RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 NCAPD2Q15021 1401 aa10.01□□□□□ -0.81
SPTA1-208ENST00000492934 EMILIN3Q9NT22 766 aa10.01□□□□□ -0.81
SPTA1-208ENST00000492934 EMILIN1Q9Y6C2 1016 aa10.01□□□□□ -0.81
SPTA1-208ENST00000492934 MPRIPQ6WCQ1 1025 aa10□□□□□ -0.81
SPTA1-208ENST00000492934 COL23A1Q86Y22 540 aaPredicted RBP10□□□□□ -0.81
SPTA1-208ENST00000492934 TAF1LQ8IZX4 1826 aa9.99□□□□□ -0.81
SPTA1-208ENST00000492934 SENP3-EIF4A1A0A087X0R7 540 aa9.99□□□□□ -0.81
SPTA1-208ENST00000492934 PPM1GO15355 546 aaPredicted RBP9.99□□□□□ -0.81
SPTA1-208ENST00000492934 CYP27B1O15528 508 aa9.99□□□□□ -0.81
SPTA1-208ENST00000492934 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
SPTA1-208ENST00000492934 TRAF7Q6Q0C0 670 aa9.99□□□□□ -0.81
SPTA1-208ENST00000492934 ZFRQ96KR1 1074 aaKnown RBP9.99□□□□□ -0.81
SPTA1-208ENST00000492934 COL9A1P20849 921 aa9.98□□□□□ -0.81
SPTA1-208ENST00000492934 AK7Q96M32 723 aa9.98□□□□□ -0.81
SPTA1-208ENST00000492934 CARD14Q9BXL6 1004 aa9.98□□□□□ -0.81
SPTA1-208ENST00000492934 WBP1LQ9NX94 342 aa9.98□□□□□ -0.81
SPTA1-208ENST00000492934 PCDHGA10Q9Y5H3 936 aa9.98□□□□□ -0.81
SPTA1-208ENST00000492934 ITGB4P16144 1822 aa9.98□□□□□ -0.81
SPTA1-208ENST00000492934 LCE2BO14633 110 aa9.97□□□□□ -0.81
SPTA1-208ENST00000492934 GIGYF1O75420 1035 aaPredicted RBP9.97□□□□□ -0.81
SPTA1-208ENST00000492934 PHF14O94880 888 aa9.97□□□□□ -0.81
SPTA1-208ENST00000492934 YBX3P16989 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
SPTA1-208ENST00000492934 SMARCC1Q92922 1105 aaPredicted RBP9.97□□□□□ -0.81
SPTA1-208ENST00000492934 POLR3GLQ9BT43 218 aa9.97□□□□□ -0.81
SPTA1-208ENST00000492934 UBR3Q6ZT12 1888 aa9.96□□□□□ -0.81
SPTA1-208ENST00000492934 GFRA3O60609 400 aa9.96□□□□□ -0.82
SPTA1-208ENST00000492934 C1QTNF8P60827 252 aa9.96□□□□□ -0.82
SPTA1-208ENST00000492934 E2F4Q16254 413 aa9.96□□□□□ -0.82
SPTA1-208ENST00000492934 FLAD1Q8NFF5 587 aa9.96□□□□□ -0.82
SPTA1-208ENST00000492934 SPG7Q9UQ90 795 aa9.96□□□□□ -0.82
SPTA1-208ENST00000492934 GRIN3BO60391 1043 aa9.95□□□□□ -0.82
SPTA1-208ENST00000492934 HMGB2P26583 209 aaKnown RBP9.95□□□□□ -0.82
SPTA1-208ENST00000492934 PIGBQ92521 554 aa9.95□□□□□ -0.82
SPTA1-208ENST00000492934 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
SPTA1-208ENST00000492934 TMOD3Q9NYL9 352 aa9.95□□□□□ -0.82
SPTA1-208ENST00000492934 KIAA1468Q9P260 1216 aa9.95□□□□□ -0.82
SPTA1-208ENST00000492934 MAP2P11137 1827 aaKnown RBP9.94□□□□□ -0.82
SPTA1-208ENST00000492934 ATP10DQ9P241 1426 aa9.94□□□□□ -0.82
SPTA1-208ENST00000492934 WASHC2AQ641Q2 1341 aa9.94□□□□□ -0.82
SPTA1-208ENST00000492934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
SPTA1-208ENST00000492934 AMIGO3Q86WK7 504 aa9.94□□□□□ -0.82
SPTA1-208ENST00000492934 EYA1Q99502 592 aa9.94□□□□□ -0.82
SPTA1-208ENST00000492934 LOC102724428A0A0B4J2F2 783 aa9.93□□□□□ -0.82
SPTA1-208ENST00000492934 GNPATO15228 680 aa9.93□□□□□ -0.82
SPTA1-208ENST00000492934 SSFA2P28290 1259 aa9.93□□□□□ -0.82
SPTA1-208ENST00000492934 TNNT2P45379 298 aaPredicted RBP9.93□□□□□ -0.82
SPTA1-208ENST00000492934 SIK1P57059 783 aa9.93□□□□□ -0.82
SPTA1-208ENST00000492934 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
SPTA1-208ENST00000492934 SMIM5Q71RC9 77 aa9.93□□□□□ -0.82
SPTA1-208ENST00000492934 LINC00116Q8NCU8 138 aa9.93□□□□□ -0.82
SPTA1-208ENST00000492934 TSHZ2Q9NRE2 1034 aa9.93□□□□□ -0.82
SPTA1-208ENST00000492934 CD2APQ9Y5K6 639 aa9.93□□□□□ -0.82
SPTA1-208ENST00000492934 KDRP35968 1356 aa9.92□□□□□ -0.82
SPTA1-208ENST00000492934 PLEKHG2Q9H7P9 1386 aa9.92□□□□□ -0.82
SPTA1-208ENST00000492934 IGSF1Q8N6C5 1336 aa9.92□□□□□ -0.82
SPTA1-208ENST00000492934 DPYSL4O14531 572 aa9.92□□□□□ -0.82
SPTA1-208ENST00000492934 PHKG2P15735 406 aa9.92□□□□□ -0.82
SPTA1-208ENST00000492934 PLCB2Q00722 1185 aa9.92□□□□□ -0.82
SPTA1-208ENST00000492934 EIF4A2Q14240 407 aaKnown RBP9.92□□□□□ -0.82
SPTA1-208ENST00000492934 IFNL2Q8IZJ0 200 aa9.92□□□□□ -0.82
SPTA1-208ENST00000492934 POLKQ9UBT6 870 aa9.92□□□□□ -0.82
SPTA1-208ENST00000492934 WWC3Q9ULE0 1092 aa9.92□□□□□ -0.82
SPTA1-208ENST00000492934 ARIH1Q9Y4X5 557 aaPredicted RBP9.92□□□□□ -0.82
SPTA1-208ENST00000492934 ADCY9O60503 1353 aa9.91□□□□□ -0.82
SPTA1-208ENST00000492934 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
SPTA1-208ENST00000492934 ITPK1Q13572 414 aa9.91□□□□□ -0.82
SPTA1-208ENST00000492934 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
SPTA1-208ENST00000492934 ASAP1Q9ULH1 1129 aa9.91□□□□□ -0.82
SPTA1-208ENST00000492934 TIMELESSQ9UNS1 1208 aa9.91□□□□□ -0.82
SPTA1-208ENST00000492934 CICQ96RK0 1608 aaPredicted RBP9.91□□□□□ -0.82
SPTA1-208ENST00000492934 CLSPNQ9HAW4 1339 aa9.9□□□□□ -0.82
SPTA1-208ENST00000492934 ATP6V1AP38606 617 aa9.9□□□□□ -0.82
SPTA1-208ENST00000492934 COL5A3P25940 1745 aaPredicted RBP9.9□□□□□ -0.83
SPTA1-208ENST00000492934 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.83
SPTA1-208ENST00000492934 ZNF526Q8TF50 670 aaPredicted RBP9.89□□□□□ -0.83
SPTA1-208ENST00000492934 PCGF6Q9BYE7 350 aa9.89□□□□□ -0.83
SPTA1-208ENST00000492934 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
SPTA1-208ENST00000492934 SEPT9Q9UHD8 586 aaPredicted RBP9.89□□□□□ -0.83
SPTA1-208ENST00000492934 PXDNLA1KZ92 1463 aa9.89□□□□□ -0.83
SPTA1-208ENST00000492934 ZNF831Q5JPB2 1677 aa9.89□□□□□ -0.83
SPTA1-208ENST00000492934 CEP350Q5VT06 3117 aa9.89□□□□□ -0.83
SPTA1-208ENST00000492934 C4AP0C0L4 1744 aa9.88□□□□□ -0.83
SPTA1-208ENST00000492934 ZNF530Q6P9A1 599 aaPredicted RBP9.88□□□□□ -0.83
SPTA1-208ENST00000492934 GPBP1L1Q9HC44 474 aaPredicted RBP9.88□□□□□ -0.83
SPTA1-208ENST00000492934 ATG3Q9NT62 314 aa9.88□□□□□ -0.83
SPTA1-208ENST00000492934 HPS5Q9UPZ3 1129 aa9.88□□□□□ -0.83
SPTA1-208ENST00000492934 C10orf71Q711Q0 1435 aa9.88□□□□□ -0.83
SPTA1-208ENST00000492934 KIAA1551Q9HCM1 1747 aa9.87□□□□□ -0.83
SPTA1-208ENST00000492934 NRG2O14511 850 aaPredicted RBP9.87□□□□□ -0.83
SPTA1-208ENST00000492934 HSP90AB1P08238 724 aaKnown RBP9.87□□□□□ -0.83
SPTA1-208ENST00000492934 MMP10P09238 476 aa9.87□□□□□ -0.83
SPTA1-208ENST00000492934 HSPA5P11021 654 aaKnown RBP9.87□□□□□ -0.83
SPTA1-208ENST00000492934 EIF4G2P78344 907 aaKnown RBP eCLIP9.87□□□□□ -0.83
SPTA1-208ENST00000492934 LRCH3Q96II8 777 aa9.87□□□□□ -0.83
SPTA1-208ENST00000492934 DCAF5Q96JK2 942 aa9.87□□□□□ -0.83
SPTA1-208ENST00000492934 EPAS1Q99814 870 aa9.87□□□□□ -0.83
SPTA1-208ENST00000492934 RTCBQ9Y3I0 505 aaKnown RBP9.87□□□□□ -0.83
SPTA1-208ENST00000492934 PDIA6Q15084 440 aa9.86□□□□□ -0.83
SPTA1-208ENST00000492934 PLEKHO1Q53GL0 409 aaPredicted RBP9.86□□□□□ -0.83
SPTA1-208ENST00000492934 AEBP1Q8IUX7 1158 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms