RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 ZNF784Q8NCA9 323 aaPredicted RBP11.76□□□□□ -0.53
TM4SF1-203ENST00000493298 FMNL2Q96PY5 1086 aa11.76□□□□□ -0.53
TM4SF1-203ENST00000493298 TNNQ9UQP3 1299 aa11.76□□□□□ -0.53
TM4SF1-203ENST00000493298 TNRC6CQ9HCJ0 1690 aaKnown RBP11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 SLX4Q8IY92 1834 aa11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 PIP4K2AP48426 406 aaPredicted RBP11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 RARSP54136 660 aaKnown RBP11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 EIF4A1P60842 406 aaKnown RBP11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 LRP10Q7Z4F1 713 aa11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 TTC5Q8N0Z6 440 aa11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 LAS1LQ9Y4W2 734 aaKnown RBP11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 DICER1Q9UPY3 1922 aaKnown RBP11.75□□□□□ -0.53
TM4SF1-203ENST00000493298 NEFMP07197 916 aa11.74□□□□□ -0.53
TM4SF1-203ENST00000493298 CANXP27824 592 aaKnown RBP11.74□□□□□ -0.53
TM4SF1-203ENST00000493298 IL6STP40189 918 aaPredicted RBP11.74□□□□□ -0.53
TM4SF1-203ENST00000493298 TGFB2P61812 414 aa11.74□□□□□ -0.53
TM4SF1-203ENST00000493298 GPR162Q16538 588 aa11.74□□□□□ -0.53
TM4SF1-203ENST00000493298 SSH1Q8WYL5 1049 aa11.74□□□□□ -0.53
TM4SF1-203ENST00000493298 MYH16Q9H6N6 1097 aa11.74□□□□□ -0.53
TM4SF1-203ENST00000493298 BABAM1Q9NWV8 329 aa11.74□□□□□ -0.53
TM4SF1-203ENST00000493298 A0A0G2JLW4 131 aa11.73□□□□□ -0.53
TM4SF1-203ENST00000493298 ELL2O00472 640 aaPredicted RBP11.73□□□□□ -0.53
TM4SF1-203ENST00000493298 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
TM4SF1-203ENST00000493298 STARD3NLO95772 234 aa11.73□□□□□ -0.53
TM4SF1-203ENST00000493298 DPEP1P16444 411 aa11.73□□□□□ -0.53
TM4SF1-203ENST00000493298 LAMB2P55268 1798 aa11.73□□□□□ -0.53
TM4SF1-203ENST00000493298 C20orf194Q5TEA3 1177 aa11.73□□□□□ -0.53
TM4SF1-203ENST00000493298 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
TM4SF1-203ENST00000493298 TEX13AQ9BXU3 409 aaPredicted RBP11.73□□□□□ -0.53
TM4SF1-203ENST00000493298 PLIN1O60240 522 aa11.72□□□□□ -0.53
TM4SF1-203ENST00000493298 SNRPA1P09661 255 aaKnown RBP11.72□□□□□ -0.53
TM4SF1-203ENST00000493298 TBC1D9BQ66K14 1250 aa11.72□□□□□ -0.53
TM4SF1-203ENST00000493298 TSPYL4Q9UJ04 414 aa11.72□□□□□ -0.53
TM4SF1-203ENST00000493298 WWC3Q9ULE0 1092 aa11.72□□□□□ -0.53
TM4SF1-203ENST00000493298 TCERG1O14776 1098 aaKnown RBP11.71□□□□□ -0.53
TM4SF1-203ENST00000493298 MRPL50Q8N5N7 158 aaKnown RBP11.71□□□□□ -0.53
TM4SF1-203ENST00000493298 TBC1D2BQ9UPU7 963 aa11.71□□□□□ -0.53
TM4SF1-203ENST00000493298 PARP3Q9Y6F1 533 aa11.71□□□□□ -0.53
TM4SF1-203ENST00000493298 TIAM2Q8IVF5 1701 aa11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 GRIN3BO60391 1043 aa11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 ZPR1O75312 459 aa11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 CHRNA5P30532 468 aa11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 PRELPP51888 382 aa11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 CALD1Q05682 793 aaKnown RBP11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 PDIA6Q15084 440 aa11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 G2E3Q7L622 706 aa11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 BCL2L13Q9BXK5 485 aa11.7□□□□□ -0.54
TM4SF1-203ENST00000493298 PCNTO95613 3336 aa11.69□□□□□ -0.54
TM4SF1-203ENST00000493298 SERPINB2P05120 415 aa11.69□□□□□ -0.54
TM4SF1-203ENST00000493298 RRP1P56182 461 aaKnown RBP11.69□□□□□ -0.54
TM4SF1-203ENST00000493298 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
TM4SF1-203ENST00000493298 A0A087WZG4 1122 aa11.68□□□□□ -0.54
TM4SF1-203ENST00000493298 DCAF8L1A6NGE4 600 aa11.68□□□□□ -0.54
TM4SF1-203ENST00000493298 RGL2O15211 777 aa11.68□□□□□ -0.54
TM4SF1-203ENST00000493298 RLBP1P12271 317 aa11.68□□□□□ -0.54
TM4SF1-203ENST00000493298 IRX6P78412 446 aaPredicted RBP11.68□□□□□ -0.54
TM4SF1-203ENST00000493298 PRR5LQ6MZQ0 368 aa11.68□□□□□ -0.54
TM4SF1-203ENST00000493298 PELP1Q8IZL8 1130 aaKnown RBP11.68□□□□□ -0.54
TM4SF1-203ENST00000493298 SNED1Q8TER0 1413 aa11.68□□□□□ -0.54
TM4SF1-203ENST00000493298 TAF1P21675 1872 aa11.68□□□□□ -0.54
TM4SF1-203ENST00000493298 DDX60Q8IY21 1712 aaKnown RBP11.67□□□□□ -0.54
TM4SF1-203ENST00000493298 CT47B1P0C2W7 299 aaPredicted RBP11.67□□□□□ -0.54
TM4SF1-203ENST00000493298 HLFQ16534 295 aa11.67□□□□□ -0.54
TM4SF1-203ENST00000493298 PROSER3Q2NL68 480 aa11.67□□□□□ -0.54
TM4SF1-203ENST00000493298 DZIP3Q86Y13 1208 aaKnown RBP11.67□□□□□ -0.54
TM4SF1-203ENST00000493298 CLEC4GQ6UXB4 293 aa11.66□□□□□ -0.54
TM4SF1-203ENST00000493298 CACNA1FO60840 1977 aa11.65□□□□□ -0.54
TM4SF1-203ENST00000493298 KLRG2A4D1S0 409 aaPredicted RBP11.65□□□□□ -0.54
TM4SF1-203ENST00000493298 ANXA1P04083 346 aa11.65□□□□□ -0.54
TM4SF1-203ENST00000493298 ALDH1L2Q3SY69 923 aa11.65□□□□□ -0.54
TM4SF1-203ENST00000493298 BICDL1Q6ZP65 573 aa11.65□□□□□ -0.54
TM4SF1-203ENST00000493298 TTLL7Q6ZT98 887 aa11.65□□□□□ -0.54
TM4SF1-203ENST00000493298 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
TM4SF1-203ENST00000493298 BCS1LQ9Y276 419 aa11.65□□□□□ -0.54
TM4SF1-203ENST00000493298 COL4A1P02462 1669 aa11.65□□□□□ -0.55
TM4SF1-203ENST00000493298 UBN2Q6ZU65 1347 aa11.64□□□□□ -0.55
TM4SF1-203ENST00000493298 NECTIN2Q92692 538 aa11.64□□□□□ -0.55
TM4SF1-203ENST00000493298 PIM2Q9P1W9 311 aa11.64□□□□□ -0.55
TM4SF1-203ENST00000493298 NOB1Q9ULX3 412 aaKnown RBP11.64□□□□□ -0.55
TM4SF1-203ENST00000493298 ABCC12Q96J65 1359 aa11.64□□□□□ -0.55
TM4SF1-203ENST00000493298 ERBB4Q15303 1308 aa11.63□□□□□ -0.55
TM4SF1-203ENST00000493298 RIC1Q4ADV7 1423 aa11.63□□□□□ -0.55
TM4SF1-203ENST00000493298 TRIM27P14373 513 aa11.63□□□□□ -0.55
TM4SF1-203ENST00000493298 PANK1Q8TE04 598 aa11.63□□□□□ -0.55
TM4SF1-203ENST00000493298 BRIP1Q9BX63 1249 aa11.63□□□□□ -0.55
TM4SF1-203ENST00000493298 PHAXQ9H814 394 aaKnown RBP11.63□□□□□ -0.55
TM4SF1-203ENST00000493298 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
TM4SF1-203ENST00000493298 GTF3C3Q9Y5Q9 886 aa11.63□□□□□ -0.55
TM4SF1-203ENST00000493298 MAP3K15Q6ZN16 1313 aa11.62□□□□□ -0.55
TM4SF1-203ENST00000493298 ERVV-1B6SEH8 477 aa11.62□□□□□ -0.55
TM4SF1-203ENST00000493298 HOXB7P09629 217 aa11.62□□□□□ -0.55
TM4SF1-203ENST00000493298 DALRD3Q5D0E6 543 aaKnown RBP11.62□□□□□ -0.55
TM4SF1-203ENST00000493298 C7orf43Q8WVR3 580 aa11.62□□□□□ -0.55
TM4SF1-203ENST00000493298 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
TM4SF1-203ENST00000493298 IBTKQ9P2D0 1353 aaPredicted RBP11.62□□□□□ -0.55
TM4SF1-203ENST00000493298 NFKBIEO00221 500 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms