RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 SLC35F4A4IF30 521 aa8.36□□□□□ -1.07
CCNB3-208ENST00000493507 FOXO3O43524 673 aa8.36□□□□□ -1.07
CCNB3-208ENST00000493507 ATP2B4P23634 1241 aa8.36□□□□□ -1.07
CCNB3-208ENST00000493507 OCLNQ16625 522 aa8.36□□□□□ -1.07
CCNB3-208ENST00000493507 C1orf216Q8TAB5 229 aa8.36□□□□□ -1.07
CCNB3-208ENST00000493507 VTI1AQ96AJ9 217 aa8.36□□□□□ -1.07
CCNB3-208ENST00000493507 AIDAQ96BJ3 306 aa8.36□□□□□ -1.07
CCNB3-208ENST00000493507 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCNB3-208ENST00000493507 TATP17735 454 aaPredicted RBP8.35□□□□□ -1.07
CCNB3-208ENST00000493507 HIRAP54198 1017 aaPredicted RBP8.35□□□□□ -1.07
CCNB3-208ENST00000493507 POTEAQ6S8J7 498 aa8.35□□□□□ -1.07
CCNB3-208ENST00000493507 ZDHHC1Q8WTX9 485 aa8.35□□□□□ -1.07
CCNB3-208ENST00000493507 C2orf49Q9BVC5 232 aaPredicted RBP8.35□□□□□ -1.07
CCNB3-208ENST00000493507 ZDHHC3Q9NYG2 299 aa8.35□□□□□ -1.07
CCNB3-208ENST00000493507 CXXC1Q9P0U4 656 aaPredicted RBP8.35□□□□□ -1.07
CCNB3-208ENST00000493507 PARP3Q9Y6F1 533 aa8.35□□□□□ -1.07
CCNB3-208ENST00000493507 SENP3-EIF4A1A0A087X0R7 540 aa8.34□□□□□ -1.07
CCNB3-208ENST00000493507 EML1O00423 815 aa8.34□□□□□ -1.07
CCNB3-208ENST00000493507 F11P03951 625 aa8.34□□□□□ -1.07
CCNB3-208ENST00000493507 CCDC155Q8N6L0 562 aa8.34□□□□□ -1.07
CCNB3-208ENST00000493507 CTTNBP2Q8WZ74 1663 aa8.34□□□□□ -1.08
CCNB3-208ENST00000493507 SSFA2P28290 1259 aa8.33□□□□□ -1.08
CCNB3-208ENST00000493507 C1orf53Q5VUE5 145 aa8.33□□□□□ -1.08
CCNB3-208ENST00000493507 SLAIN2Q9P270 581 aa8.33□□□□□ -1.08
CCNB3-208ENST00000493507 IGF1RP08069 1367 aa8.33□□□□□ -1.08
CCNB3-208ENST00000493507 CARNS1A5YM72 827 aa8.32□□□□□ -1.08
CCNB3-208ENST00000493507 MSX1P28360 303 aa8.32□□□□□ -1.08
CCNB3-208ENST00000493507 NPAS3Q8IXF0 933 aa8.32□□□□□ -1.08
CCNB3-208ENST00000493507 PGBD3Q8N328 593 aa8.32□□□□□ -1.08
CCNB3-208ENST00000493507 COL26A1Q96A83 441 aa8.32□□□□□ -1.08
CCNB3-208ENST00000493507 GAS2L1Q99501 681 aaPredicted RBP8.32□□□□□ -1.08
CCNB3-208ENST00000493507 NXF1Q9UBU9 619 aaKnown RBP8.32□□□□□ -1.08
CCNB3-208ENST00000493507 HCN4Q9Y3Q4 1203 aa8.32□□□□□ -1.08
CCNB3-208ENST00000493507 GPC6Q9Y625 555 aaPredicted RBP8.32□□□□□ -1.08
CCNB3-208ENST00000493507 H7C1W4 665 aa8.31□□□□□ -1.08
CCNB3-208ENST00000493507 PTCD1O75127 700 aaKnown RBP8.31□□□□□ -1.08
CCNB3-208ENST00000493507 FKBP5Q13451 457 aaPredicted RBP8.31□□□□□ -1.08
CCNB3-208ENST00000493507 GMCL1Q96IK5 515 aa8.31□□□□□ -1.08
CCNB3-208ENST00000493507 KIF27Q86VH2 1401 aa8.3□□□□□ -1.08
CCNB3-208ENST00000493507 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
CCNB3-208ENST00000493507 ITGA6P23229 1130 aa8.3□□□□□ -1.08
CCNB3-208ENST00000493507 TXLNAP40222 546 aa8.3□□□□□ -1.08
CCNB3-208ENST00000493507 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
CCNB3-208ENST00000493507 ARSJQ5FYB0 599 aaPredicted RBP8.3□□□□□ -1.08
CCNB3-208ENST00000493507 SH3PXD2AQ5TCZ1 1133 aa8.3□□□□□ -1.08
CCNB3-208ENST00000493507 RIPOR1Q6ZS17 1223 aa8.3□□□□□ -1.08
CCNB3-208ENST00000493507 TRAIPQ9BWF2 469 aa8.3□□□□□ -1.08
CCNB3-208ENST00000493507 PHACTR1Q9C0D0 580 aa8.3□□□□□ -1.08
CCNB3-208ENST00000493507 GPAMQ9HCL2 828 aa8.3□□□□□ -1.08
CCNB3-208ENST00000493507 PDIA4P13667 645 aaKnown RBP8.29□□□□□ -1.08
CCNB3-208ENST00000493507 ATP4AP20648 1035 aa8.29□□□□□ -1.08
CCNB3-208ENST00000493507 EFHC2Q5JST6 749 aa8.29□□□□□ -1.08
CCNB3-208ENST00000493507 BICDL1Q6ZP65 573 aa8.29□□□□□ -1.08
CCNB3-208ENST00000493507 HOMEZQ8IX15 550 aa8.29□□□□□ -1.08
CCNB3-208ENST00000493507 ALDH16A1Q8IZ83 802 aa8.29□□□□□ -1.08
CCNB3-208ENST00000493507 CRISPLD1Q9H336 500 aa8.29□□□□□ -1.08
CCNB3-208ENST00000493507 MTMR7Q9Y216 660 aa8.29□□□□□ -1.08
CCNB3-208ENST00000493507 KIF13AQ9H1H9 1805 aa8.29□□□□□ -1.08
CCNB3-208ENST00000493507 ADCY10Q96PN6 1610 aa8.29□□□□□ -1.08
CCNB3-208ENST00000493507 BRD1O95696 1058 aa8.28□□□□□ -1.08
CCNB3-208ENST00000493507 HIF1AQ16665 826 aa8.28□□□□□ -1.08
CCNB3-208ENST00000493507 RTN1Q16799 776 aa8.28□□□□□ -1.08
CCNB3-208ENST00000493507 TRIM22Q8IYM9 498 aa8.28□□□□□ -1.08
CCNB3-208ENST00000493507 NGLY1Q96IV0 654 aa8.28□□□□□ -1.08
CCNB3-208ENST00000493507 NEUROD4Q9HD90 331 aa8.28□□□□□ -1.08
CCNB3-208ENST00000493507 IQGAP2Q13576 1575 aa8.27□□□□□ -1.09
CCNB3-208ENST00000493507 PHLDB3Q6NSJ2 640 aa8.27□□□□□ -1.09
CCNB3-208ENST00000493507 RHPN1Q8TCX5 695 aa8.27□□□□□ -1.09
CCNB3-208ENST00000493507 MKNK1Q9BUB5 465 aa8.27□□□□□ -1.09
CCNB3-208ENST00000493507 RUBCNLQ9H714 662 aa8.27□□□□□ -1.09
CCNB3-208ENST00000493507 A0A1W2PNR3 127 aa8.26□□□□□ -1.09
CCNB3-208ENST00000493507 TERTO14746 1132 aaKnown RBP8.26□□□□□ -1.09
CCNB3-208ENST00000493507 NLRP8Q86W28 1048 aa8.26□□□□□ -1.09
CCNB3-208ENST00000493507 SLC16A10Q8TF71 515 aa8.26□□□□□ -1.09
CCNB3-208ENST00000493507 C7orf43Q8WVR3 580 aa8.26□□□□□ -1.09
CCNB3-208ENST00000493507 NANOS1Q8WY41 292 aaKnown RBP8.26□□□□□ -1.09
CCNB3-208ENST00000493507 ZIC5Q96T25 663 aa8.26□□□□□ -1.09
CCNB3-208ENST00000493507 NUCKS1Q9H1E3 243 aaKnown RBP8.26□□□□□ -1.09
CCNB3-208ENST00000493507 ANKIB1Q9P2G1 1089 aa8.26□□□□□ -1.09
CCNB3-208ENST00000493507 GJA3Q9Y6H8 435 aa8.26□□□□□ -1.09
CCNB3-208ENST00000493507 DISP1Q96F81 1524 aa8.25□□□□□ -1.09
CCNB3-208ENST00000493507 H3BM21 787 aa8.25□□□□□ -1.09
CCNB3-208ENST00000493507 ARID4AP29374 1257 aaPredicted RBP8.25□□□□□ -1.09
CCNB3-208ENST00000493507 C16orf46Q6P387 395 aa8.25□□□□□ -1.09
CCNB3-208ENST00000493507 FOXR1Q6PIV2 292 aa8.25□□□□□ -1.09
CCNB3-208ENST00000493507 MYO19Q96H55 970 aa8.25□□□□□ -1.09
CCNB3-208ENST00000493507 QTRT2Q9H974 415 aaKnown RBP8.25□□□□□ -1.09
CCNB3-208ENST00000493507 PRXQ9BXM0 1461 aa8.25□□□□□ -1.09
CCNB3-208ENST00000493507 KIAA0556O60303 1618 aa8.25□□□□□ -1.09
CCNB3-208ENST00000493507 KIAA0586Q9BVV6 1533 aa8.24□□□□□ -1.09
CCNB3-208ENST00000493507 PRG4Q92954 1404 aaPredicted RBP8.24□□□□□ -1.09
CCNB3-208ENST00000493507 DBN1Q16643 649 aa8.24□□□□□ -1.09
CCNB3-208ENST00000493507 FIGNL1Q6PIW4 674 aa8.24□□□□□ -1.09
CCNB3-208ENST00000493507 SV2AQ7L0J3 742 aa8.24□□□□□ -1.09
CCNB3-208ENST00000493507 CUEDC1Q9NWM3 386 aaPredicted RBP8.24□□□□□ -1.09
CCNB3-208ENST00000493507 CARMIL1Q5VZK9 1371 aa8.23□□□□□ -1.09
CCNB3-208ENST00000493507 CDC14CA4D256 554 aa8.23□□□□□ -1.09
CCNB3-208ENST00000493507 VEGFBP49765 207 aa8.23□□□□□ -1.09
CCNB3-208ENST00000493507 C11orf91Q3C1V1 193 aa8.23□□□□□ -1.09
CCNB3-208ENST00000493507 VWA5B2Q8N398 1253 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms