RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 MS4A3Q96HJ5 214 aa10.62□□□□□ -0.71
RNF38-209ENST00000491349 ZNF652Q9Y2D9 606 aa10.62□□□□□ -0.71
RNF38-209ENST00000491349 USP16Q9Y5T5 823 aa10.62□□□□□ -0.71
RNF38-209ENST00000491349 MYL6BP14649 208 aa10.61□□□□□ -0.71
RNF38-209ENST00000491349 SLC16A10Q8TF71 515 aa10.61□□□□□ -0.71
RNF38-209ENST00000491349 NECTIN2Q92692 538 aa10.61□□□□□ -0.71
RNF38-209ENST00000491349 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
RNF38-209ENST00000491349 UBR3Q6ZT12 1888 aa10.61□□□□□ -0.71
RNF38-209ENST00000491349 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.6□□□□□ -0.71
RNF38-209ENST00000491349 A1BGP04217 495 aa10.6□□□□□ -0.71
RNF38-209ENST00000491349 C8orf58Q8NAV2 365 aa10.6□□□□□ -0.71
RNF38-209ENST00000491349 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
RNF38-209ENST00000491349 DDX21Q9NR30 783 aaKnown RBP eCLIP10.6□□□□□ -0.71
RNF38-209ENST00000491349 ZBTB1Q9Y2K1 713 aa10.6□□□□□ -0.71
RNF38-209ENST00000491349 COL15A1P39059 1388 aa10.6□□□□□ -0.71
RNF38-209ENST00000491349 NPHP1O15259 732 aa10.59□□□□□ -0.71
RNF38-209ENST00000491349 R3HDM1Q15032 1099 aaKnown RBP10.59□□□□□ -0.71
RNF38-209ENST00000491349 ALDH1L2Q3SY69 923 aa10.59□□□□□ -0.71
RNF38-209ENST00000491349 INTS5Q6P9B9 1019 aaKnown RBP10.59□□□□□ -0.71
RNF38-209ENST00000491349 DZIP3Q86Y13 1208 aaKnown RBP10.59□□□□□ -0.71
RNF38-209ENST00000491349 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
RNF38-209ENST00000491349 MYH14Q7Z406 1995 aaKnown RBP10.58□□□□□ -0.72
RNF38-209ENST00000491349 PRAMEF22A3QJZ6 481 aa10.58□□□□□ -0.72
RNF38-209ENST00000491349 VAMP4O75379 141 aa10.58□□□□□ -0.72
RNF38-209ENST00000491349 POLD1P28340 1107 aa10.58□□□□□ -0.72
RNF38-209ENST00000491349 ZNF827Q17R98 1081 aa10.58□□□□□ -0.72
RNF38-209ENST00000491349 KRT24Q2M2I5 525 aa10.58□□□□□ -0.72
RNF38-209ENST00000491349 HSP90AB3PQ58FF7 597 aa10.58□□□□□ -0.72
RNF38-209ENST00000491349 TRMT2AQ8IZ69 625 aaKnown RBP10.58□□□□□ -0.72
RNF38-209ENST00000491349 PELP1Q8IZL8 1130 aaKnown RBP10.58□□□□□ -0.72
RNF38-209ENST00000491349 NLGN1Q8N2Q7 840 aa10.58□□□□□ -0.72
RNF38-209ENST00000491349 CHPF2Q9P2E5 772 aa10.58□□□□□ -0.72
RNF38-209ENST00000491349 TUBGCP6Q96RT7 1819 aa10.58□□□□□ -0.72
RNF38-209ENST00000491349 RGL2O15211 777 aa10.57□□□□□ -0.72
RNF38-209ENST00000491349 IPO8O15397 1037 aaKnown RBP10.57□□□□□ -0.72
RNF38-209ENST00000491349 EIF5P55010 431 aaKnown RBP10.57□□□□□ -0.72
RNF38-209ENST00000491349 NEXNQ0ZGT2 675 aa10.57□□□□□ -0.72
RNF38-209ENST00000491349 AIMP1Q12904 312 aaKnown RBP10.57□□□□□ -0.72
RNF38-209ENST00000491349 ASTLQ6HA08 431 aaPredicted RBP10.57□□□□□ -0.72
RNF38-209ENST00000491349 RIC3Q7Z5B4 369 aa10.57□□□□□ -0.72
RNF38-209ENST00000491349 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
RNF38-209ENST00000491349 TSPYL6Q8N831 410 aa10.57□□□□□ -0.72
RNF38-209ENST00000491349 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.57□□□□□ -0.72
RNF38-209ENST00000491349 ARHGEF1Q92888 912 aaKnown RBP10.57□□□□□ -0.72
RNF38-209ENST00000491349 KIF12Q96FN5 646 aa10.57□□□□□ -0.72
RNF38-209ENST00000491349 ANO8Q9HCE9 1232 aaPredicted RBP10.57□□□□□ -0.72
RNF38-209ENST00000491349 SMC4Q9NTJ3 1288 aa10.57□□□□□ -0.72
RNF38-209ENST00000491349 NARFQ9UHQ1 456 aa10.57□□□□□ -0.72
RNF38-209ENST00000491349 KIF16BQ96L93 1317 aa10.57□□□□□ -0.72
RNF38-209ENST00000491349 PSDA5PKW4 1024 aaPredicted RBP10.56□□□□□ -0.72
RNF38-209ENST00000491349 CLEC4GQ6UXB4 293 aa10.56□□□□□ -0.72
RNF38-209ENST00000491349 PNPLA7Q6ZV29 1317 aa10.56□□□□□ -0.72
RNF38-209ENST00000491349 C4AP0C0L4 1744 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 ERVV-1B6SEH8 477 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 MS4A1P11836 297 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 PIP4K2AP48426 406 aaPredicted RBP10.55□□□□□ -0.72
RNF38-209ENST00000491349 FKBP5Q13451 457 aaPredicted RBP10.55□□□□□ -0.72
RNF38-209ENST00000491349 ANKRD13DQ6ZTN6 518 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 COPS6Q7L5N1 327 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 COL23A1Q86Y22 540 aaPredicted RBP10.55□□□□□ -0.72
RNF38-209ENST00000491349 XAGE3Q8WTP9 111 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 MTFR1LQ9H019 292 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 TBC1D2BQ9UPU7 963 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 PARP3Q9Y6F1 533 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 PTPRCP08575 1304 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 MAP3K15Q6ZN16 1313 aa10.55□□□□□ -0.72
RNF38-209ENST00000491349 USP42Q9H9J4 1324 aaKnown RBP10.55□□□□□ -0.72
RNF38-209ENST00000491349 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
RNF38-209ENST00000491349 ATMINO43313 823 aaPredicted RBP10.54□□□□□ -0.72
RNF38-209ENST00000491349 HSP90B1P14625 803 aaKnown RBP10.54□□□□□ -0.72
RNF38-209ENST00000491349 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
RNF38-209ENST00000491349 USPL1Q5W0Q7 1092 aa10.54□□□□□ -0.72
RNF38-209ENST00000491349 NBPF10Q6P3W6 841 aaKnown RBP10.54□□□□□ -0.72
RNF38-209ENST00000491349 NBPF15Q8N660 670 aa10.54□□□□□ -0.72
RNF38-209ENST00000491349 PLBD2Q8NHP8 589 aa10.54□□□□□ -0.72
RNF38-209ENST00000491349 SETDB2Q96T68 719 aa10.54□□□□□ -0.72
RNF38-209ENST00000491349 SPON1Q9HCB6 807 aa10.54□□□□□ -0.72
RNF38-209ENST00000491349 BCORQ6W2J9 1755 aa10.54□□□□□ -0.72
RNF38-209ENST00000491349 SCN7AQ01118 1682 aa10.53□□□□□ -0.72
RNF38-209ENST00000491349 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
RNF38-209ENST00000491349 TCERG1O14776 1098 aaKnown RBP10.53□□□□□ -0.72
RNF38-209ENST00000491349 ANXA1P04083 346 aa10.53□□□□□ -0.72
RNF38-209ENST00000491349 FLIIQ13045 1269 aa10.53□□□□□ -0.72
RNF38-209ENST00000491349 PPP1R42Q7Z4L9 355 aa10.53□□□□□ -0.72
RNF38-209ENST00000491349 API5Q9BZZ5 524 aaKnown RBP10.53□□□□□ -0.72
RNF38-209ENST00000491349 NYXQ9GZU5 481 aa10.53□□□□□ -0.72
RNF38-209ENST00000491349 ZBTB3Q9H5J0 574 aa10.53□□□□□ -0.72
RNF38-209ENST00000491349 PPP1R1BQ9UD71 204 aaPredicted RBP10.53□□□□□ -0.72
RNF38-209ENST00000491349 NUP98P52948 1817 aa10.53□□□□□ -0.72
RNF38-209ENST00000491349 CENPBP07199 599 aaPredicted RBP10.52□□□□□ -0.73
RNF38-209ENST00000491349 NUBP1P53384 320 aa10.52□□□□□ -0.73
RNF38-209ENST00000491349 PDIA6Q15084 440 aa10.52□□□□□ -0.73
RNF38-209ENST00000491349 PARP10Q53GL7 1025 aa10.52□□□□□ -0.73
RNF38-209ENST00000491349 KSR2Q6VAB6 950 aa10.52□□□□□ -0.73
RNF38-209ENST00000491349 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
RNF38-209ENST00000491349 RCAN3Q9UKA8 241 aa10.52□□□□□ -0.73
RNF38-209ENST00000491349 ANKRD36CQ5JPF3 1778 aa10.52□□□□□ -0.73
RNF38-209ENST00000491349 CASZ1Q86V15 1759 aa10.52□□□□□ -0.73
RNF38-209ENST00000491349 ZBTB7AO95365 584 aa10.51□□□□□ -0.73
RNF38-209ENST00000491349 RARSP54136 660 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms