RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 MAPK1P28482 360 aa9.6□□□□□ -0.87
NCSTN-213ENST00000491332 TIMMDC1Q9NPL8 285 aa9.6□□□□□ -0.87
NCSTN-213ENST00000491332 BCS1LQ9Y276 419 aa9.6□□□□□ -0.87
NCSTN-213ENST00000491332 A0A1B0GTH6 734 aa9.59□□□□□ -0.87
NCSTN-213ENST00000491332 TATP17735 454 aaPredicted RBP9.59□□□□□ -0.87
NCSTN-213ENST00000491332 ALKBH2Q6NS38 261 aa9.59□□□□□ -0.87
NCSTN-213ENST00000491332 IFT43Q96FT9 208 aa9.59□□□□□ -0.87
NCSTN-213ENST00000491332 DACH1Q9UI36 760 aa9.59□□□□□ -0.87
NCSTN-213ENST00000491332 FZD6O60353 706 aa9.58□□□□□ -0.88
NCSTN-213ENST00000491332 MSX1P28360 303 aa9.58□□□□□ -0.88
NCSTN-213ENST00000491332 GPC6Q9Y625 555 aaPredicted RBP9.58□□□□□ -0.88
NCSTN-213ENST00000491332 ERCC3P19447 782 aa9.57□□□□□ -0.88
NCSTN-213ENST00000491332 ATCAYQ86WG3 371 aa9.57□□□□□ -0.88
NCSTN-213ENST00000491332 SUSD3Q96L08 255 aa9.57□□□□□ -0.88
NCSTN-213ENST00000491332 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
NCSTN-213ENST00000491332 ANKRD33BA6NCL7 494 aa9.56□□□□□ -0.88
NCSTN-213ENST00000491332 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.56□□□□□ -0.88
NCSTN-213ENST00000491332 ZNF280CQ8ND82 737 aa9.56□□□□□ -0.88
NCSTN-213ENST00000491332 HSH2DQ96JZ2 352 aa9.56□□□□□ -0.88
NCSTN-213ENST00000491332 ASB16Q96NS5 453 aa9.56□□□□□ -0.88
NCSTN-213ENST00000491332 ZIC5Q96T25 663 aa9.56□□□□□ -0.88
NCSTN-213ENST00000491332 RBCK1Q9BYM8 510 aa9.56□□□□□ -0.88
NCSTN-213ENST00000491332 TGFBR3LH3BV60 316 aa9.55□□□□□ -0.88
NCSTN-213ENST00000491332 ZAP70P43403 619 aa9.55□□□□□ -0.88
NCSTN-213ENST00000491332 HIF1AQ16665 826 aa9.55□□□□□ -0.88
NCSTN-213ENST00000491332 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
NCSTN-213ENST00000491332 TREML1Q86YW5 311 aa9.55□□□□□ -0.88
NCSTN-213ENST00000491332 NPAS4Q8IUM7 802 aa9.55□□□□□ -0.88
NCSTN-213ENST00000491332 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
NCSTN-213ENST00000491332 DMGDHQ9UI17 866 aaKnown RBP9.55□□□□□ -0.88
NCSTN-213ENST00000491332 BRPF3Q9ULD4 1205 aa9.55□□□□□ -0.88
NCSTN-213ENST00000491332 SENP3-EIF4A1A0A087X0R7 540 aa9.54□□□□□ -0.88
NCSTN-213ENST00000491332 SOBPA7XYQ1 873 aa9.54□□□□□ -0.88
NCSTN-213ENST00000491332 NDUFB5O43674 189 aa9.54□□□□□ -0.88
NCSTN-213ENST00000491332 AAMPQ13685 434 aa9.54□□□□□ -0.88
NCSTN-213ENST00000491332 IER5Q5VY09 327 aa9.54□□□□□ -0.88
NCSTN-213ENST00000491332 AMOTL2Q9Y2J4 779 aa9.54□□□□□ -0.88
NCSTN-213ENST00000491332 DYRK1BQ9Y463 629 aa9.54□□□□□ -0.88
NCSTN-213ENST00000491332 MAN1A2O60476 641 aa9.53□□□□□ -0.88
NCSTN-213ENST00000491332 MICAL2O94851 1124 aa9.53□□□□□ -0.88
NCSTN-213ENST00000491332 ARSJQ5FYB0 599 aaPredicted RBP9.53□□□□□ -0.88
NCSTN-213ENST00000491332 TMC7Q7Z402 723 aa9.53□□□□□ -0.88
NCSTN-213ENST00000491332 NPM2Q86SE8 214 aaKnown RBP9.53□□□□□ -0.88
NCSTN-213ENST00000491332 RGL4Q8IZJ4 473 aa9.53□□□□□ -0.88
NCSTN-213ENST00000491332 CRISPLD1Q9H336 500 aa9.53□□□□□ -0.88
NCSTN-213ENST00000491332 GPAMQ9HCL2 828 aa9.53□□□□□ -0.88
NCSTN-213ENST00000491332 POLIQ9UNA4 740 aa9.53□□□□□ -0.88
NCSTN-213ENST00000491332 A0A1W2PNR3 127 aa9.52□□□□□ -0.89
NCSTN-213ENST00000491332 LRRC69Q6ZNQ3 347 aa9.52□□□□□ -0.89
NCSTN-213ENST00000491332 ZSCAN29Q8IWY8 852 aaPredicted RBP9.52□□□□□ -0.89
NCSTN-213ENST00000491332 EDEM1Q92611 657 aa9.52□□□□□ -0.89
NCSTN-213ENST00000491332 CITED4Q96RK1 184 aa9.52□□□□□ -0.89
NCSTN-213ENST00000491332 RUBCNLQ9H714 662 aa9.52□□□□□ -0.89
NCSTN-213ENST00000491332 IGHA2P01877 340 aa9.51□□□□□ -0.89
NCSTN-213ENST00000491332 F11P03951 625 aa9.51□□□□□ -0.89
NCSTN-213ENST00000491332 PDGFAP04085 211 aa9.51□□□□□ -0.89
NCSTN-213ENST00000491332 MZF1P28698 734 aaPredicted RBP9.51□□□□□ -0.89
NCSTN-213ENST00000491332 ZNF428Q96B54 188 aa9.51□□□□□ -0.89
NCSTN-213ENST00000491332 FAM129BQ96TA1 746 aa9.51□□□□□ -0.89
NCSTN-213ENST00000491332 ANKIB1Q9P2G1 1089 aa9.51□□□□□ -0.89
NCSTN-213ENST00000491332 OPLAHO14841 1288 aa9.5□□□□□ -0.89
NCSTN-213ENST00000491332 IDH3AP50213 366 aa9.5□□□□□ -0.89
NCSTN-213ENST00000491332 DNM1Q05193 864 aaKnown RBP9.5□□□□□ -0.89
NCSTN-213ENST00000491332 GJD3Q8N144 294 aa9.5□□□□□ -0.89
NCSTN-213ENST00000491332 GAS2L1Q99501 681 aaPredicted RBP9.5□□□□□ -0.89
NCSTN-213ENST00000491332 SLC35F4A4IF30 521 aa9.49□□□□□ -0.89
NCSTN-213ENST00000491332 INPP5BP32019 993 aa9.49□□□□□ -0.89
NCSTN-213ENST00000491332 PTSQ03393 145 aa9.49□□□□□ -0.89
NCSTN-213ENST00000491332 BTLAQ7Z6A9 289 aa9.49□□□□□ -0.89
NCSTN-213ENST00000491332 GPR152Q8TDT2 470 aa9.49□□□□□ -0.89
NCSTN-213ENST00000491332 SENP2Q9HC62 589 aa9.49□□□□□ -0.89
NCSTN-213ENST00000491332 NEUROD4Q9HD90 331 aa9.49□□□□□ -0.89
NCSTN-213ENST00000491332 RBM47A0AV96 593 aaKnown RBP9.48□□□□□ -0.89
NCSTN-213ENST00000491332 THBS1P07996 1170 aa9.48□□□□□ -0.89
NCSTN-213ENST00000491332 PGBD3Q8N328 593 aa9.48□□□□□ -0.89
NCSTN-213ENST00000491332 KIFC2Q96AC6 838 aa9.48□□□□□ -0.89
NCSTN-213ENST00000491332 TRIM47Q96LD4 638 aa9.48□□□□□ -0.89
NCSTN-213ENST00000491332 GPR182O15218 404 aa9.47□□□□□ -0.89
NCSTN-213ENST00000491332 TREHO43280 583 aa9.47□□□□□ -0.89
NCSTN-213ENST00000491332 USP5P45974 858 aa9.47□□□□□ -0.89
NCSTN-213ENST00000491332 ARSDP51689 593 aa9.47□□□□□ -0.89
NCSTN-213ENST00000491332 TYRO3Q06418 890 aa9.47□□□□□ -0.89
NCSTN-213ENST00000491332 NLRP8Q86W28 1048 aa9.47□□□□□ -0.89
NCSTN-213ENST00000491332 NUDT16Q96DE0 195 aaKnown RBP9.47□□□□□ -0.89
NCSTN-213ENST00000491332 DMRTB1Q96MA1 342 aa9.47□□□□□ -0.89
NCSTN-213ENST00000491332 FAM13BQ9NYF5 915 aa9.47□□□□□ -0.89
NCSTN-213ENST00000491332 GMPR2Q9P2T1 348 aaKnown RBP9.47□□□□□ -0.89
NCSTN-213ENST00000491332 LCE2BO14633 110 aa9.46□□□□□ -0.9
NCSTN-213ENST00000491332 GRNP28799 593 aaKnown RBP9.46□□□□□ -0.9
NCSTN-213ENST00000491332 DSC3Q14574 896 aa9.46□□□□□ -0.9
NCSTN-213ENST00000491332 COL19A1Q14993 1142 aa9.46□□□□□ -0.9
NCSTN-213ENST00000491332 FBXO33Q7Z6M2 555 aa9.46□□□□□ -0.9
NCSTN-213ENST00000491332 TMC1Q8TDI8 760 aa9.46□□□□□ -0.9
NCSTN-213ENST00000491332 BCL2L13Q9BXK5 485 aa9.46□□□□□ -0.9
NCSTN-213ENST00000491332 USP20Q9Y2K6 914 aa9.46□□□□□ -0.9
NCSTN-213ENST00000491332 GJA3Q9Y6H8 435 aa9.46□□□□□ -0.9
NCSTN-213ENST00000491332 RBM25P49756 843 aaKnown RBP9.45□□□□□ -0.9
NCSTN-213ENST00000491332 FMR1Q06787 632 aaKnown RBP eCLIP9.45□□□□□ -0.9
NCSTN-213ENST00000491332 PDE3BQ13370 1112 aa9.45□□□□□ -0.9
NCSTN-213ENST00000491332 LBRQ14739 615 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms