RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 ARIH1Q9Y4X5 557 aaPredicted RBP12.6□□□□□ -0.39
SRRM1-217ENST00000490543 ITGB4P16144 1822 aa12.6□□□□□ -0.39
SRRM1-217ENST00000490543 LOC102724428A0A0B4J2F2 783 aa12.59□□□□□ -0.39
SRRM1-217ENST00000490543 HMGB2P26583 209 aaKnown RBP12.59□□□□□ -0.39
SRRM1-217ENST00000490543 SSFA2P28290 1259 aa12.59□□□□□ -0.39
SRRM1-217ENST00000490543 SIK1P57059 783 aa12.59□□□□□ -0.39
SRRM1-217ENST00000490543 ITPK1Q13572 414 aa12.59□□□□□ -0.39
SRRM1-217ENST00000490543 DNAJC5GQ8N7S2 189 aa12.59□□□□□ -0.39
SRRM1-217ENST00000490543 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
SRRM1-217ENST00000490543 SLC4A5Q9BY07 1137 aa12.59□□□□□ -0.39
SRRM1-217ENST00000490543 SMG6Q86US8 1419 aaKnown RBP12.59□□□□□ -0.39
SRRM1-217ENST00000490543 SPDYE16A6NNV3 312 aaPredicted RBP12.58□□□□□ -0.4
SRRM1-217ENST00000490543 EPAS1Q99814 870 aa12.58□□□□□ -0.4
SRRM1-217ENST00000490543 ASAP1Q9ULH1 1129 aa12.58□□□□□ -0.4
SRRM1-217ENST00000490543 EMILIN1Q9Y6C2 1016 aa12.58□□□□□ -0.4
SRRM1-217ENST00000490543 FLT4P35916 1363 aa12.57□□□□□ -0.4
SRRM1-217ENST00000490543 GNPATO15228 680 aa12.57□□□□□ -0.4
SRRM1-217ENST00000490543 MMP10P09238 476 aa12.57□□□□□ -0.4
SRRM1-217ENST00000490543 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
SRRM1-217ENST00000490543 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
SRRM1-217ENST00000490543 A0A0G2JLW4 131 aa12.56□□□□□ -0.4
SRRM1-217ENST00000490543 ATP6V1AP38606 617 aa12.56□□□□□ -0.4
SRRM1-217ENST00000490543 APLP1P51693 650 aa12.56□□□□□ -0.4
SRRM1-217ENST00000490543 NMRK2Q9NPI5 230 aa12.56□□□□□ -0.4
SRRM1-217ENST00000490543 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
SRRM1-217ENST00000490543 TOMM70O94826 608 aa12.55□□□□□ -0.4
SRRM1-217ENST00000490543 PLCB2Q00722 1185 aa12.55□□□□□ -0.4
SRRM1-217ENST00000490543 CARD14Q9BXL6 1004 aa12.55□□□□□ -0.4
SRRM1-217ENST00000490543 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
SRRM1-217ENST00000490543 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
SRRM1-217ENST00000490543 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
SRRM1-217ENST00000490543 PPP1R3GB7ZBB8 358 aa12.54□□□□□ -0.4
SRRM1-217ENST00000490543 PPM1GO15355 546 aaPredicted RBP12.54□□□□□ -0.4
SRRM1-217ENST00000490543 COL9A1P20849 921 aa12.54□□□□□ -0.4
SRRM1-217ENST00000490543 ARHGAP27Q6ZUM4 889 aa12.54□□□□□ -0.4
SRRM1-217ENST00000490543 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
SRRM1-217ENST00000490543 SPG7Q9UQ90 795 aa12.54□□□□□ -0.4
SRRM1-217ENST00000490543 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
SRRM1-217ENST00000490543 CICQ96RK0 1608 aaPredicted RBP12.53□□□□□ -0.4
SRRM1-217ENST00000490543 DPEP1P16444 411 aa12.53□□□□□ -0.4
SRRM1-217ENST00000490543 TGFB2P61812 414 aa12.53□□□□□ -0.4
SRRM1-217ENST00000490543 HTRA3P83110 453 aa12.53□□□□□ -0.4
SRRM1-217ENST00000490543 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
SRRM1-217ENST00000490543 EYA1Q99502 592 aa12.53□□□□□ -0.4
SRRM1-217ENST00000490543 KIF24Q5T7B8 1368 aa12.53□□□□□ -0.4
SRRM1-217ENST00000490543 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
SRRM1-217ENST00000490543 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
SRRM1-217ENST00000490543 KIAA1551Q9HCM1 1747 aa12.52□□□□□ -0.41
SRRM1-217ENST00000490543 SLC24A1O60721 1099 aa12.52□□□□□ -0.41
SRRM1-217ENST00000490543 TMF1P82094 1093 aa12.52□□□□□ -0.41
SRRM1-217ENST00000490543 NBR1Q14596 966 aa12.52□□□□□ -0.41
SRRM1-217ENST00000490543 C6orf132Q5T0Z8 1188 aa12.52□□□□□ -0.41
SRRM1-217ENST00000490543 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
SRRM1-217ENST00000490543 BHMG1C9JSJ3 638 aaPredicted RBP12.51□□□□□ -0.41
SRRM1-217ENST00000490543 PHKG2P15735 406 aa12.51□□□□□ -0.41
SRRM1-217ENST00000490543 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
SRRM1-217ENST00000490543 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
SRRM1-217ENST00000490543 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
SRRM1-217ENST00000490543 FCHSD2O94868 740 aa12.5□□□□□ -0.41
SRRM1-217ENST00000490543 KCNA3P22001 575 aa12.5□□□□□ -0.41
SRRM1-217ENST00000490543 IFNL2Q8IZJ0 200 aa12.5□□□□□ -0.41
SRRM1-217ENST00000490543 RTCBQ9Y3I0 505 aaKnown RBP12.5□□□□□ -0.41
SRRM1-217ENST00000490543 WASHC2AQ641Q2 1341 aa12.5□□□□□ -0.41
SRRM1-217ENST00000490543 KIF20BQ96Q89 1820 aa12.49□□□□□ -0.41
SRRM1-217ENST00000490543 C10orf71Q711Q0 1435 aa12.49□□□□□ -0.41
SRRM1-217ENST00000490543 GYS1P13807 737 aa12.49□□□□□ -0.41
SRRM1-217ENST00000490543 PROX2Q3B8N5 592 aa12.49□□□□□ -0.41
SRRM1-217ENST00000490543 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
SRRM1-217ENST00000490543 C9orf131Q5VYM1 1079 aa12.49□□□□□ -0.41
SRRM1-217ENST00000490543 KDRP35968 1356 aa12.48□□□□□ -0.41
SRRM1-217ENST00000490543 RBM46Q8TBY0 533 aaKnown RBP12.48□□□□□ -0.41
SRRM1-217ENST00000490543 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
SRRM1-217ENST00000490543 GRXCR2A6NFK2 248 aa12.47□□□□□ -0.41
SRRM1-217ENST00000490543 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
SRRM1-217ENST00000490543 KCTD12Q96CX2 325 aaKnown RBP12.47□□□□□ -0.41
SRRM1-217ENST00000490543 KLRG1Q96E93 195 aa12.47□□□□□ -0.41
SRRM1-217ENST00000490543 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
SRRM1-217ENST00000490543 PARP3Q9Y6F1 533 aa12.47□□□□□ -0.41
SRRM1-217ENST00000490543 MAP3K7O43318 606 aa12.46□□□□□ -0.41
SRRM1-217ENST00000490543 RPS6KA4O75676 772 aa12.46□□□□□ -0.41
SRRM1-217ENST00000490543 RFC4P35249 363 aa12.46□□□□□ -0.41
SRRM1-217ENST00000490543 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.41
SRRM1-217ENST00000490543 KCNV2Q8TDN2 545 aa12.46□□□□□ -0.41
SRRM1-217ENST00000490543 WDR90Q96KV7 1748 aa12.45□□□□□ -0.42
SRRM1-217ENST00000490543 MYH14Q7Z406 1995 aaKnown RBP12.45□□□□□ -0.42
SRRM1-217ENST00000490543 ERVV-2B6SEH9 535 aa12.45□□□□□ -0.42
SRRM1-217ENST00000490543 TSR1Q2NL82 804 aaKnown RBP12.45□□□□□ -0.42
SRRM1-217ENST00000490543 C16orf71Q8IYS4 520 aaPredicted RBP12.45□□□□□ -0.42
SRRM1-217ENST00000490543 JMYQ8N9B5 988 aa12.45□□□□□ -0.42
SRRM1-217ENST00000490543 RRAGCQ9HB90 399 aa12.45□□□□□ -0.42
SRRM1-217ENST00000490543 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
SRRM1-217ENST00000490543 SRP68Q9UHB9 627 aaKnown RBP12.45□□□□□ -0.42
SRRM1-217ENST00000490543 C4AP0C0L4 1744 aa12.45□□□□□ -0.42
SRRM1-217ENST00000490543 BRCA1P38398 1863 aaKnown RBP12.44□□□□□ -0.42
SRRM1-217ENST00000490543 CNTNAP4Q9C0A0 1308 aa12.44□□□□□ -0.42
SRRM1-217ENST00000490543 KCPQ6ZWJ8 1503 aa12.44□□□□□ -0.42
SRRM1-217ENST00000490543 CHRNA5P30532 468 aa12.44□□□□□ -0.42
SRRM1-217ENST00000490543 TNNT2P45379 298 aaPredicted RBP12.44□□□□□ -0.42
SRRM1-217ENST00000490543 DDR1Q08345 913 aa12.44□□□□□ -0.42
SRRM1-217ENST00000490543 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms