RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 DNMBPQ6XZF7 1577 aa5.38□□□□□ -1.55
CRNKL1-203ENST00000490258 PIK3CDO00329 1044 aa5.38□□□□□ -1.55
CRNKL1-203ENST00000490258 ABL2P42684 1182 aa5.38□□□□□ -1.55
CRNKL1-203ENST00000490258 TXNRD3Q86VQ6 643 aa5.38□□□□□ -1.55
CRNKL1-203ENST00000490258 CEP164Q9UPV0 1460 aa5.38□□□□□ -1.55
CRNKL1-203ENST00000490258 TOPBP1Q92547 1522 aa5.38□□□□□ -1.55
CRNKL1-203ENST00000490258 EIF4G3O43432 1585 aaKnown RBP5.38□□□□□ -1.55
CRNKL1-203ENST00000490258 CHD1O14646 1710 aa5.37□□□□□ -1.55
CRNKL1-203ENST00000490258 POM121CA8CG34 1229 aa5.37□□□□□ -1.55
CRNKL1-203ENST00000490258 IL2RAP01589 272 aa5.37□□□□□ -1.55
CRNKL1-203ENST00000490258 MSX1P28360 303 aa5.37□□□□□ -1.55
CRNKL1-203ENST00000490258 RNF20Q5VTR2 975 aa5.37□□□□□ -1.55
CRNKL1-203ENST00000490258 ZNF295-AS1Q8N0V1 137 aa5.37□□□□□ -1.55
CRNKL1-203ENST00000490258 UCN2Q96RP3 112 aa5.37□□□□□ -1.55
CRNKL1-203ENST00000490258 FHDC1Q9C0D6 1143 aaPredicted RBP5.37□□□□□ -1.55
CRNKL1-203ENST00000490258 PCDHB11Q9Y5F2 797 aa5.37□□□□□ -1.55
CRNKL1-203ENST00000490258 SOGA1O94964 1423 aa5.37□□□□□ -1.55
CRNKL1-203ENST00000490258 STAU1O95793 577 aaKnown RBP5.36□□□□□ -1.55
CRNKL1-203ENST00000490258 SCNN1DP51172 638 aa5.36□□□□□ -1.55
CRNKL1-203ENST00000490258 FAM182BQ5T319 152 aa5.36□□□□□ -1.55
CRNKL1-203ENST00000490258 FIGNL1Q6PIW4 674 aa5.36□□□□□ -1.55
CRNKL1-203ENST00000490258 ARXQ96QS3 562 aa5.36□□□□□ -1.55
CRNKL1-203ENST00000490258 WRNQ14191 1432 aaPredicted RBP eCLIP5.36□□□□□ -1.55
CRNKL1-203ENST00000490258 ERCC6Q03468 1493 aa5.36□□□□□ -1.55
CRNKL1-203ENST00000490258 TARBP1Q13395 1621 aaKnown RBP5.36□□□□□ -1.55
CRNKL1-203ENST00000490258 ABCA5Q8WWZ7 1642 aa5.35□□□□□ -1.55
CRNKL1-203ENST00000490258 PCBP4P57723 403 aaKnown RBP5.35□□□□□ -1.55
CRNKL1-203ENST00000490258 EIF4G2P78344 907 aaKnown RBP eCLIP5.35□□□□□ -1.55
CRNKL1-203ENST00000490258 COL9A3Q14050 684 aaPredicted RBP5.35□□□□□ -1.55
CRNKL1-203ENST00000490258 WASHC4Q2M389 1173 aa5.35□□□□□ -1.55
CRNKL1-203ENST00000490258 ZNF592Q92610 1267 aa5.35□□□□□ -1.55
CRNKL1-203ENST00000490258 PCDHGC4Q9Y5F7 938 aa5.35□□□□□ -1.55
CRNKL1-203ENST00000490258 OAS3Q9Y6K5 1087 aaKnown RBP5.35□□□□□ -1.55
CRNKL1-203ENST00000490258 CTTNBP2Q8WZ74 1663 aa5.34□□□□□ -1.55
CRNKL1-203ENST00000490258 ALAS2P22557 587 aa5.34□□□□□ -1.55
CRNKL1-203ENST00000490258 FLIIQ13045 1269 aa5.34□□□□□ -1.55
CRNKL1-203ENST00000490258 CYP2U1Q7Z449 544 aa5.34□□□□□ -1.55
CRNKL1-203ENST00000490258 ZCCHC2Q9C0B9 1178 aaKnown RBP5.34□□□□□ -1.55
CRNKL1-203ENST00000490258 CRISPLD1Q9H336 500 aa5.34□□□□□ -1.55
CRNKL1-203ENST00000490258 ETNK1Q9HBU6 452 aa5.34□□□□□ -1.55
CRNKL1-203ENST00000490258 ARHGEF10LQ9HCE6 1279 aa5.34□□□□□ -1.55
CRNKL1-203ENST00000490258 ZNF330Q9Y3S2 320 aaPredicted RBP5.34□□□□□ -1.55
CRNKL1-203ENST00000490258 WDR62O43379 1518 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 ZNF608Q9ULD9 1512 aaPredicted RBP5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 POLA1P09884 1462 aaPredicted RBP5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 CADPSQ9ULU8 1353 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 ELOA3CA0A087WX78 387 aaPredicted RBP5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 ELOA3DA6NLF2 546 aaPredicted RBP5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 SELPP16109 830 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 SSTR4P31391 388 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 SOX11P35716 441 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 NRG1Q02297 640 aaPredicted RBP5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 ELOA3BQ3SY89 546 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 ZNF468Q5VIY5 522 aaPredicted RBP5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 PLPP7Q8NBV4 271 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 ELOA3Q8NG57 546 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 CCER1Q8TC90 406 aaPredicted RBP5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 CLUAP1Q96AJ1 413 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 XAGE2Q96GT9 111 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 SSBP4Q9BWG4 385 aaPredicted RBP5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 PRDM6Q9NQX0 595 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 RAB6BQ9NRW1 208 aa5.33□□□□□ -1.56
CRNKL1-203ENST00000490258 MRC2Q9UBG0 1479 aa5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 GNRH1P01148 92 aa5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 CD33P20138 364 aa5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 CENPCQ03188 943 aa5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 GNASQ5JWF2 1037 aa5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 NFATC2IPQ8NCF5 419 aa5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 ESYT1Q9BSJ8 1104 aa5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 DNAAF2Q9NVR5 837 aaKnown RBP5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 HCN2Q9UL51 889 aa5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 DOLKQ9UPQ8 538 aa5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 PCDHGA11Q9Y5H2 935 aa5.32□□□□□ -1.56
CRNKL1-203ENST00000490258 TMEM229AB2RXF0 380 aa5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 M0R082 166 aa5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 DKK1O94907 266 aa5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 CD97P48960 835 aa5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 GP2P55259 537 aaKnown RBP5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 C4orf17Q53FE4 359 aa5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 ZNF417Q8TAU3 575 aa5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 LENG1Q96BZ8 264 aaPredicted RBP5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 ZNF587Q96SQ5 575 aaPredicted RBP5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 ZSCAN10Q96SZ4 725 aaPredicted RBP5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 PRM3Q9NNZ6 103 aa5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 PRR12Q9ULL5 1215 aa5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 CUX2O14529 1486 aa5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 LRRIQ1Q96JM4 1722 aa5.31□□□□□ -1.56
CRNKL1-203ENST00000490258 ADAMTS12P58397 1594 aa5.3□□□□□ -1.56
CRNKL1-203ENST00000490258 ATXN7O15265 892 aaPredicted RBP5.3□□□□□ -1.56
CRNKL1-203ENST00000490258 MAPTP10636 758 aaKnown RBP5.3□□□□□ -1.56
CRNKL1-203ENST00000490258 MAP7D1Q3KQU3 841 aa5.3□□□□□ -1.56
CRNKL1-203ENST00000490258 CNKSR1Q969H4 720 aa5.3□□□□□ -1.56
CRNKL1-203ENST00000490258 TIMELESSQ9UNS1 1208 aa5.3□□□□□ -1.56
CRNKL1-203ENST00000490258 IQSEC3Q9UPP2 1182 aaPredicted RBP5.3□□□□□ -1.56
CRNKL1-203ENST00000490258 USP3Q9Y6I4 520 aa5.3□□□□□ -1.56
CRNKL1-203ENST00000490258 LOC105371045A0A1W2PR82 267 aa5.29□□□□□ -1.56
CRNKL1-203ENST00000490258 DCDC2BA2VCK2 349 aa5.29□□□□□ -1.56
CRNKL1-203ENST00000490258 A6NJR5 290 aa5.29□□□□□ -1.56
CRNKL1-203ENST00000490258 NID1P14543 1247 aa5.29□□□□□ -1.56
CRNKL1-203ENST00000490258 UBTFP17480 764 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms