFEQ4G0M1 354 aa28.74■■■□□ 2.19
HLA-E-203ENST00000493699 DDX21Q9NR30 783 aaKnown RBP eCLIP28.74■■■□□ 2.19
HLA-E-203ENST00000493699 ABCC12Q96J65 1359 aa28.74■■■□□ 2.19
HLA-E-203ENST00000493699 ZNF316A6NFI3 1004 aaPredicted RBP28.73■■■□□ 2.19
HLA-E-203ENST00000493699 CCDC88AQ3V6T2 1871 aa28.73■■■□□ 2.19
HLA-E-203ENST00000493699 CRY2Q49AN0 593 aa28.73■■■□□ 2.19
HLA-E-203ENST00000493699 SOGA3Q5TF21 947 aa28.73■■■□□ 2.19
HLA-E-203ENST00000493699 COPS6Q7L5N1 327 aa28.73■■■□□ 2.19
HLA-E-203ENST00000493699 HOXB7P09629 217 aa28.72■■■□□ 2.19
HLA-E-203ENST00000493699 HSPA6P17066 643 aa28.72■■■□□ 2.19
HLA-E-203ENST00000493699 GLTPD2A6NH11 291 aa28.71■■■□□ 2.19
HLA-E-203ENST00000493699 NTSR2O95665 410 aa28.71■■■□□ 2.19
HLA-E-203ENST00000493699 TAOK3Q9H2K8 898 aa28.71■■■□□ 2.19
HLA-E-203ENST00000493699 RRAGCQ9HB90 399 aa28.71■■■□□ 2.19
HLA-E-203ENST00000493699 MBIPQ9NS73 344 aa28.71■■■□□ 2.19
HLA-E-203ENST00000493699 CACNA1SQ13698 1873 aa28.71■■■□□ 2.19
HLA-E-203ENST00000493699 RIC1Q4ADV7 1423 aa28.7■■■□□ 2.19
HLA-E-203ENST00000493699 ALDH1B1P30837 517 aa28.7■■■□□ 2.18
HLA-E-203ENST00000493699 PARP10Q53GL7 1025 aa28.7■■■□□ 2.18
HLA-E-203ENST00000493699 XAGE3Q8WTP9 111 aa28.7■■■□□ 2.18
HLA-E-203ENST00000493699 TNRC6CQ9HCJ0 1690 aaKnown RBP28.69■■■□□ 2.18
HLA-E-203ENST00000493699 AIMP1Q12904 312 aaKnown RBP28.68■■■□□ 2.18
HLA-E-203ENST00000493699 PPP1R42Q7Z4L9 355 aa28.68■■■□□ 2.18
HLA-E-203ENST00000493699 CHPF2Q9P2E5 772 aa28.68■■■□□ 2.18
HLA-E-203ENST00000493699 CCDC93Q567U6 631 aa28.67■■■□□ 2.18
HLA-E-203ENST00000493699 HDGFL1Q5TGJ6 251 aa28.67■■■□□ 2.18
HLA-E-203ENST00000493699 IFT57Q9NWB7 429 aa28.67■■■□□ 2.18
HLA-E-203ENST00000493699 HOXA10P31260 410 aaPredicted RBP28.66■■■□□ 2.18
HLA-E-203ENST00000493699 DUSP27Q5VZP5 1158 aa28.66■■■□□ 2.18
HLA-E-203ENST00000493699 RBM46Q8TBY0 533 aaKnown RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms