RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 APAF1O14727 1248 aa32.72■■■□□ 2.83
HMGN1-217ENST00000489072 MYL6BP14649 208 aa32.72■■■□□ 2.83
HMGN1-217ENST00000489072 CNBD1Q8NA66 436 aa32.72■■■□□ 2.83
HMGN1-217ENST00000489072 TTLL7Q6ZT98 887 aa32.71■■■□□ 2.83
HMGN1-217ENST00000489072 BRIP1Q9BX63 1249 aa32.71■■■□□ 2.83
HMGN1-217ENST00000489072 LAS1LQ9Y4W2 734 aaKnown RBP32.71■■■□□ 2.83
HMGN1-217ENST00000489072 ERBB4Q15303 1308 aa32.7■■■□□ 2.82
HMGN1-217ENST00000489072 H0YIN7 160 aa32.69■■■□□ 2.82
HMGN1-217ENST00000489072 EIF2S2P20042 333 aaKnown RBP32.69■■■□□ 2.82
HMGN1-217ENST00000489072 PDIA6Q15084 440 aa32.68■■■□□ 2.82
HMGN1-217ENST00000489072 KRT24Q2M2I5 525 aa32.68■■■□□ 2.82
HMGN1-217ENST00000489072 NIP7Q9Y221 180 aaKnown RBP eCLIP32.68■■■□□ 2.82
HMGN1-217ENST00000489072 PDE6BP35913 854 aa32.67■■■□□ 2.82
HMGN1-217ENST00000489072 LRP10Q7Z4F1 713 aa32.67■■■□□ 2.82
HMGN1-217ENST00000489072 NBPF5PQ86XG9 351 aaPredicted RBP32.67■■■□□ 2.82
HMGN1-217ENST00000489072 MAP3K15Q6ZN16 1313 aa32.67■■■□□ 2.82
HMGN1-217ENST00000489072 ERVV-1B6SEH8 477 aa32.66■■■□□ 2.82
HMGN1-217ENST00000489072 NPHP1O15259 732 aa32.66■■■□□ 2.82
HMGN1-217ENST00000489072 TTLL6Q8N841 843 aa32.66■■■□□ 2.82
HMGN1-217ENST00000489072 ST5P78524 1137 aa32.65■■■□□ 2.82
HMGN1-217ENST00000489072 PROSER3Q2NL68 480 aa32.65■■■□□ 2.82
HMGN1-217ENST00000489072 ANP32CO43423 234 aa32.64■■■□□ 2.82
HMGN1-217ENST00000489072 SBF1O95248 1867 aa32.64■■■□□ 2.82
HMGN1-217ENST00000489072 KIF6Q6ZMV9 814 aa32.64■■■□□ 2.82
HMGN1-217ENST00000489072 ANXA1P04083 346 aa32.63■■■□□ 2.81
HMGN1-217ENST00000489072 NECTIN2Q92692 538 aa32.63■■■□□ 2.81
HMGN1-217ENST00000489072 CFAP44Q96MT7 982 aa32.63■■■□□ 2.81
HMGN1-217ENST00000489072 ZBTB3Q9H5J0 574 aa32.63■■■□□ 2.81
HMGN1-217ENST00000489072 PDZRN3Q9UPQ7 1066 aa32.63■■■□□ 2.81
HMGN1-217ENST00000489072 FAM177BA6PVY3 158 aa32.61■■■□□ 2.81
HMGN1-217ENST00000489072 ZNF526Q8TF50 670 aaPredicted RBP32.61■■■□□ 2.81
HMGN1-217ENST00000489072 ZNF622Q969S3 477 aaKnown RBP eCLIP32.61■■■□□ 2.81
HMGN1-217ENST00000489072 ZNF853P0CG23 659 aa32.6■■■□□ 2.81
HMGN1-217ENST00000489072 CACNA1SQ13698 1873 aa32.6■■■□□ 2.81
HMGN1-217ENST00000489072 C9orf131Q5VYM1 1079 aa32.59■■■□□ 2.81
HMGN1-217ENST00000489072 TPTE2Q6XPS3 522 aa32.59■■■□□ 2.81
HMGN1-217ENST00000489072 MRS2Q9HD23 443 aa32.59■■■□□ 2.81
HMGN1-217ENST00000489072 MBIPQ9NS73 344 aa32.59■■■□□ 2.81
HMGN1-217ENST00000489072 SRGNP10124 158 aa32.58■■■□□ 2.81
HMGN1-217ENST00000489072 GPBP1L1Q9HC44 474 aaPredicted RBP32.58■■■□□ 2.81
HMGN1-217ENST00000489072 SLX4Q8IY92 1834 aa32.57■■■□□ 2.8
HMGN1-217ENST00000489072 UBN2Q6ZU65 1347 aa32.56■■■□□ 2.8
HMGN1-217ENST00000489072 ARFGEF2Q9Y6D5 1785 aa32.56■■■□□ 2.8
HMGN1-217ENST00000489072 RASSF7Q02833 373 aa32.56■■■□□ 2.8
HMGN1-217ENST00000489072 GIGYF2Q6Y7W6 1299 aaKnown RBP32.56■■■□□ 2.8
HMGN1-217ENST00000489072 GPTP24298 496 aa32.55■■■□□ 2.8
HMGN1-217ENST00000489072 STYK1Q6J9G0 422 aa32.55■■■□□ 2.8
HMGN1-217ENST00000489072 IFT57Q9NWB7 429 aa32.55■■■□□ 2.8
HMGN1-217ENST00000489072 TNRC6CQ9HCJ0 1690 aaKnown RBP32.55■■■□□ 2.8
HMGN1-217ENST00000489072 SENP3-EIF4A1A0A087X0R7 540 aa32.54■■■□□ 2.8
HMGN1-217ENST00000489072 KLRG2A4D1S0 409 aaPredicted RBP32.54■■■□□ 2.8
HMGN1-217ENST00000489072 HOXB7P09629 217 aa32.54■■■□□ 2.8
HMGN1-217ENST00000489072 ZNF34Q8IZ26 560 aa32.54■■■□□ 2.8
HMGN1-217ENST00000489072 DDX21Q9NR30 783 aaKnown RBP eCLIP32.54■■■□□ 2.8
HMGN1-217ENST00000489072 C1QTNF8P60827 252 aa32.53■■■□□ 2.8
HMGN1-217ENST00000489072 MASTLQ96GX5 879 aa32.53■■■□□ 2.8
HMGN1-217ENST00000489072 RNF181Q9P0P0 153 aa32.53■■■□□ 2.8
HMGN1-217ENST00000489072 ABCC12Q96J65 1359 aa32.53■■■□□ 2.8
HMGN1-217ENST00000489072 CCDC88AQ3V6T2 1871 aa32.52■■■□□ 2.8
HMGN1-217ENST00000489072 GNAI1P63096 354 aa32.52■■■□□ 2.8
HMGN1-217ENST00000489072 CALD1Q05682 793 aaKnown RBP32.52■■■□□ 2.8
HMGN1-217ENST00000489072 HDGFL1Q5TGJ6 251 aa32.52■■■□□ 2.8
HMGN1-217ENST00000489072 DUSP27Q5VZP5 1158 aa32.52■■■□□ 2.8
HMGN1-217ENST00000489072 COPS6Q7L5N1 327 aa32.52■■■□□ 2.8
HMGN1-217ENST00000489072 XAGE3Q8WTP9 111 aa32.52■■■□□ 2.8
HMGN1-217ENST00000489072 CHPF2Q9P2E5 772 aa32.52■■■□□ 2.8
HMGN1-217ENST00000489072 ZNF219Q9P2Y4 722 aaPredicted RBP32.52■■■□□ 2.8
HMGN1-217ENST00000489072 FER1L6Q2WGJ9 1857 aa32.51■■■□□ 2.79
HMGN1-217ENST00000489072 C21orf2O43822 256 aa32.51■■■□□ 2.79
HMGN1-217ENST00000489072 PRELPP51888 382 aa32.51■■■□□ 2.79
HMGN1-217ENST00000489072 AIMP1Q12904 312 aaKnown RBP32.51■■■□□ 2.79
HMGN1-217ENST00000489072 SUSD4Q5VX71 490 aa32.51■■■□□ 2.79
HMGN1-217ENST00000489072 NUTM1Q86Y26 1132 aa32.51■■■□□ 2.79
HMGN1-217ENST00000489072 CNKSR1Q969H4 720 aa32.51■■■□□ 2.79
HMGN1-217ENST00000489072 NYXQ9GZU5 481 aa32.51■■■□□ 2.79
HMGN1-217ENST00000489072 ANKRD36CQ5JPF3 1778 aa32.5■■■□□ 2.79
HMGN1-217ENST00000489072 IBTKQ9P2D0 1353 aaPredicted RBP32.5■■■□□ 2.79
HMGN1-217ENST00000489072 NFKBIEO00221 500 aa32.5■■■□□ 2.79
HMGN1-217ENST00000489072 GTF2E1P29083 439 aaPredicted RBP32.5■■■□□ 2.79
HMGN1-217ENST00000489072 PRPF40BQ6NWY9 871 aaKnown RBP32.5■■■□□ 2.79
HMGN1-217ENST00000489072 ERFEQ4G0M1 354 aa32.49■■■□□ 2.79
HMGN1-217ENST00000489072 NPR1P16066 1061 aa32.48■■■□□ 2.79
HMGN1-217ENST00000489072 NTSR2O95665 410 aa32.47■■■□□ 2.79
HMGN1-217ENST00000489072 LMNB1P20700 586 aa32.45■■■□□ 2.79
HMGN1-217ENST00000489072 CCDC27Q2M243 656 aa32.45■■■□□ 2.79
HMGN1-217ENST00000489072 DBF4Q9UBU7 674 aaPredicted RBP32.45■■■□□ 2.79
HMGN1-217ENST00000489072 PARP10Q53GL7 1025 aa32.44■■■□□ 2.78
HMGN1-217ENST00000489072 RIC1Q4ADV7 1423 aa32.43■■■□□ 2.78
HMGN1-217ENST00000489072 ELL2O00472 640 aaPredicted RBP32.43■■■□□ 2.78
HMGN1-217ENST00000489072 KIF3CO14782 793 aa32.43■■■□□ 2.78
HMGN1-217ENST00000489072 WWC1Q8IX03 1113 aa32.43■■■□□ 2.78
HMGN1-217ENST00000489072 C8orf58Q8NAV2 365 aa32.43■■■□□ 2.78
HMGN1-217ENST00000489072 C7orf43Q8WVR3 580 aa32.43■■■□□ 2.78
HMGN1-217ENST00000489072 TIAM2Q8IVF5 1701 aa32.43■■■□□ 2.78
HMGN1-217ENST00000489072 CRY2Q49AN0 593 aa32.42■■■□□ 2.78
HMGN1-217ENST00000489072 PPP1R42Q7Z4L9 355 aa32.41■■■□□ 2.78
HMGN1-217ENST00000489072 DICER1Q9UPY3 1922 aaKnown RBP32.4■■■□□ 2.78
HMGN1-217ENST00000489072 NMRK2Q9NPI5 230 aa32.4■■■□□ 2.78
HMGN1-217ENST00000489072 TCIRG1Q13488 830 aa32.39■■■□□ 2.78
HMGN1-217ENST00000489072 HSP90AB3PQ58FF7 597 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms