RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 CCDC24Q8N4L8 307 aa15.93■□□□□ 0.14
SMARCD3-213ENST00000489503 ZBTB3Q9H5J0 574 aa15.93■□□□□ 0.14
SMARCD3-213ENST00000489503 SPINK5Q9NQ38 1064 aaPredicted RBP15.93■□□□□ 0.14
SMARCD3-213ENST00000489503 NUP98P52948 1817 aa15.93■□□□□ 0.14
SMARCD3-213ENST00000489503 SERPINB2P05120 415 aa15.92■□□□□ 0.14
SMARCD3-213ENST00000489503 TSPYL6Q8N831 410 aa15.92■□□□□ 0.14
SMARCD3-213ENST00000489503 ANKRD31Q8N7Z5 1873 aa15.92■□□□□ 0.14
SMARCD3-213ENST00000489503 FANCIQ9NVI1 1328 aa15.92■□□□□ 0.14
SMARCD3-213ENST00000489503 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
SMARCD3-213ENST00000489503 IL16Q14005 1332 aa15.91■□□□□ 0.14
SMARCD3-213ENST00000489503 MAP3K15Q6ZN16 1313 aa15.91■□□□□ 0.14
SMARCD3-213ENST00000489503 COL11A2P13942 1736 aaPredicted RBP15.91■□□□□ 0.14
SMARCD3-213ENST00000489503 FAM177BA6PVY3 158 aa15.9■□□□□ 0.14
SMARCD3-213ENST00000489503 HOXB7P09629 217 aa15.9■□□□□ 0.14
SMARCD3-213ENST00000489503 YBX3P16989 372 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMARCD3-213ENST00000489503 AIMP1Q12904 312 aaKnown RBP15.9■□□□□ 0.14
SMARCD3-213ENST00000489503 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
SMARCD3-213ENST00000489503 XAGE3Q8WTP9 111 aa15.9■□□□□ 0.14
SMARCD3-213ENST00000489503 BRCA1P38398 1863 aaKnown RBP15.9■□□□□ 0.14
SMARCD3-213ENST00000489503 A0A0G2JLW4 131 aa15.89■□□□□ 0.13
SMARCD3-213ENST00000489503 TCERG1O14776 1098 aaKnown RBP15.89■□□□□ 0.13
SMARCD3-213ENST00000489503 DPEP1P16444 411 aa15.89■□□□□ 0.13
SMARCD3-213ENST00000489503 CHRNA5P30532 468 aa15.89■□□□□ 0.13
SMARCD3-213ENST00000489503 GPR162Q16538 588 aa15.89■□□□□ 0.13
SMARCD3-213ENST00000489503 WDR63Q8IWG1 891 aa15.89■□□□□ 0.13
SMARCD3-213ENST00000489503 DDX21Q9NR30 783 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMARCD3-213ENST00000489503 NIP7Q9Y221 180 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMARCD3-213ENST00000489503 ZNF652Q9Y2D9 606 aa15.89■□□□□ 0.13
SMARCD3-213ENST00000489503 ANKRD36CQ5JPF3 1778 aa15.89■□□□□ 0.13
SMARCD3-213ENST00000489503 GPTP24298 496 aa15.88■□□□□ 0.13
SMARCD3-213ENST00000489503 PRR5LQ6MZQ0 368 aa15.88■□□□□ 0.13
SMARCD3-213ENST00000489503 COPS6Q7L5N1 327 aa15.88■□□□□ 0.13
SMARCD3-213ENST00000489503 SETDB2Q96T68 719 aa15.88■□□□□ 0.13
SMARCD3-213ENST00000489503 ZNF521Q96K83 1311 aa15.88■□□□□ 0.13
SMARCD3-213ENST00000489503 ATP10DQ9P241 1426 aa15.87■□□□□ 0.13
SMARCD3-213ENST00000489503 TNRC6CQ9HCJ0 1690 aaKnown RBP15.87■□□□□ 0.13
SMARCD3-213ENST00000489503 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
SMARCD3-213ENST00000489503 ARFGEF2Q9Y6D5 1785 aa15.87■□□□□ 0.13
SMARCD3-213ENST00000489503 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
SMARCD3-213ENST00000489503 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-213ENST00000489503 TWISTNBQ3B726 338 aaPredicted RBP15.86■□□□□ 0.13
SMARCD3-213ENST00000489503 CLEC4GQ6UXB4 293 aa15.86■□□□□ 0.13
SMARCD3-213ENST00000489503 CNBD1Q8NA66 436 aa15.86■□□□□ 0.13
SMARCD3-213ENST00000489503 ZNF428Q96B54 188 aa15.86■□□□□ 0.13
SMARCD3-213ENST00000489503 UBN2Q6ZU65 1347 aa15.86■□□□□ 0.13
SMARCD3-213ENST00000489503 ERVV-1B6SEH8 477 aa15.85■□□□□ 0.13
SMARCD3-213ENST00000489503 NPHP1O15259 732 aa15.85■□□□□ 0.13
SMARCD3-213ENST00000489503 NBPF5PQ86XG9 351 aaPredicted RBP15.85■□□□□ 0.13
SMARCD3-213ENST00000489503 DBF4Q9UBU7 674 aaPredicted RBP15.85■□□□□ 0.13
SMARCD3-213ENST00000489503 ABCC12Q96J65 1359 aa15.85■□□□□ 0.13
SMARCD3-213ENST00000489503 KCNA3P22001 575 aa15.84■□□□□ 0.13
SMARCD3-213ENST00000489503 TGFB2P61812 414 aa15.84■□□□□ 0.13
SMARCD3-213ENST00000489503 GIGYF2Q6Y7W6 1299 aaKnown RBP15.84■□□□□ 0.13
SMARCD3-213ENST00000489503 PHAXQ9H814 394 aaKnown RBP15.84■□□□□ 0.13
SMARCD3-213ENST00000489503 CACNA1SQ13698 1873 aa15.84■□□□□ 0.13
SMARCD3-213ENST00000489503 BCS1LQ9Y276 419 aa15.83■□□□□ 0.12
SMARCD3-213ENST00000489503 RGL2O15211 777 aa15.82■□□□□ 0.12
SMARCD3-213ENST00000489503 ST5P78524 1137 aa15.82■□□□□ 0.12
SMARCD3-213ENST00000489503 GOLGA2Q08379 1002 aa15.82■□□□□ 0.12
SMARCD3-213ENST00000489503 CCDC30Q5VVM6 783 aa15.82■□□□□ 0.12
SMARCD3-213ENST00000489503 NUTM1Q86Y26 1132 aa15.82■□□□□ 0.12
SMARCD3-213ENST00000489503 C2CD5Q86YS7 1000 aa15.82■□□□□ 0.12
SMARCD3-213ENST00000489503 ZNF34Q8IZ26 560 aa15.82■□□□□ 0.12
SMARCD3-213ENST00000489503 MYH16Q9H6N6 1097 aa15.82■□□□□ 0.12
SMARCD3-213ENST00000489503 HYPKQ9NX55 129 aa15.82■□□□□ 0.12
SMARCD3-213ENST00000489503 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
SMARCD3-213ENST00000489503 CDCA7LQ96GN5 454 aa15.81■□□□□ 0.12
SMARCD3-213ENST00000489503 ARFGEF1Q9Y6D6 1849 aa15.81■□□□□ 0.12
SMARCD3-213ENST00000489503 CHD4Q14839 1912 aa15.8■□□□□ 0.12
SMARCD3-213ENST00000489503 ERFEQ4G0M1 354 aa15.8■□□□□ 0.12
SMARCD3-213ENST00000489503 G2E3Q7L622 706 aa15.8■□□□□ 0.12
SMARCD3-213ENST00000489503 BRIP1Q9BX63 1249 aa15.8■□□□□ 0.12
SMARCD3-213ENST00000489503 GOLGB1Q14789 3259 aaKnown RBP15.79■□□□□ 0.12
SMARCD3-213ENST00000489503 VAMP4O75379 141 aa15.79■□□□□ 0.12
SMARCD3-213ENST00000489503 NTSR2O95665 410 aa15.79■□□□□ 0.12
SMARCD3-213ENST00000489503 ANKRD13DQ6ZTN6 518 aa15.79■□□□□ 0.12
SMARCD3-213ENST00000489503 PLBD2Q8NHP8 589 aa15.79■□□□□ 0.12
SMARCD3-213ENST00000489503 STK31Q9BXU1 1019 aa15.79■□□□□ 0.12
SMARCD3-213ENST00000489503 PIM2Q9P1W9 311 aa15.79■□□□□ 0.12
SMARCD3-213ENST00000489503 IBTKQ9P2D0 1353 aaPredicted RBP15.78■□□□□ 0.12
SMARCD3-213ENST00000489503 ATP5J2-PTCD1G3V325 749 aa15.78■□□□□ 0.12
SMARCD3-213ENST00000489503 H0YIN7 160 aa15.78■□□□□ 0.12
SMARCD3-213ENST00000489503 GTF2E1P29083 439 aaPredicted RBP15.78■□□□□ 0.12
SMARCD3-213ENST00000489503 TPTE2Q6XPS3 522 aa15.78■□□□□ 0.12
SMARCD3-213ENST00000489503 LAMB2P55268 1798 aa15.77■□□□□ 0.12
SMARCD3-213ENST00000489503 E9PSI1 815 aa15.77■□□□□ 0.12
SMARCD3-213ENST00000489503 PDE6BP35913 854 aa15.77■□□□□ 0.12
SMARCD3-213ENST00000489503 SLFN5Q08AF3 891 aa15.77■□□□□ 0.12
SMARCD3-213ENST00000489503 TCIRG1Q13488 830 aa15.77■□□□□ 0.12
SMARCD3-213ENST00000489503 HSP90AB3PQ58FF7 597 aa15.77■□□□□ 0.12
SMARCD3-213ENST00000489503 DALRD3Q5D0E6 543 aaKnown RBP15.77■□□□□ 0.12
SMARCD3-213ENST00000489503 RIC3Q7Z5B4 369 aa15.77■□□□□ 0.12
SMARCD3-213ENST00000489503 NLRP10Q86W26 655 aa15.77■□□□□ 0.12
SMARCD3-213ENST00000489503 ZNF622Q969S3 477 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMARCD3-213ENST00000489503 ADCY9O60503 1353 aa15.76■□□□□ 0.11
SMARCD3-213ENST00000489503 GRIN3BO60391 1043 aa15.76■□□□□ 0.11
SMARCD3-213ENST00000489503 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
SMARCD3-213ENST00000489503 PARP10Q53GL7 1025 aa15.76■□□□□ 0.11
SMARCD3-213ENST00000489503 C3orf67Q6ZVT6 689 aa15.76■□□□□ 0.11
SMARCD3-213ENST00000489503 SYNE4Q8N205 404 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms