RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 FOXR1Q6PIV2 292 aa8.4□□□□□ -1.06
PRPF4B-207ENST00000490399 POTEAQ6S8J7 498 aa8.4□□□□□ -1.06
PRPF4B-207ENST00000490399 F11P03951 625 aa8.39□□□□□ -1.07
PRPF4B-207ENST00000490399 HIRAP54198 1017 aaPredicted RBP8.39□□□□□ -1.07
PRPF4B-207ENST00000490399 ARSJQ5FYB0 599 aaPredicted RBP8.39□□□□□ -1.07
PRPF4B-207ENST00000490399 LYPD4Q6UWN0 246 aa8.39□□□□□ -1.07
PRPF4B-207ENST00000490399 SAP130Q9H0E3 1048 aa8.39□□□□□ -1.07
PRPF4B-207ENST00000490399 NUCKS1Q9H1E3 243 aaKnown RBP8.39□□□□□ -1.07
PRPF4B-207ENST00000490399 MBIPQ9NS73 344 aa8.39□□□□□ -1.07
PRPF4B-207ENST00000490399 BICDL1Q6ZP65 573 aa8.38□□□□□ -1.07
PRPF4B-207ENST00000490399 C7orf43Q8WVR3 580 aa8.38□□□□□ -1.07
PRPF4B-207ENST00000490399 QTRT2Q9H974 415 aaKnown RBP8.38□□□□□ -1.07
PRPF4B-207ENST00000490399 THBS1P07996 1170 aa8.37□□□□□ -1.07
PRPF4B-207ENST00000490399 TATP17735 454 aaPredicted RBP8.37□□□□□ -1.07
PRPF4B-207ENST00000490399 TRERF1Q96PN7 1200 aa8.37□□□□□ -1.07
PRPF4B-207ENST00000490399 ZDHHC3Q9NYG2 299 aa8.37□□□□□ -1.07
PRPF4B-207ENST00000490399 IGF1RP08069 1367 aa8.36□□□□□ -1.07
PRPF4B-207ENST00000490399 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
PRPF4B-207ENST00000490399 CELA2BP08218 269 aaPredicted RBP8.36□□□□□ -1.07
PRPF4B-207ENST00000490399 COX20Q5RI15 118 aa8.36□□□□□ -1.07
PRPF4B-207ENST00000490399 AEBP1Q8IUX7 1158 aa8.36□□□□□ -1.07
PRPF4B-207ENST00000490399 C1orf216Q8TAB5 229 aa8.36□□□□□ -1.07
PRPF4B-207ENST00000490399 RHPN1Q8TCX5 695 aa8.36□□□□□ -1.07
PRPF4B-207ENST00000490399 ZIC5Q96T25 663 aa8.36□□□□□ -1.07
PRPF4B-207ENST00000490399 KLK14Q9P0G3 267 aa8.36□□□□□ -1.07
PRPF4B-207ENST00000490399 LRFN2Q9ULH4 789 aa8.36□□□□□ -1.07
PRPF4B-207ENST00000490399 A0A1W2PNR3 127 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 BRD1O95696 1058 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 GSK3AP49840 483 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 MAP3K10Q02779 954 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 KCNMA1Q12791 1236 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 MTMR3Q13615 1198 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 C1orf53Q5VUE5 145 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 B4GALNT3Q6L9W6 998 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 LRRC69Q6ZNQ3 347 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 PGBD3Q8N328 593 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 ZNF280CQ8ND82 737 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 HSH2DQ96JZ2 352 aa8.35□□□□□ -1.07
PRPF4B-207ENST00000490399 MX2P20592 715 aa8.34□□□□□ -1.07
PRPF4B-207ENST00000490399 DGKZQ13574 1117 aa8.34□□□□□ -1.07
PRPF4B-207ENST00000490399 RTN1Q16799 776 aa8.34□□□□□ -1.07
PRPF4B-207ENST00000490399 GTF3C2Q8WUA4 911 aaPredicted RBP8.34□□□□□ -1.07
PRPF4B-207ENST00000490399 ANO2Q9NQ90 1003 aa8.34□□□□□ -1.07
PRPF4B-207ENST00000490399 PTCD1O75127 700 aaKnown RBP8.33□□□□□ -1.08
PRPF4B-207ENST00000490399 ABL1P00519 1130 aa8.33□□□□□ -1.08
PRPF4B-207ENST00000490399 SERPINB4P48594 390 aa8.33□□□□□ -1.08
PRPF4B-207ENST00000490399 ZNF211Q13398 564 aaPredicted RBP8.33□□□□□ -1.08
PRPF4B-207ENST00000490399 FAM26DQ5JW98 314 aa8.33□□□□□ -1.08
PRPF4B-207ENST00000490399 C16orf46Q6P387 395 aa8.33□□□□□ -1.08
PRPF4B-207ENST00000490399 COL26A1Q96A83 441 aa8.33□□□□□ -1.08
PRPF4B-207ENST00000490399 CRISPLD1Q9H336 500 aa8.33□□□□□ -1.08
PRPF4B-207ENST00000490399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.33□□□□□ -1.082e-11■■■■■ 173.1
PRPF4B-207ENST00000490399 DNMT3AQ9Y6K1 912 aaPredicted RBP8.33□□□□□ -1.08
PRPF4B-207ENST00000490399 RNF225M0QZC1 329 aaPredicted RBP8.32□□□□□ -1.08
PRPF4B-207ENST00000490399 ARID4AP29374 1257 aaPredicted RBP8.32□□□□□ -1.08
PRPF4B-207ENST00000490399 MARSP56192 900 aaKnown RBP8.32□□□□□ -1.08
PRPF4B-207ENST00000490399 SUSD3Q96L08 255 aa8.32□□□□□ -1.08
PRPF4B-207ENST00000490399 BCS1LQ9Y276 419 aa8.32□□□□□ -1.08
PRPF4B-207ENST00000490399 GJA3Q9Y6H8 435 aa8.32□□□□□ -1.08
PRPF4B-207ENST00000490399 TNFRSF10BO14763 440 aa8.31□□□□□ -1.08
PRPF4B-207ENST00000490399 RASSF7Q02833 373 aa8.31□□□□□ -1.08
PRPF4B-207ENST00000490399 EFHC2Q5JST6 749 aa8.31□□□□□ -1.08
PRPF4B-207ENST00000490399 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
PRPF4B-207ENST00000490399 ACDQ96AP0 544 aa8.31□□□□□ -1.08
PRPF4B-207ENST00000490399 MYO19Q96H55 970 aa8.31□□□□□ -1.08
PRPF4B-207ENST00000490399 NEUROD4Q9HD90 331 aa8.31□□□□□ -1.08
PRPF4B-207ENST00000490399 IRS1P35568 1242 aa8.3□□□□□ -1.08
PRPF4B-207ENST00000490399 UBAP2LQ14157 1087 aaKnown RBP8.3□□□□□ -1.08
PRPF4B-207ENST00000490399 ZCCHC2Q9C0B9 1178 aaKnown RBP8.3□□□□□ -1.08
PRPF4B-207ENST00000490399 GDF11O95390 407 aa8.29□□□□□ -1.08
PRPF4B-207ENST00000490399 BCRP11274 1271 aa8.29□□□□□ -1.08
PRPF4B-207ENST00000490399 C11orf91Q3C1V1 193 aa8.29□□□□□ -1.08
PRPF4B-207ENST00000490399 TMEM151AQ8N4L1 468 aa8.29□□□□□ -1.08
PRPF4B-207ENST00000490399 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
PRPF4B-207ENST00000490399 IFT43Q96FT9 208 aa8.29□□□□□ -1.08
PRPF4B-207ENST00000490399 NSFL1CQ9UNZ2 370 aaKnown RBP8.29□□□□□ -1.08
PRPF4B-207ENST00000490399 IVNS1ABPQ9Y6Y0 642 aa8.29□□□□□ -1.08
PRPF4B-207ENST00000490399 DCDC2BA2VCK2 349 aa8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 ZBTB39O15060 712 aa8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 LBRQ14739 615 aaKnown RBP8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 NLRP8Q86W28 1048 aa8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 ETFBKMTQ8IXQ9 262 aa8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 HELQQ8TDG4 1101 aa8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 ABHD17AQ96GS6 310 aa8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 CFHR5Q9BXR6 569 aa8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 ENAMQ9NRM1 1142 aa8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 MTMR7Q9Y216 660 aa8.28□□□□□ -1.08
PRPF4B-207ENST00000490399 ATXN7O15265 892 aaPredicted RBP8.27□□□□□ -1.09
PRPF4B-207ENST00000490399 BNIP3LO60238 219 aa8.27□□□□□ -1.09
PRPF4B-207ENST00000490399 KCNA1Q09470 495 aa8.27□□□□□ -1.09
PRPF4B-207ENST00000490399 NEDD1Q8NHV4 660 aa8.27□□□□□ -1.09
PRPF4B-207ENST00000490399 STIM2Q9P246 746 aa8.27□□□□□ -1.09
PRPF4B-207ENST00000490399 ANKIB1Q9P2G1 1089 aa8.27□□□□□ -1.09
PRPF4B-207ENST00000490399 PHF24Q9UPV7 400 aa8.27□□□□□ -1.09
PRPF4B-207ENST00000490399 TGFBR3LH3BV60 316 aa8.26□□□□□ -1.09
PRPF4B-207ENST00000490399 MAP2K3P46734 347 aa8.26□□□□□ -1.09
PRPF4B-207ENST00000490399 BTLAQ7Z6A9 289 aa8.26□□□□□ -1.09
PRPF4B-207ENST00000490399 TREML1Q86YW5 311 aa8.26□□□□□ -1.09
PRPF4B-207ENST00000490399 SCARF2Q96GP6 870 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms