RNA–Protein interactions for RNA: ENST00000491824.1

HCLS1-210, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-210ENST00000491824 DBF4Q9UBU7 674 aaPredicted RBP21.35■■□□□ 1.01
HCLS1-210ENST00000491824 SENP3-EIF4A1A0A087X0R7 540 aa21.34■■□□□ 1.01
HCLS1-210ENST00000491824 NBPF5PQ86XG9 351 aaPredicted RBP21.34■■□□□ 1.01
HCLS1-210ENST00000491824 WDR63Q8IWG1 891 aa21.34■■□□□ 1.01
HCLS1-210ENST00000491824 DDX21Q9NR30 783 aaKnown RBP eCLIP21.34■■□□□ 1.01
HCLS1-210ENST00000491824 NIP7Q9Y221 180 aaKnown RBP eCLIP21.34■■□□□ 1.01
HCLS1-210ENST00000491824 KIF13BQ9NQT8 1826 aa21.34■■□□□ 1.01
HCLS1-210ENST00000491824 PXDNLA1KZ92 1463 aa21.33■■□□□ 1.01
HCLS1-210ENST00000491824 KRT24Q2M2I5 525 aa21.33■■□□□ 1.01
HCLS1-210ENST00000491824 PDZRN3Q9UPQ7 1066 aa21.33■■□□□ 1.01
HCLS1-210ENST00000491824 GTF2E1P29083 439 aaPredicted RBP21.32■■□□□ 1
HCLS1-210ENST00000491824 ZBTB3Q9H5J0 574 aa21.32■■□□□ 1
HCLS1-210ENST00000491824 MYH16Q9H6N6 1097 aa21.32■■□□□ 1
HCLS1-210ENST00000491824 HYPKQ9NX55 129 aa21.32■■□□□ 1
HCLS1-210ENST00000491824 A0A0G2JLW4 131 aa21.31■■□□□ 1
HCLS1-210ENST00000491824 PDE6BP35913 854 aa21.31■■□□□ 1
HCLS1-210ENST00000491824 TPTE2Q6XPS3 522 aa21.31■■□□□ 1
HCLS1-210ENST00000491824 NYXQ9GZU5 481 aa21.31■■□□□ 1
HCLS1-210ENST00000491824 CHPF2Q9P2E5 772 aa21.31■■□□□ 1
HCLS1-210ENST00000491824 DPEP1P16444 411 aa21.3■■□□□ 1
HCLS1-210ENST00000491824 AIMP1Q12904 312 aaKnown RBP21.3■■□□□ 1
HCLS1-210ENST00000491824 HSP90AB3PQ58FF7 597 aa21.3■■□□□ 1
HCLS1-210ENST00000491824 CCDC30Q5VVM6 783 aa21.3■■□□□ 1
HCLS1-210ENST00000491824 TTLL7Q6ZT98 887 aa21.3■■□□□ 1
HCLS1-210ENST00000491824 PIM2Q9P1W9 311 aa21.3■■□□□ 1
HCLS1-210ENST00000491824 H0YIN7 160 aa21.29■■□□□ 1
HCLS1-210ENST00000491824 ELL2O00472 640 aaPredicted RBP21.29■■□□□ 1
HCLS1-210ENST00000491824 TSR2Q969E8 191 aaKnown RBP21.29■■□□□ 1
HCLS1-210ENST00000491824 BRIP1Q9BX63 1249 aa21.29■■□□□ 1
HCLS1-210ENST00000491824 WWC3Q9ULE0 1092 aa21.29■■□□□ 1
HCLS1-210ENST00000491824 BCS1LQ9Y276 419 aa21.29■■□□□ 1
HCLS1-210ENST00000491824 ATP10DQ9P241 1426 aa21.29■■□□□ 1
HCLS1-210ENST00000491824 YY1P25490 414 aa21.28■■□□□ 1
HCLS1-210ENST00000491824 GOLGA2Q08379 1002 aa21.28■■□□□ 1
HCLS1-210ENST00000491824 PDIA6Q15084 440 aa21.28■■□□□ 1
HCLS1-210ENST00000491824 PRR5LQ6MZQ0 368 aa21.28■■□□□ 1
HCLS1-210ENST00000491824 COPS6Q7L5N1 327 aa21.28■■□□□ 1
HCLS1-210ENST00000491824 XAGE3Q8WTP9 111 aa21.28■■□□□ 1
HCLS1-210ENST00000491824 STK31Q9BXU1 1019 aa21.28■■□□□ 1
HCLS1-210ENST00000491824 NRXN2Q9P2S2 1712 aa21.28■■□□□ 1
HCLS1-210ENST00000491824 AFDNP55196 1824 aaKnown RBP21.27■■□□□ 1
HCLS1-210ENST00000491824 ANXA1P04083 346 aa21.27■■□□□ 1
HCLS1-210ENST00000491824 YBX3P16989 372 aaKnown RBP eCLIP21.27■■□□□ 1
HCLS1-210ENST00000491824 HLFQ16534 295 aa21.27■■□□□ 1
HCLS1-210ENST00000491824 PROSER3Q2NL68 480 aa21.27■■□□□ 1
HCLS1-210ENST00000491824 DALRD3Q5D0E6 543 aaKnown RBP21.27■■□□□ 1
HCLS1-210ENST00000491824 GIGYF2Q6Y7W6 1299 aaKnown RBP21.27■■□□□ 1
HCLS1-210ENST00000491824 C2CD5Q86YS7 1000 aa21.27■■□□□ 1
HCLS1-210ENST00000491824 PARP10Q53GL7 1025 aa21.26■□□□□ 0.99
HCLS1-210ENST00000491824 FANCIQ9NVI1 1328 aa21.26■□□□□ 0.99
HCLS1-210ENST00000491824 N4BP2Q86UW6 1770 aaPredicted RBP21.25■□□□□ 0.99
HCLS1-210ENST00000491824 FAM177BA6PVY3 158 aa21.25■□□□□ 0.99
HCLS1-210ENST00000491824 CHRNA5P30532 468 aa21.25■□□□□ 0.99
HCLS1-210ENST00000491824 TWISTNBQ3B726 338 aaPredicted RBP21.25■□□□□ 0.99
HCLS1-210ENST00000491824 PPP1R42Q7Z4L9 355 aa21.25■□□□□ 0.99
HCLS1-210ENST00000491824 C8orf58Q8NAV2 365 aa21.25■□□□□ 0.99
HCLS1-210ENST00000491824 DDX58O95786 925 aaKnown RBP21.24■□□□□ 0.99
HCLS1-210ENST00000491824 GPTP24298 496 aa21.24■□□□□ 0.99
HCLS1-210ENST00000491824 IBTKQ9P2D0 1353 aaPredicted RBP21.23■□□□□ 0.99
HCLS1-210ENST00000491824 LRP10Q7Z4F1 713 aa21.23■□□□□ 0.99
HCLS1-210ENST00000491824 ZNF521Q96K83 1311 aa21.23■□□□□ 0.99
HCLS1-210ENST00000491824 ANKRD13DQ6ZTN6 518 aa21.22■□□□□ 0.99
HCLS1-210ENST00000491824 TTLL6Q8N841 843 aa21.22■□□□□ 0.99
HCLS1-210ENST00000491824 PLBD2Q8NHP8 589 aa21.22■□□□□ 0.99
HCLS1-210ENST00000491824 ZNF622Q969S3 477 aaKnown RBP eCLIP21.22■□□□□ 0.99
HCLS1-210ENST00000491824 KIAA1551Q9HCM1 1747 aa21.21■□□□□ 0.99
HCLS1-210ENST00000491824 RIC3Q7Z5B4 369 aa21.21■□□□□ 0.99
HCLS1-210ENST00000491824 CCDC24Q8N4L8 307 aa21.21■□□□□ 0.99
HCLS1-210ENST00000491824 RNF123Q5XPI4 1314 aa21.21■□□□□ 0.99
HCLS1-210ENST00000491824 NUP98P52948 1817 aa21.2■□□□□ 0.98
HCLS1-210ENST00000491824 ZNF34Q8IZ26 560 aa21.2■□□□□ 0.98
HCLS1-210ENST00000491824 ZBED9Q6R2W3 1325 aa21.2■□□□□ 0.98
HCLS1-210ENST00000491824 KCNA3P22001 575 aa21.19■□□□□ 0.98
HCLS1-210ENST00000491824 ARHGAP27Q6ZUM4 889 aa21.19■□□□□ 0.98
HCLS1-210ENST00000491824 TSPYL6Q8N831 410 aa21.19■□□□□ 0.98
HCLS1-210ENST00000491824 CNKSR1Q969H4 720 aa21.19■□□□□ 0.98
HCLS1-210ENST00000491824 UTP14AQ9BVJ6 771 aaKnown RBP21.19■□□□□ 0.98
HCLS1-210ENST00000491824 CHD4Q14839 1912 aa21.18■□□□□ 0.98
HCLS1-210ENST00000491824 E9PSI1 815 aa21.18■□□□□ 0.98
HCLS1-210ENST00000491824 HNRNPUQ00839 825 aaKnown RBP eCLIP21.18■□□□□ 0.98
HCLS1-210ENST00000491824 TCIRG1Q13488 830 aa21.18■□□□□ 0.98
HCLS1-210ENST00000491824 STYK1Q6J9G0 422 aa21.18■□□□□ 0.98
HCLS1-210ENST00000491824 MASTLQ96GX5 879 aa21.18■□□□□ 0.98
HCLS1-210ENST00000491824 NPR1P16066 1061 aa21.17■□□□□ 0.98
HCLS1-210ENST00000491824 UBN2Q6ZU65 1347 aa21.17■□□□□ 0.98
HCLS1-210ENST00000491824 GOLGB1Q14789 3259 aaKnown RBP21.17■□□□□ 0.98
HCLS1-210ENST00000491824 EXOSC9Q06265 439 aaKnown RBP21.16■□□□□ 0.98
HCLS1-210ENST00000491824 SUSD4Q5VX71 490 aa21.16■□□□□ 0.98
HCLS1-210ENST00000491824 NUTM1Q86Y26 1132 aa21.16■□□□□ 0.98
HCLS1-210ENST00000491824 RPGRQ92834 1020 aaKnown RBP21.16■□□□□ 0.98
HCLS1-210ENST00000491824 BRCA1P38398 1863 aaKnown RBP21.15■□□□□ 0.98
HCLS1-210ENST00000491824 DLEC1Q9Y238 1755 aa21.15■□□□□ 0.98
HCLS1-210ENST00000491824 SRGNP10124 158 aa21.15■□□□□ 0.98
HCLS1-210ENST00000491824 ERFEQ4G0M1 354 aa21.15■□□□□ 0.98
HCLS1-210ENST00000491824 SOGA3Q5TF21 947 aa21.15■□□□□ 0.98
HCLS1-210ENST00000491824 TRMT112Q9UI30 125 aaKnown RBP21.15■□□□□ 0.98
HCLS1-210ENST00000491824 RIC1Q4ADV7 1423 aa21.14■□□□□ 0.98
HCLS1-210ENST00000491824 NTSR2O95665 410 aa21.14■□□□□ 0.97
HCLS1-210ENST00000491824 SLC4A2P04920 1241 aa21.14■□□□□ 0.97
HCLS1-210ENST00000491824 HSP90B1P14625 803 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms