RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 CCT2P78371 535 aaKnown RBP11.57□□□□□ -0.56
ERCC3-208ENST00000491292 PTH1RQ03431 593 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
ERCC3-208ENST00000491292 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 CCDC69A6NI79 296 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 CHL1O00533 1208 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 ZNF853P0CG23 659 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
ERCC3-208ENST00000491292 HSP90AA4PQ58FG1 418 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 SGSM2O43147 1006 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 ZNF75DP51815 510 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 TTLL5Q6EMB2 1281 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 CACTINQ8WUQ7 758 aaKnown RBP11.57□□□□□ -0.56
ERCC3-208ENST00000491292 NOL10Q9BSC4 688 aaKnown RBP11.57□□□□□ -0.56
ERCC3-208ENST00000491292 PAXBP1Q9Y5B6 917 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 TRPM2O94759 1503 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 PI4KAP2A4QPH2 592 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
ERCC3-208ENST00000491292 NLRP6P59044 892 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 ME3Q16798 604 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 PI4KAP1Q8N8J0 262 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 UBXN4Q92575 508 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 TIGD1Q96MW7 591 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 ZSWIM4Q9H7M6 989 aa11.57□□□□□ -0.56
ERCC3-208ENST00000491292 ERCC6L2Q5T890 1561 aa11.56□□□□□ -0.56
ERCC3-208ENST00000491292 BRPF1P55201 1214 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-208ENST00000491292 TMC6Q7Z403 805 aa11.56□□□□□ -0.56
ERCC3-208ENST00000491292 SH2B1Q9NRF2 756 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-208ENST00000491292 HSP90AB4PQ58FF6 505 aa11.56□□□□□ -0.56
ERCC3-208ENST00000491292 RAB11FIP4Q86YS3 637 aa11.56□□□□□ -0.56
ERCC3-208ENST00000491292 ST7Q9NRC1 585 aa11.56□□□□□ -0.56
ERCC3-208ENST00000491292 DDX19AQ9NUU7 478 aaKnown RBP11.56□□□□□ -0.56
ERCC3-208ENST00000491292 CDC42BPBQ9Y5S2 1711 aa11.56□□□□□ -0.56
ERCC3-208ENST00000491292 NR1I2O75469 434 aa11.56□□□□□ -0.56
ERCC3-208ENST00000491292 SYT10Q6XYQ8 523 aa11.56□□□□□ -0.56
ERCC3-208ENST00000491292 AOPEPQ8N6M6 819 aa11.56□□□□□ -0.56
ERCC3-208ENST00000491292 ARGLU1Q9NWB6 273 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-208ENST00000491292 MRVI1Q9Y6F6 885 aa11.56□□□□□ -0.56
ERCC3-208ENST00000491292 LAMC1P11047 1609 aa11.55□□□□□ -0.56
ERCC3-208ENST00000491292 WASLO00401 505 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-208ENST00000491292 SNW1Q13573 536 aaKnown RBP11.55□□□□□ -0.56
ERCC3-208ENST00000491292 CCAR1Q8IX12 1150 aaKnown RBP11.55□□□□□ -0.56
ERCC3-208ENST00000491292 FAM227BQ96M60 508 aa11.55□□□□□ -0.56
ERCC3-208ENST00000491292 BRF1Q92994 677 aa11.55□□□□□ -0.56
ERCC3-208ENST00000491292 SLC52A1Q9NWF4 448 aa11.55□□□□□ -0.56
ERCC3-208ENST00000491292 RAD50Q92878 1312 aa11.55□□□□□ -0.56
ERCC3-208ENST00000491292 JAK2O60674 1132 aa11.55□□□□□ -0.56
ERCC3-208ENST00000491292 CEP57L1Q8IYX8 460 aa11.55□□□□□ -0.56
ERCC3-208ENST00000491292 ZNF397Q8NF99 534 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-208ENST00000491292 UNC13BO14795 1591 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 PTCH1Q13635 1447 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 TAF3Q5VWG9 929 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 NEUROD6Q96NK8 337 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 NBPF7P0C2Y1 421 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-208ENST00000491292 ERCC6LQ2NKX8 1250 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 FSIP1Q8NA03 581 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 NDUFB9Q9Y6M9 179 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 PREX2Q70Z35 1606 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 SFPQP23246 707 aaKnown RBP eCLIP11.54□□□□□ -0.56
ERCC3-208ENST00000491292 STK38Q15208 465 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 TMCO3Q6UWJ1 677 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 DNAI1Q9UI46 699 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 RGS12O14924 1447 aa11.54□□□□□ -0.56
ERCC3-208ENST00000491292 USP27XA6NNY8 438 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 ARHGAP29Q52LW3 1261 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 ECHDC1Q9NTX5 307 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 SPTLC3Q9NUV7 552 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 TPCN1Q9ULQ1 816 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
ERCC3-208ENST00000491292 CFAP74Q9C0B2 1584 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 SLU7O95391 586 aaKnown RBP11.53□□□□□ -0.56
ERCC3-208ENST00000491292 SERPINC1P01008 464 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
ERCC3-208ENST00000491292 CREB3L3Q68CJ9 461 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 TRIM34Q9BYJ4 488 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 NAT10Q9H0A0 1025 aaKnown RBP11.53□□□□□ -0.56
ERCC3-208ENST00000491292 IQGAP1P46940 1657 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 PTPN21Q16825 1174 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 CCDC34Q96HJ3 373 aa11.53□□□□□ -0.56
ERCC3-208ENST00000491292 SOS1Q07889 1333 aaPredicted RBP11.53□□□□□ -0.56
ERCC3-208ENST00000491292 LEO1Q8WVC0 666 aaPredicted RBP11.52□□□□□ -0.56
ERCC3-208ENST00000491292 CALCOCO1Q9P1Z2 691 aa11.52□□□□□ -0.56
ERCC3-208ENST00000491292 CFAP45Q9UL16 551 aa11.52□□□□□ -0.56
ERCC3-208ENST00000491292 CEP152O94986 1710 aa11.52□□□□□ -0.56
ERCC3-208ENST00000491292 POLR3DP05423 398 aaPredicted RBP11.52□□□□□ -0.57
ERCC3-208ENST00000491292 CCDC144BQ3MJ40 725 aa11.52□□□□□ -0.57
ERCC3-208ENST00000491292 CHST3Q7LGC8 479 aa11.52□□□□□ -0.57
ERCC3-208ENST00000491292 CCDC144CPQ8IYA2 1237 aa11.52□□□□□ -0.57
ERCC3-208ENST00000491292 EDC3Q96F86 508 aaKnown RBP11.52□□□□□ -0.57
ERCC3-208ENST00000491292 PUS7Q96PZ0 661 aaKnown RBP11.52□□□□□ -0.57
ERCC3-208ENST00000491292 USP44Q9H0E7 712 aa11.52□□□□□ -0.57
ERCC3-208ENST00000491292 OSBPL3Q9H4L5 887 aa11.52□□□□□ -0.57
ERCC3-208ENST00000491292 HYPKQ9NX55 129 aa11.52□□□□□ -0.57
ERCC3-208ENST00000491292 GNAT3A8MTJ3 354 aa11.52□□□□□ -0.57
ERCC3-208ENST00000491292 FTOQ9C0B1 505 aaKnown RBP eCLIP11.52□□□□□ -0.57
ERCC3-208ENST00000491292 NPHP3Q7Z494 1330 aa11.52□□□□□ -0.57
ERCC3-208ENST00000491292 YTHDC2Q9H6S0 1430 aaKnown RBP11.52□□□□□ -0.57
ERCC3-208ENST00000491292 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
ERCC3-208ENST00000491292 GPS2Q13227 327 aa11.51□□□□□ -0.57
ERCC3-208ENST00000491292 CERS3Q8IU89 383 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms