RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 SNRKQ9NRH2 765 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 PCDHB9Q9Y5E1 797 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 NEXMIFQ5QGS0 1516 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 PPLO60437 1756 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 RPGRIP1LQ68CZ1 1315 aa7.51□□□□□ -1.21
SF3A3-207ENST00000488934 TOM1O60784 492 aa7.5□□□□□ -1.21
SF3A3-207ENST00000488934 INTS6LQ5JSJ4 861 aaKnown RBP7.5□□□□□ -1.21
SF3A3-207ENST00000488934 PPP1R26Q5T8A7 1209 aaPredicted RBP7.5□□□□□ -1.21
SF3A3-207ENST00000488934 TRIM46Q7Z4K8 759 aa7.5□□□□□ -1.21
SF3A3-207ENST00000488934 ZFAND3Q9H8U3 227 aa7.5□□□□□ -1.21
SF3A3-207ENST00000488934 LRRC7Q96NW7 1537 aa7.5□□□□□ -1.21
SF3A3-207ENST00000488934 FBXO45P0C2W1 286 aa7.49□□□□□ -1.21
SF3A3-207ENST00000488934 KCNA6P17658 529 aa7.49□□□□□ -1.21
SF3A3-207ENST00000488934 RNF20Q5VTR2 975 aa7.49□□□□□ -1.21
SF3A3-207ENST00000488934 ILDR2Q71H61 639 aa7.49□□□□□ -1.21
SF3A3-207ENST00000488934 MEIOBQ8N635 442 aa7.49□□□□□ -1.21
SF3A3-207ENST00000488934 TSEN34Q9BSV6 310 aaKnown RBP7.49□□□□□ -1.21
SF3A3-207ENST00000488934 TBX22Q9Y458 520 aa7.49□□□□□ -1.21
SF3A3-207ENST00000488934 IFT172Q9UG01 1749 aa7.49□□□□□ -1.21
SF3A3-207ENST00000488934 XIRP1Q702N8 1843 aaKnown RBP7.48□□□□□ -1.21
SF3A3-207ENST00000488934 BMP2P12643 396 aa7.48□□□□□ -1.21
SF3A3-207ENST00000488934 LINC00528Q8N1L1 170 aa7.48□□□□□ -1.21
SF3A3-207ENST00000488934 ZNF775Q96BV0 537 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-207ENST00000488934 ZFP42Q96MM3 310 aa7.48□□□□□ -1.21
SF3A3-207ENST00000488934 PURBQ96QR8 312 aaKnown RBP7.48□□□□□ -1.21
SF3A3-207ENST00000488934 SLC26A8Q96RN1 970 aa7.48□□□□□ -1.21
SF3A3-207ENST00000488934 NRXN3Q9Y4C0 1643 aa7.48□□□□□ -1.21
SF3A3-207ENST00000488934 ANKRD30BQ9BXX2 1392 aa7.47□□□□□ -1.21
SF3A3-207ENST00000488934 ADAMTS13Q76LX8 1427 aa7.47□□□□□ -1.21
SF3A3-207ENST00000488934 NCOA3Q9Y6Q9 1424 aa7.47□□□□□ -1.21
SF3A3-207ENST00000488934 ESPNB1AK53 854 aa7.47□□□□□ -1.21
SF3A3-207ENST00000488934 UBAP1LF5GYI3 381 aa7.47□□□□□ -1.21
SF3A3-207ENST00000488934 SNRPBP14678 240 aaKnown RBP7.47□□□□□ -1.21
SF3A3-207ENST00000488934 RAB15P59190 212 aa7.47□□□□□ -1.21
SF3A3-207ENST00000488934 LAMC1P11047 1609 aa7.46□□□□□ -1.21
SF3A3-207ENST00000488934 TMEM132AQ24JP5 1023 aa7.46□□□□□ -1.22
SF3A3-207ENST00000488934 C6orf118Q5T5N4 469 aa7.46□□□□□ -1.22
SF3A3-207ENST00000488934 WWC1Q8IX03 1113 aa7.46□□□□□ -1.22
SF3A3-207ENST00000488934 XRN1Q8IZH2 1706 aaKnown RBP7.46□□□□□ -1.22
SF3A3-207ENST00000488934 MSH6P52701 1360 aa7.46□□□□□ -1.22
SF3A3-207ENST00000488934 DISP3Q9P2K9 1392 aa7.46□□□□□ -1.22
SF3A3-207ENST00000488934 SPATA31E1Q6ZUB1 1445 aa7.45□□□□□ -1.22
SF3A3-207ENST00000488934 SETD1AO15047 1707 aaKnown RBP7.45□□□□□ -1.22
SF3A3-207ENST00000488934 EIF4G2P78344 907 aaKnown RBP eCLIP7.45□□□□□ -1.22
SF3A3-207ENST00000488934 TMEM94Q12767 1356 aa7.45□□□□□ -1.22
SF3A3-207ENST00000488934 MYOM2P54296 1465 aa7.44□□□□□ -1.22
SF3A3-207ENST00000488934 MAN1A2O60476 641 aa7.44□□□□□ -1.22
SF3A3-207ENST00000488934 FLIIQ13045 1269 aa7.44□□□□□ -1.22
SF3A3-207ENST00000488934 MCM6Q14566 821 aa7.44□□□□□ -1.22
SF3A3-207ENST00000488934 WASHC4Q2M389 1173 aa7.44□□□□□ -1.22
SF3A3-207ENST00000488934 Q6ZVU0 165 aa7.44□□□□□ -1.22
SF3A3-207ENST00000488934 PROSER2Q86WR7 435 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-207ENST00000488934 TBC1D2BQ9UPU7 963 aa7.44□□□□□ -1.22
SF3A3-207ENST00000488934 ALKQ9UM73 1620 aa7.44□□□□□ -1.22
SF3A3-207ENST00000488934 DCCP43146 1447 aa7.44□□□□□ -1.22
SF3A3-207ENST00000488934 ERVH48-1M5A8F1 160 aa7.43□□□□□ -1.22
SF3A3-207ENST00000488934 SLC16A10Q8TF71 515 aa7.43□□□□□ -1.22
SF3A3-207ENST00000488934 PTCH1Q13635 1447 aa7.43□□□□□ -1.22
SF3A3-207ENST00000488934 PRAG1Q86YV5 1406 aa7.43□□□□□ -1.22
SF3A3-207ENST00000488934 KNDC1Q76NI1 1749 aa7.42□□□□□ -1.22
SF3A3-207ENST00000488934 RAD21O60216 631 aa7.42□□□□□ -1.22
SF3A3-207ENST00000488934 ABL2P42684 1182 aa7.42□□□□□ -1.22
SF3A3-207ENST00000488934 PIP4K2BP78356 416 aa7.42□□□□□ -1.22
SF3A3-207ENST00000488934 C14orf37Q86TY3 774 aa7.42□□□□□ -1.22
SF3A3-207ENST00000488934 NPAS3Q8IXF0 933 aa7.42□□□□□ -1.22
SF3A3-207ENST00000488934 ZNF784Q8NCA9 323 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-207ENST00000488934 AMOTL2Q9Y2J4 779 aa7.42□□□□□ -1.22
SF3A3-207ENST00000488934 PIK3C2GO75747 1445 aa7.42□□□□□ -1.22
SF3A3-207ENST00000488934 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-207ENST00000488934 GPR37L1O60883 481 aa7.41□□□□□ -1.22
SF3A3-207ENST00000488934 GIGYF1O75420 1035 aaPredicted RBP7.41□□□□□ -1.22
SF3A3-207ENST00000488934 ADH1AP07327 375 aa7.41□□□□□ -1.22
SF3A3-207ENST00000488934 CBLBQ13191 982 aa7.41□□□□□ -1.22
SF3A3-207ENST00000488934 RGL3Q3MIN7 710 aa7.41□□□□□ -1.22
SF3A3-207ENST00000488934 GDPD2Q9HCC8 539 aa7.41□□□□□ -1.22
SF3A3-207ENST00000488934 TMPRSS4Q9NRS4 437 aa7.41□□□□□ -1.22
SF3A3-207ENST00000488934 METP08581 1390 aa7.41□□□□□ -1.22
SF3A3-207ENST00000488934 ROBO1Q9Y6N7 1651 aa7.41□□□□□ -1.22
SF3A3-207ENST00000488934 TTLL8A6PVC2 850 aa7.4□□□□□ -1.22
SF3A3-207ENST00000488934 TERTO14746 1132 aaKnown RBP7.4□□□□□ -1.22
SF3A3-207ENST00000488934 SPINT1O43278 529 aa7.4□□□□□ -1.22
SF3A3-207ENST00000488934 WFS1O76024 890 aa7.4□□□□□ -1.22
SF3A3-207ENST00000488934 ATF3P18847 181 aa7.4□□□□□ -1.22
SF3A3-207ENST00000488934 TRIM26Q12899 539 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-207ENST00000488934 TREML4Q6UXN2 200 aa7.4□□□□□ -1.22
SF3A3-207ENST00000488934 C19orf44Q9H6X5 657 aa7.4□□□□□ -1.22
SF3A3-207ENST00000488934 NXF1Q9UBU9 619 aaKnown RBP7.4□□□□□ -1.22
SF3A3-207ENST00000488934 FAM135BQ49AJ0 1406 aa7.4□□□□□ -1.22
SF3A3-207ENST00000488934 PTPRUQ92729 1446 aa7.4□□□□□ -1.22
SF3A3-207ENST00000488934 NRXN1Q9ULB1 1477 aa7.4□□□□□ -1.22
SF3A3-207ENST00000488934 NALCNQ8IZF0 1738 aa7.4□□□□□ -1.23
SF3A3-207ENST00000488934 TECPR2O15040 1411 aa7.39□□□□□ -1.23
SF3A3-207ENST00000488934 ADGRL3Q9HAR2 1447 aa7.39□□□□□ -1.23
SF3A3-207ENST00000488934 SOS2Q07890 1332 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-207ENST00000488934 SOX11P35716 441 aa7.39□□□□□ -1.23
SF3A3-207ENST00000488934 RELBQ01201 579 aa7.39□□□□□ -1.23
SF3A3-207ENST00000488934 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.39□□□□□ -1.23
SF3A3-207ENST00000488934 CYLDQ9NQC7 956 aa7.39□□□□□ -1.23
SF3A3-207ENST00000488934 ADGRF5Q8IZF2 1346 aa7.38□□□□□ -1.23
SF3A3-207ENST00000488934 SLFNL1Q499Z3 407 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms