RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 CCER2I3L3R5 266 aa12.72□□□□□ -0.37
PDPN-206ENST00000488631 NFIXQ14938 502 aa12.72□□□□□ -0.37
PDPN-206ENST00000488631 DUSP27Q5VZP5 1158 aa12.72□□□□□ -0.37
PDPN-206ENST00000488631 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
PDPN-206ENST00000488631 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
PDPN-206ENST00000488631 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
PDPN-206ENST00000488631 ANXA1P04083 346 aa12.71□□□□□ -0.37
PDPN-206ENST00000488631 SERPINB2P05120 415 aa12.71□□□□□ -0.37
PDPN-206ENST00000488631 TBC1D9BQ66K14 1250 aa12.71□□□□□ -0.37
PDPN-206ENST00000488631 MIER1Q8N108 512 aa12.71□□□□□ -0.37
PDPN-206ENST00000488631 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.37
PDPN-206ENST00000488631 ZBTB3Q9H5J0 574 aa12.71□□□□□ -0.37
PDPN-206ENST00000488631 TUBGCP6Q96RT7 1819 aa12.71□□□□□ -0.38
PDPN-206ENST00000488631 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
PDPN-206ENST00000488631 DDR1Q08345 913 aa12.7□□□□□ -0.38
PDPN-206ENST00000488631 CCDC27Q2M243 656 aa12.7□□□□□ -0.38
PDPN-206ENST00000488631 NBPF5PQ86XG9 351 aaPredicted RBP12.7□□□□□ -0.38
PDPN-206ENST00000488631 CHMP4AQ9BY43 222 aa12.7□□□□□ -0.38
PDPN-206ENST00000488631 NIP7Q9Y221 180 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDPN-206ENST00000488631 QSER1Q2KHR3 1735 aa12.7□□□□□ -0.38
PDPN-206ENST00000488631 ZNF831Q5JPB2 1677 aa12.7□□□□□ -0.38
PDPN-206ENST00000488631 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
PDPN-206ENST00000488631 COL5A3P25940 1745 aaPredicted RBP12.69□□□□□ -0.38
PDPN-206ENST00000488631 DLG5Q8TDM6 1919 aa12.69□□□□□ -0.38
PDPN-206ENST00000488631 A0A0G2JLW4 131 aa12.69□□□□□ -0.38
PDPN-206ENST00000488631 CAMTA2O94983 1202 aa12.69□□□□□ -0.38
PDPN-206ENST00000488631 ST5P78524 1137 aa12.69□□□□□ -0.38
PDPN-206ENST00000488631 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
PDPN-206ENST00000488631 TTLL7Q6ZT98 887 aa12.69□□□□□ -0.38
PDPN-206ENST00000488631 CCDC24Q8N4L8 307 aa12.69□□□□□ -0.38
PDPN-206ENST00000488631 MYH16Q9H6N6 1097 aa12.69□□□□□ -0.38
PDPN-206ENST00000488631 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
PDPN-206ENST00000488631 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
PDPN-206ENST00000488631 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
PDPN-206ENST00000488631 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
PDPN-206ENST00000488631 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 GPTP24298 496 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 YY1P25490 414 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 TM4SF1P30408 202 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 WDR63Q8IWG1 891 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 XAGE3Q8WTP9 111 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 STK31Q9BXU1 1019 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 DBF4Q9UBU7 674 aaPredicted RBP12.68□□□□□ -0.38
PDPN-206ENST00000488631 BCS1LQ9Y276 419 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 UBR2Q8IWV8 1755 aa12.68□□□□□ -0.38
PDPN-206ENST00000488631 TCERG1O14776 1098 aaKnown RBP12.67□□□□□ -0.38
PDPN-206ENST00000488631 HOXB7P09629 217 aa12.67□□□□□ -0.38
PDPN-206ENST00000488631 ZNF853P0CG23 659 aa12.67□□□□□ -0.38
PDPN-206ENST00000488631 DPEP1P16444 411 aa12.67□□□□□ -0.38
PDPN-206ENST00000488631 TGFB2P61812 414 aa12.67□□□□□ -0.38
PDPN-206ENST00000488631 HLFQ16534 295 aa12.67□□□□□ -0.38
PDPN-206ENST00000488631 CCDC30Q5VVM6 783 aa12.67□□□□□ -0.38
PDPN-206ENST00000488631 CLEC4GQ6UXB4 293 aa12.67□□□□□ -0.38
PDPN-206ENST00000488631 COPS6Q7L5N1 327 aa12.67□□□□□ -0.38
PDPN-206ENST00000488631 C8orf58Q8NAV2 365 aa12.67□□□□□ -0.38
PDPN-206ENST00000488631 DDX21Q9NR30 783 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDPN-206ENST00000488631 CICQ96RK0 1608 aaPredicted RBP12.66□□□□□ -0.38
PDPN-206ENST00000488631 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
PDPN-206ENST00000488631 H0YIN7 160 aa12.66□□□□□ -0.38
PDPN-206ENST00000488631 GRIN3BO60391 1043 aa12.66□□□□□ -0.38
PDPN-206ENST00000488631 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
PDPN-206ENST00000488631 PROSER3Q2NL68 480 aa12.66□□□□□ -0.38
PDPN-206ENST00000488631 TPTE2Q6XPS3 522 aa12.66□□□□□ -0.38
PDPN-206ENST00000488631 C2CD5Q86YS7 1000 aa12.66□□□□□ -0.38
PDPN-206ENST00000488631 ZNF622Q969S3 477 aaKnown RBP eCLIP12.66□□□□□ -0.38
PDPN-206ENST00000488631 HYPKQ9NX55 129 aa12.66□□□□□ -0.38
PDPN-206ENST00000488631 MYH14Q7Z406 1995 aaKnown RBP12.66□□□□□ -0.38
PDPN-206ENST00000488631 CARMIL3Q8ND23 1372 aa12.66□□□□□ -0.38
PDPN-206ENST00000488631 IL16Q14005 1332 aa12.65□□□□□ -0.38
PDPN-206ENST00000488631 ERVV-1B6SEH8 477 aa12.65□□□□□ -0.38
PDPN-206ENST00000488631 CHRNA5P30532 468 aa12.65□□□□□ -0.38
PDPN-206ENST00000488631 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
PDPN-206ENST00000488631 RIC3Q7Z5B4 369 aa12.65□□□□□ -0.38
PDPN-206ENST00000488631 PIM2Q9P1W9 311 aa12.65□□□□□ -0.38
PDPN-206ENST00000488631 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
PDPN-206ENST00000488631 PDE6BP35913 854 aa12.64□□□□□ -0.39
PDPN-206ENST00000488631 HSP90AB3PQ58FF7 597 aa12.64□□□□□ -0.39
PDPN-206ENST00000488631 DALRD3Q5D0E6 543 aaKnown RBP12.64□□□□□ -0.39
PDPN-206ENST00000488631 ZNF428Q96B54 188 aa12.64□□□□□ -0.39
PDPN-206ENST00000488631 NYXQ9GZU5 481 aa12.64□□□□□ -0.39
PDPN-206ENST00000488631 FANCIQ9NVI1 1328 aa12.63□□□□□ -0.39
PDPN-206ENST00000488631 EXOSC9Q06265 439 aaKnown RBP12.63□□□□□ -0.39
PDPN-206ENST00000488631 PDIA6Q15084 440 aa12.63□□□□□ -0.39
PDPN-206ENST00000488631 PRR5LQ6MZQ0 368 aa12.63□□□□□ -0.39
PDPN-206ENST00000488631 ARHGAP27Q6ZUM4 889 aa12.63□□□□□ -0.39
PDPN-206ENST00000488631 PPP1R42Q7Z4L9 355 aa12.63□□□□□ -0.39
PDPN-206ENST00000488631 KDM3BQ7LBC6 1761 aa12.63□□□□□ -0.39
PDPN-206ENST00000488631 YBX3P16989 372 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDPN-206ENST00000488631 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
PDPN-206ENST00000488631 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
PDPN-206ENST00000488631 BRIP1Q9BX63 1249 aa12.62□□□□□ -0.39
PDPN-206ENST00000488631 PARP10Q53GL7 1025 aa12.61□□□□□ -0.39
PDPN-206ENST00000488631 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
PDPN-206ENST00000488631 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
PDPN-206ENST00000488631 UTP14AQ9BVJ6 771 aaKnown RBP12.61□□□□□ -0.39
PDPN-206ENST00000488631 C4AP0C0L4 1744 aa12.61□□□□□ -0.39
PDPN-206ENST00000488631 C10orf71Q711Q0 1435 aa12.61□□□□□ -0.39
PDPN-206ENST00000488631 E9PSI1 815 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms