RNA–Protein interactions for RNA: ENST00000490980.1

FRAT1-202, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

TSL 2

Gene FRAT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-202ENST00000490980 CARMIL3Q8ND23 1372 aa18.24■□□□□ 0.51
FRAT1-202ENST00000490980 BRCA1P38398 1863 aaKnown RBP18.24■□□□□ 0.51
FRAT1-202ENST00000490980 MAP3K15Q6ZN16 1313 aa18.23■□□□□ 0.51
FRAT1-202ENST00000490980 ANKRD31Q8N7Z5 1873 aa18.23■□□□□ 0.51
FRAT1-202ENST00000490980 DLEC1Q9Y238 1755 aa18.23■□□□□ 0.51
FRAT1-202ENST00000490980 ERVV-1B6SEH8 477 aa18.23■□□□□ 0.51
FRAT1-202ENST00000490980 SERPINB2P05120 415 aa18.23■□□□□ 0.51
FRAT1-202ENST00000490980 PROSER3Q2NL68 480 aa18.23■□□□□ 0.51
FRAT1-202ENST00000490980 C8orf58Q8NAV2 365 aa18.23■□□□□ 0.51
FRAT1-202ENST00000490980 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
FRAT1-202ENST00000490980 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
FRAT1-202ENST00000490980 PXDNLA1KZ92 1463 aa18.22■□□□□ 0.51
FRAT1-202ENST00000490980 ELL2O00472 640 aaPredicted RBP18.22■□□□□ 0.51
FRAT1-202ENST00000490980 ANXA1P04083 346 aa18.22■□□□□ 0.51
FRAT1-202ENST00000490980 TTLL7Q6ZT98 887 aa18.22■□□□□ 0.51
FRAT1-202ENST00000490980 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
FRAT1-202ENST00000490980 CHPF2Q9P2E5 772 aa18.22■□□□□ 0.51
FRAT1-202ENST00000490980 DBF4Q9UBU7 674 aaPredicted RBP18.22■□□□□ 0.51
FRAT1-202ENST00000490980 CACNA1FO60840 1977 aa18.21■□□□□ 0.51
FRAT1-202ENST00000490980 SETDB2Q96T68 719 aa18.21■□□□□ 0.51
FRAT1-202ENST00000490980 ARFGEF2Q9Y6D5 1785 aa18.21■□□□□ 0.51
FRAT1-202ENST00000490980 TGFB2P61812 414 aa18.2■□□□□ 0.5
FRAT1-202ENST00000490980 HLFQ16534 295 aa18.2■□□□□ 0.5
FRAT1-202ENST00000490980 ZBTB3Q9H5J0 574 aa18.2■□□□□ 0.5
FRAT1-202ENST00000490980 MYH16Q9H6N6 1097 aa18.2■□□□□ 0.5
FRAT1-202ENST00000490980 ATP10DQ9P241 1426 aa18.2■□□□□ 0.5
FRAT1-202ENST00000490980 GOLGA2Q08379 1002 aa18.19■□□□□ 0.5
FRAT1-202ENST00000490980 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
FRAT1-202ENST00000490980 SRCAPQ6ZRS2 3230 aa18.19■□□□□ 0.5
FRAT1-202ENST00000490980 TSPYL6Q8N831 410 aa18.19■□□□□ 0.5
FRAT1-202ENST00000490980 HYPKQ9NX55 129 aa18.19■□□□□ 0.5
FRAT1-202ENST00000490980 CCDC30Q5VVM6 783 aa18.18■□□□□ 0.5
FRAT1-202ENST00000490980 GIGYF2Q6Y7W6 1299 aaKnown RBP18.18■□□□□ 0.5
FRAT1-202ENST00000490980 COPS6Q7L5N1 327 aa18.18■□□□□ 0.5
FRAT1-202ENST00000490980 XAGE3Q8WTP9 111 aa18.18■□□□□ 0.5
FRAT1-202ENST00000490980 SPINK5Q9NQ38 1064 aaPredicted RBP18.18■□□□□ 0.5
FRAT1-202ENST00000490980 NIP7Q9Y221 180 aaKnown RBP eCLIP18.18■□□□□ 0.5
FRAT1-202ENST00000490980 ARFGEF1Q9Y6D6 1849 aa18.17■□□□□ 0.5
FRAT1-202ENST00000490980 AIMP1Q12904 312 aaKnown RBP18.17■□□□□ 0.5
FRAT1-202ENST00000490980 COL11A2P13942 1736 aaPredicted RBP18.17■□□□□ 0.5
FRAT1-202ENST00000490980 CHD4Q14839 1912 aa18.16■□□□□ 0.5
FRAT1-202ENST00000490980 GPR162Q16538 588 aa18.16■□□□□ 0.5
FRAT1-202ENST00000490980 PRR5LQ6MZQ0 368 aa18.16■□□□□ 0.5
FRAT1-202ENST00000490980 CNBD1Q8NA66 436 aa18.16■□□□□ 0.5
FRAT1-202ENST00000490980 A0A0G2JLW4 131 aa18.15■□□□□ 0.5
FRAT1-202ENST00000490980 DPEP1P16444 411 aa18.15■□□□□ 0.5
FRAT1-202ENST00000490980 EXOSC9Q06265 439 aaKnown RBP18.15■□□□□ 0.5
FRAT1-202ENST00000490980 NBPF5PQ86XG9 351 aaPredicted RBP18.15■□□□□ 0.5
FRAT1-202ENST00000490980 PELP1Q8IZL8 1130 aaKnown RBP18.15■□□□□ 0.5
FRAT1-202ENST00000490980 NPHP1O15259 732 aa18.14■□□□□ 0.49
FRAT1-202ENST00000490980 ST5P78524 1137 aa18.14■□□□□ 0.49
FRAT1-202ENST00000490980 ZNF34Q8IZ26 560 aa18.14■□□□□ 0.49
FRAT1-202ENST00000490980 IBTKQ9P2D0 1353 aaPredicted RBP18.14■□□□□ 0.49
FRAT1-202ENST00000490980 E9PSI1 815 aa18.13■□□□□ 0.49
FRAT1-202ENST00000490980 HSP90AB3PQ58FF7 597 aa18.13■□□□□ 0.49
FRAT1-202ENST00000490980 TPTE2Q6XPS3 522 aa18.13■□□□□ 0.49
FRAT1-202ENST00000490980 PLBD2Q8NHP8 589 aa18.13■□□□□ 0.49
FRAT1-202ENST00000490980 BRIP1Q9BX63 1249 aa18.13■□□□□ 0.49
FRAT1-202ENST00000490980 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
FRAT1-202ENST00000490980 CACNA1SQ13698 1873 aa18.13■□□□□ 0.49
FRAT1-202ENST00000490980 VAMP4O75379 141 aa18.12■□□□□ 0.49
FRAT1-202ENST00000490980 YBX3P16989 372 aaKnown RBP eCLIP18.12■□□□□ 0.49
FRAT1-202ENST00000490980 GPTP24298 496 aa18.12■□□□□ 0.49
FRAT1-202ENST00000490980 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
FRAT1-202ENST00000490980 NYXQ9GZU5 481 aa18.12■□□□□ 0.49
FRAT1-202ENST00000490980 PHAXQ9H814 394 aaKnown RBP18.12■□□□□ 0.49
FRAT1-202ENST00000490980 UBN2Q6ZU65 1347 aa18.12■□□□□ 0.49
FRAT1-202ENST00000490980 TNRC6CQ9HCJ0 1690 aaKnown RBP18.12■□□□□ 0.49
FRAT1-202ENST00000490980 FAM177BA6PVY3 158 aa18.11■□□□□ 0.49
FRAT1-202ENST00000490980 KCNA3P22001 575 aa18.11■□□□□ 0.49
FRAT1-202ENST00000490980 CHRNA5P30532 468 aa18.11■□□□□ 0.49
FRAT1-202ENST00000490980 PDE6BP35913 854 aa18.11■□□□□ 0.49
FRAT1-202ENST00000490980 PARP10Q53GL7 1025 aa18.11■□□□□ 0.49
FRAT1-202ENST00000490980 PDZRN3Q9UPQ7 1066 aa18.11■□□□□ 0.49
FRAT1-202ENST00000490980 TCERG1O14776 1098 aaKnown RBP18.1■□□□□ 0.49
FRAT1-202ENST00000490980 GRIN3BO60391 1043 aa18.1■□□□□ 0.49
FRAT1-202ENST00000490980 SLFN5Q08AF3 891 aa18.1■□□□□ 0.49
FRAT1-202ENST00000490980 TCIRG1Q13488 830 aa18.1■□□□□ 0.49
FRAT1-202ENST00000490980 C2CD5Q86YS7 1000 aa18.1■□□□□ 0.49
FRAT1-202ENST00000490980 CCDC24Q8N4L8 307 aa18.1■□□□□ 0.49
FRAT1-202ENST00000490980 PIM2Q9P1W9 311 aa18.1■□□□□ 0.49
FRAT1-202ENST00000490980 WWC3Q9ULE0 1092 aa18.1■□□□□ 0.49
FRAT1-202ENST00000490980 RIC1Q4ADV7 1423 aa18.09■□□□□ 0.49
FRAT1-202ENST00000490980 H0YIN7 160 aa18.09■□□□□ 0.49
FRAT1-202ENST00000490980 DDX58O95786 925 aaKnown RBP18.09■□□□□ 0.49
FRAT1-202ENST00000490980 GTF2E1P29083 439 aaPredicted RBP18.09■□□□□ 0.49
FRAT1-202ENST00000490980 SUSD4Q5VX71 490 aa18.09■□□□□ 0.49
FRAT1-202ENST00000490980 PPP1R42Q7Z4L9 355 aa18.09■□□□□ 0.49
FRAT1-202ENST00000490980 LAMB2P55268 1798 aa18.09■□□□□ 0.49
FRAT1-202ENST00000490980 SLC4A2P04920 1241 aa18.08■□□□□ 0.48
FRAT1-202ENST00000490980 RIC3Q7Z5B4 369 aa18.08■□□□□ 0.48
FRAT1-202ENST00000490980 BCS1LQ9Y276 419 aa18.08■□□□□ 0.48
FRAT1-202ENST00000490980 RNF123Q5XPI4 1314 aa18.07■□□□□ 0.48
FRAT1-202ENST00000490980 NTSR2O95665 410 aa18.07■□□□□ 0.48
FRAT1-202ENST00000490980 NLRP10Q86W26 655 aa18.07■□□□□ 0.48
FRAT1-202ENST00000490980 CDCA7LQ96GN5 454 aa18.07■□□□□ 0.48
FRAT1-202ENST00000490980 DDX60Q8IY21 1712 aaKnown RBP18.06■□□□□ 0.48
FRAT1-202ENST00000490980 ABCC12Q96J65 1359 aa18.06■□□□□ 0.48
FRAT1-202ENST00000490980 ERFEQ4G0M1 354 aa18.06■□□□□ 0.48
FRAT1-202ENST00000490980 DALRD3Q5D0E6 543 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms