RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 MCM5P33992 734 aa16.91■□□□□ 0.3
ZIC4-215ENST00000493664 PLCB2Q00722 1185 aa16.9■□□□□ 0.3
ZIC4-215ENST00000493664 NBPF6Q5VWK0 638 aa16.9■□□□□ 0.3
ZIC4-215ENST00000493664 PRPF40BQ6NWY9 871 aaKnown RBP16.9■□□□□ 0.3
ZIC4-215ENST00000493664 C17orf53Q8N3J3 647 aaPredicted RBP16.9■□□□□ 0.3
ZIC4-215ENST00000493664 NBPF4Q96M43 638 aa16.9■□□□□ 0.3
ZIC4-215ENST00000493664 DIAPH3Q9NSV4 1193 aa16.9■□□□□ 0.3
ZIC4-215ENST00000493664 TERF1P54274 439 aa16.9■□□□□ 0.3
ZIC4-215ENST00000493664 JAKMIP1Q96N16 626 aaKnown RBP16.9■□□□□ 0.3
ZIC4-215ENST00000493664 F13A1P00488 732 aa16.89■□□□□ 0.3
ZIC4-215ENST00000493664 COL9A3Q14050 684 aaPredicted RBP16.89■□□□□ 0.3
ZIC4-215ENST00000493664 CCDC183Q5T5S1 534 aa16.89■□□□□ 0.3
ZIC4-215ENST00000493664 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.3
ZIC4-215ENST00000493664 CSPP1Q1MSJ5 1256 aa16.89■□□□□ 0.29
ZIC4-215ENST00000493664 GIMAP6Q6P9H5 292 aa16.89■□□□□ 0.29
ZIC4-215ENST00000493664 TTC12Q9H892 705 aaPredicted RBP16.89■□□□□ 0.29
ZIC4-215ENST00000493664 HYPKQ9NX55 129 aa16.89■□□□□ 0.29
ZIC4-215ENST00000493664 KCNA6P17658 529 aa16.89■□□□□ 0.29
ZIC4-215ENST00000493664 GJB2P29033 226 aa16.89■□□□□ 0.29
ZIC4-215ENST00000493664 DNM1Q05193 864 aaKnown RBP16.89■□□□□ 0.29
ZIC4-215ENST00000493664 JARID2Q92833 1246 aaPredicted RBP16.89■□□□□ 0.29
ZIC4-215ENST00000493664 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.89■□□□□ 0.29
ZIC4-215ENST00000493664 ADCY5O95622 1261 aa16.88■□□□□ 0.29
ZIC4-215ENST00000493664 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
ZIC4-215ENST00000493664 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
ZIC4-215ENST00000493664 TBX22Q9Y458 520 aa16.88■□□□□ 0.29
ZIC4-215ENST00000493664 N4BP2Q86UW6 1770 aaPredicted RBP16.88■□□□□ 0.29
ZIC4-215ENST00000493664 DNTTIP2Q5QJE6 756 aaKnown RBP16.88■□□□□ 0.29
ZIC4-215ENST00000493664 TMEM87AQ8NBN3 555 aa16.88■□□□□ 0.29
ZIC4-215ENST00000493664 LRRC59Q96AG4 307 aaKnown RBP16.88■□□□□ 0.29
ZIC4-215ENST00000493664 BABAM1Q9NWV8 329 aa16.88■□□□□ 0.29
ZIC4-215ENST00000493664 ADCY9O60503 1353 aa16.87■□□□□ 0.29
ZIC4-215ENST00000493664 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
ZIC4-215ENST00000493664 UBE2HP62256 183 aa16.87■□□□□ 0.29
ZIC4-215ENST00000493664 PROSER3Q2NL68 480 aa16.87■□□□□ 0.29
ZIC4-215ENST00000493664 CWF19L2Q2TBE0 894 aaKnown RBP16.87■□□□□ 0.29
ZIC4-215ENST00000493664 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.87■□□□□ 0.29
ZIC4-215ENST00000493664 PRAMEF22A3QJZ6 481 aa16.87■□□□□ 0.29
ZIC4-215ENST00000493664 VPS37CA5D8V6 355 aaPredicted RBP16.87■□□□□ 0.29
ZIC4-215ENST00000493664 GLRX3O76003 335 aaKnown RBP16.87■□□□□ 0.29
ZIC4-215ENST00000493664 CLASRPQ8N2M8 674 aaKnown RBP16.87■□□□□ 0.29
ZIC4-215ENST00000493664 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
ZIC4-215ENST00000493664 PDRG1Q9NUG6 133 aa16.86■□□□□ 0.29
ZIC4-215ENST00000493664 C9orf78Q9NZ63 289 aaPredicted RBP16.86■□□□□ 0.29
ZIC4-215ENST00000493664 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
ZIC4-215ENST00000493664 TEFQ10587 303 aa16.86■□□□□ 0.29
ZIC4-215ENST00000493664 MAP3K2Q9Y2U5 619 aa16.86■□□□□ 0.29
ZIC4-215ENST00000493664 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
ZIC4-215ENST00000493664 MARF1Q9Y4F3 1742 aaKnown RBP16.86■□□□□ 0.29
ZIC4-215ENST00000493664 ST3GAL1Q11201 340 aa16.86■□□□□ 0.29
ZIC4-215ENST00000493664 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
ZIC4-215ENST00000493664 MTMR6Q9Y217 621 aa16.86■□□□□ 0.29
ZIC4-215ENST00000493664 SASS6Q6UVJ0 657 aa16.85■□□□□ 0.29
ZIC4-215ENST00000493664 FAM184AQ8NB25 1140 aa16.85■□□□□ 0.29
ZIC4-215ENST00000493664 ME3Q16798 604 aa16.85■□□□□ 0.29
ZIC4-215ENST00000493664 FAM173BQ6P4H8 233 aa16.85■□□□□ 0.29
ZIC4-215ENST00000493664 TSC1Q92574 1164 aa16.85■□□□□ 0.29
ZIC4-215ENST00000493664 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
ZIC4-215ENST00000493664 ECHDC1Q9NTX5 307 aa16.85■□□□□ 0.29
ZIC4-215ENST00000493664 IFIT2P09913 472 aaKnown RBP16.84■□□□□ 0.29
ZIC4-215ENST00000493664 FERMT3Q86UX7 667 aa16.84■□□□□ 0.29
ZIC4-215ENST00000493664 AACSQ86V21 672 aa16.84■□□□□ 0.29
ZIC4-215ENST00000493664 HSP90AB4PQ58FF6 505 aa16.84■□□□□ 0.29
ZIC4-215ENST00000493664 ZNF530Q6P9A1 599 aaPredicted RBP16.84■□□□□ 0.29
ZIC4-215ENST00000493664 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.29
ZIC4-215ENST00000493664 TTC41PQ6P2S7 1318 aa16.83■□□□□ 0.29
ZIC4-215ENST00000493664 KCNJ4P48050 445 aa16.83■□□□□ 0.28
ZIC4-215ENST00000493664 CCDC8Q9H0W5 538 aaPredicted RBP16.83■□□□□ 0.28
ZIC4-215ENST00000493664 AP5Z1O43299 807 aa16.83■□□□□ 0.28
ZIC4-215ENST00000493664 UVSSAQ2YD98 709 aa16.83■□□□□ 0.28
ZIC4-215ENST00000493664 RUFY2Q8WXA3 655 aa16.83■□□□□ 0.28
ZIC4-215ENST00000493664 VPS53Q5VIR6 699 aa16.82■□□□□ 0.28
ZIC4-215ENST00000493664 IP6K1Q92551 441 aa16.82■□□□□ 0.28
ZIC4-215ENST00000493664 ZSWIM6Q9HCJ5 1215 aa16.82■□□□□ 0.28
ZIC4-215ENST00000493664 USP42Q9H9J4 1324 aaKnown RBP16.82■□□□□ 0.28
ZIC4-215ENST00000493664 SIL1Q9H173 461 aa16.82■□□□□ 0.28
ZIC4-215ENST00000493664 TPCN1Q9ULQ1 816 aa16.82■□□□□ 0.28
ZIC4-215ENST00000493664 ATP6V1DQ9Y5K8 247 aa16.82■□□□□ 0.28
ZIC4-215ENST00000493664 RBM8AQ9Y5S9 174 aaKnown RBP16.82■□□□□ 0.28
ZIC4-215ENST00000493664 TAF6LQ9Y6J9 622 aa16.82■□□□□ 0.28
ZIC4-215ENST00000493664 FER1L4A9Z1Z3 1794 aa16.81■□□□□ 0.28
ZIC4-215ENST00000493664 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
ZIC4-215ENST00000493664 NOLC1Q14978 699 aaKnown RBP eCLIP16.81■□□□□ 0.28
ZIC4-215ENST00000493664 TAF7LQ5H9L4 462 aa16.81■□□□□ 0.28
ZIC4-215ENST00000493664 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
ZIC4-215ENST00000493664 LTN1O94822 1766 aa16.81■□□□□ 0.28
ZIC4-215ENST00000493664 KDM4AO75164 1064 aa16.81■□□□□ 0.28
ZIC4-215ENST00000493664 NECTIN1Q15223 517 aa16.81■□□□□ 0.28
ZIC4-215ENST00000493664 DBF4Q9UBU7 674 aaPredicted RBP16.81■□□□□ 0.28
ZIC4-215ENST00000493664 CCDC171Q6TFL3 1326 aa16.81■□□□□ 0.28
ZIC4-215ENST00000493664 DYNC1I1O14576 645 aa16.8■□□□□ 0.28
ZIC4-215ENST00000493664 NMIQ13287 307 aaPredicted RBP16.8■□□□□ 0.28
ZIC4-215ENST00000493664 KLHDC4Q8TBB5 520 aa16.8■□□□□ 0.28
ZIC4-215ENST00000493664 PIBF1Q8WXW3 757 aa16.8■□□□□ 0.28
ZIC4-215ENST00000493664 EAF2Q96CJ1 260 aaPredicted RBP16.8■□□□□ 0.28
ZIC4-215ENST00000493664 FUCA2Q9BTY2 467 aa16.8■□□□□ 0.28
ZIC4-215ENST00000493664 RGPD2P0DJD1 1756 aa16.8■□□□□ 0.28
ZIC4-215ENST00000493664 FAM177BA6PVY3 158 aa16.8■□□□□ 0.28
ZIC4-215ENST00000493664 CREB3L3Q68CJ9 461 aa16.8■□□□□ 0.28
ZIC4-215ENST00000493664 PHF8Q9UPP1 1060 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms