RNA–Protein interactions for RNA: ENST00000493698.1

TFIP11-215, Transcript of tuftelin interacting protein 11, humanhuman

TSL 3

Gene TFIP11, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFIP11-215ENST00000493698 FANCIQ9NVI1 1328 aa13.58□□□□□ -0.24
TFIP11-215ENST00000493698 EIF5P55010 431 aaKnown RBP13.57□□□□□ -0.24
TFIP11-215ENST00000493698 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
TFIP11-215ENST00000493698 USP16Q9Y5T5 823 aa13.57□□□□□ -0.24
TFIP11-215ENST00000493698 ZBED9Q6R2W3 1325 aa13.57□□□□□ -0.24
TFIP11-215ENST00000493698 USP42Q9H9J4 1324 aaKnown RBP13.57□□□□□ -0.24
TFIP11-215ENST00000493698 CT47B1P0C2W7 299 aaPredicted RBP13.56□□□□□ -0.24
TFIP11-215ENST00000493698 TWISTNBQ3B726 338 aaPredicted RBP13.56□□□□□ -0.24
TFIP11-215ENST00000493698 COL23A1Q86Y22 540 aaPredicted RBP13.56□□□□□ -0.24
TFIP11-215ENST00000493698 HYPKQ9NX55 129 aa13.56□□□□□ -0.24
TFIP11-215ENST00000493698 NARFQ9UHQ1 456 aa13.56□□□□□ -0.24
TFIP11-215ENST00000493698 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
TFIP11-215ENST00000493698 EIF2S2P20042 333 aaKnown RBP13.55□□□□□ -0.24
TFIP11-215ENST00000493698 ARHGEF1Q92888 912 aaKnown RBP13.55□□□□□ -0.24
TFIP11-215ENST00000493698 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
TFIP11-215ENST00000493698 PPP1R1BQ9UD71 204 aaPredicted RBP13.55□□□□□ -0.24
TFIP11-215ENST00000493698 DDX58O95786 925 aaKnown RBP13.54□□□□□ -0.24
TFIP11-215ENST00000493698 A1BGP04217 495 aa13.54□□□□□ -0.24
TFIP11-215ENST00000493698 HSP90AB3PQ58FF7 597 aa13.54□□□□□ -0.24
TFIP11-215ENST00000493698 CLEC4GQ6UXB4 293 aa13.54□□□□□ -0.24
TFIP11-215ENST00000493698 DZIP3Q86Y13 1208 aaKnown RBP13.54□□□□□ -0.24
TFIP11-215ENST00000493698 TSR2Q969E8 191 aaKnown RBP13.54□□□□□ -0.24
TFIP11-215ENST00000493698 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
TFIP11-215ENST00000493698 ERVV-1B6SEH8 477 aa13.53□□□□□ -0.24
TFIP11-215ENST00000493698 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
TFIP11-215ENST00000493698 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
TFIP11-215ENST00000493698 ARXQ96QS3 562 aa13.53□□□□□ -0.24
TFIP11-215ENST00000493698 HAX1O00165 279 aa13.52□□□□□ -0.25
TFIP11-215ENST00000493698 EVX2Q03828 476 aa13.52□□□□□ -0.25
TFIP11-215ENST00000493698 SLFN5Q08AF3 891 aa13.52□□□□□ -0.25
TFIP11-215ENST00000493698 PARP3Q9Y6F1 533 aa13.52□□□□□ -0.25
TFIP11-215ENST00000493698 ANKRD36CQ5JPF3 1778 aa13.51□□□□□ -0.25
TFIP11-215ENST00000493698 MAP3K15Q6ZN16 1313 aa13.51□□□□□ -0.25
TFIP11-215ENST00000493698 PRAMEF22A3QJZ6 481 aa13.51□□□□□ -0.25
TFIP11-215ENST00000493698 GYS1P13807 737 aa13.51□□□□□ -0.25
TFIP11-215ENST00000493698 MYL6BP14649 208 aa13.51□□□□□ -0.25
TFIP11-215ENST00000493698 CARMIL3Q8ND23 1372 aa13.5□□□□□ -0.25
TFIP11-215ENST00000493698 EXOSC9Q06265 439 aaKnown RBP13.5□□□□□ -0.25
TFIP11-215ENST00000493698 USPL1Q5W0Q7 1092 aa13.5□□□□□ -0.25
TFIP11-215ENST00000493698 CHPF2Q9P2E5 772 aa13.5□□□□□ -0.25
TFIP11-215ENST00000493698 ATP10DQ9P241 1426 aa13.49□□□□□ -0.25
TFIP11-215ENST00000493698 NUP98P52948 1817 aa13.49□□□□□ -0.25
TFIP11-215ENST00000493698 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
TFIP11-215ENST00000493698 NBPF26B4DH59 902 aa13.49□□□□□ -0.25
TFIP11-215ENST00000493698 ELL2O00472 640 aaPredicted RBP13.49□□□□□ -0.25
TFIP11-215ENST00000493698 NPHP1O15259 732 aa13.49□□□□□ -0.25
TFIP11-215ENST00000493698 NBPF10Q6P3W6 841 aaKnown RBP13.49□□□□□ -0.25
TFIP11-215ENST00000493698 NBPF15Q8N660 670 aa13.49□□□□□ -0.25
TFIP11-215ENST00000493698 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
TFIP11-215ENST00000493698 SETDB2Q96T68 719 aa13.49□□□□□ -0.25
TFIP11-215ENST00000493698 IBTKQ9P2D0 1353 aaPredicted RBP13.48□□□□□ -0.25
TFIP11-215ENST00000493698 RNF123Q5XPI4 1314 aa13.48□□□□□ -0.25
TFIP11-215ENST00000493698 CAMTA2O94983 1202 aa13.48□□□□□ -0.25
TFIP11-215ENST00000493698 MMP10P09238 476 aa13.48□□□□□ -0.25
TFIP11-215ENST00000493698 KRT24Q2M2I5 525 aa13.48□□□□□ -0.25
TFIP11-215ENST00000493698 NYXQ9GZU5 481 aa13.48□□□□□ -0.25
TFIP11-215ENST00000493698 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
TFIP11-215ENST00000493698 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
TFIP11-215ENST00000493698 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
TFIP11-215ENST00000493698 HSP90B1P14625 803 aaKnown RBP13.47□□□□□ -0.25
TFIP11-215ENST00000493698 ALDH1L2Q3SY69 923 aa13.47□□□□□ -0.25
TFIP11-215ENST00000493698 PARP10Q53GL7 1025 aa13.47□□□□□ -0.25
TFIP11-215ENST00000493698 MSL1Q68DK7 614 aa13.47□□□□□ -0.25
TFIP11-215ENST00000493698 PLBD2Q8NHP8 589 aa13.47□□□□□ -0.25
TFIP11-215ENST00000493698 NECTIN2Q92692 538 aa13.47□□□□□ -0.25
TFIP11-215ENST00000493698 SRP68Q9UHB9 627 aaKnown RBP13.47□□□□□ -0.25
TFIP11-215ENST00000493698 KIF13BQ9NQT8 1826 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 VAMP4O75379 141 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 PTGER2P43116 358 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 ST5P78524 1137 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 NEXNQ0ZGT2 675 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 GIGYF2Q6Y7W6 1299 aaKnown RBP13.46□□□□□ -0.25
TFIP11-215ENST00000493698 COPS6Q7L5N1 327 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 TRMT2AQ8IZ69 625 aaKnown RBP13.46□□□□□ -0.25
TFIP11-215ENST00000493698 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 SGIP1Q9BQI5 828 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 PDGFDQ9GZP0 370 aaPredicted RBP13.46□□□□□ -0.25
TFIP11-215ENST00000493698 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 NRXN2Q9P2S2 1712 aa13.46□□□□□ -0.25
TFIP11-215ENST00000493698 PDIA6Q15084 440 aa13.45□□□□□ -0.26
TFIP11-215ENST00000493698 ANKRD13DQ6ZTN6 518 aa13.45□□□□□ -0.26
TFIP11-215ENST00000493698 PPP1R42Q7Z4L9 355 aa13.45□□□□□ -0.26
TFIP11-215ENST00000493698 RIC3Q7Z5B4 369 aa13.45□□□□□ -0.26
TFIP11-215ENST00000493698 TSPYL6Q8N831 410 aa13.45□□□□□ -0.26
TFIP11-215ENST00000493698 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
TFIP11-215ENST00000493698 KIF16BQ96L93 1317 aa13.44□□□□□ -0.26
TFIP11-215ENST00000493698 PIP4K2AP48426 406 aaPredicted RBP13.44□□□□□ -0.26
TFIP11-215ENST00000493698 AIMP1Q12904 312 aaKnown RBP13.44□□□□□ -0.26
TFIP11-215ENST00000493698 TPTE2Q6XPS3 522 aa13.44□□□□□ -0.26
TFIP11-215ENST00000493698 CNBD1Q8NA66 436 aa13.44□□□□□ -0.26
TFIP11-215ENST00000493698 ZBTB3Q9H5J0 574 aa13.44□□□□□ -0.26
TFIP11-215ENST00000493698 NIP7Q9Y221 180 aaKnown RBP eCLIP13.44□□□□□ -0.26
TFIP11-215ENST00000493698 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
TFIP11-215ENST00000493698 PTPRCP08575 1304 aa13.43□□□□□ -0.26
TFIP11-215ENST00000493698 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
TFIP11-215ENST00000493698 GTF2E1P29083 439 aaPredicted RBP13.43□□□□□ -0.26
TFIP11-215ENST00000493698 TM4SF1P30408 202 aa13.43□□□□□ -0.26
TFIP11-215ENST00000493698 NUBP1P53384 320 aa13.43□□□□□ -0.26
TFIP11-215ENST00000493698 FLIIQ13045 1269 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms