RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 ARFGEF2Q9Y6D5 1785 aa13.02□□□□□ -0.33
SUPT20H-218ENST00000488590 CACNA1SQ13698 1873 aa13.02□□□□□ -0.33
SUPT20H-218ENST00000488590 TRPM7Q96QT4 1865 aa13.02□□□□□ -0.33
SUPT20H-218ENST00000488590 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
SUPT20H-218ENST00000488590 STYK1Q6J9G0 422 aa13.01□□□□□ -0.33
SUPT20H-218ENST00000488590 BICDL1Q6ZP65 573 aa13.01□□□□□ -0.33
SUPT20H-218ENST00000488590 GPC2Q8N158 579 aa13.01□□□□□ -0.33
SUPT20H-218ENST00000488590 CNKSR1Q969H4 720 aa13.01□□□□□ -0.33
SUPT20H-218ENST00000488590 HHIPL1Q96JK4 782 aa13.01□□□□□ -0.33
SUPT20H-218ENST00000488590 ZNF277Q9NRM2 450 aaPredicted RBP13.01□□□□□ -0.33
SUPT20H-218ENST00000488590 A0A0C4DFX4 3053 aa13□□□□□ -0.33
SUPT20H-218ENST00000488590 FXR1P51114 621 aaKnown RBP eCLIP13□□□□□ -0.33
SUPT20H-218ENST00000488590 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
SUPT20H-218ENST00000488590 SOGA3Q5TF21 947 aa13□□□□□ -0.33
SUPT20H-218ENST00000488590 TBC1D9BQ66K14 1250 aa13□□□□□ -0.33
SUPT20H-218ENST00000488590 CARD11Q9BXL7 1154 aa13□□□□□ -0.33
SUPT20H-218ENST00000488590 SCNN1DP51172 638 aa12.99□□□□□ -0.33
SUPT20H-218ENST00000488590 OLFM4Q6UX06 510 aa12.99□□□□□ -0.33
SUPT20H-218ENST00000488590 CUL9Q8IWT3 2517 aa12.99□□□□□ -0.33
SUPT20H-218ENST00000488590 COL4A5P29400 1685 aa12.99□□□□□ -0.33
SUPT20H-218ENST00000488590 SNED1Q8TER0 1413 aa12.98□□□□□ -0.33
SUPT20H-218ENST00000488590 PPM1GO15355 546 aaPredicted RBP12.98□□□□□ -0.33
SUPT20H-218ENST00000488590 EPS15P42566 896 aa12.98□□□□□ -0.33
SUPT20H-218ENST00000488590 CCDC93Q567U6 631 aa12.98□□□□□ -0.33
SUPT20H-218ENST00000488590 KIF20BQ96Q89 1820 aa12.97□□□□□ -0.33
SUPT20H-218ENST00000488590 ST20-MTHFSA0A0A6YYL1 179 aa12.97□□□□□ -0.33
SUPT20H-218ENST00000488590 MTHFSP49914 203 aa12.97□□□□□ -0.33
SUPT20H-218ENST00000488590 EIF4A2Q14240 407 aaKnown RBP12.97□□□□□ -0.33
SUPT20H-218ENST00000488590 NBPF15Q8N660 670 aa12.97□□□□□ -0.33
SUPT20H-218ENST00000488590 MASTLQ96GX5 879 aa12.97□□□□□ -0.33
SUPT20H-218ENST00000488590 SIN3AQ96ST3 1273 aa12.97□□□□□ -0.33
SUPT20H-218ENST00000488590 EIF5P55010 431 aaKnown RBP12.96□□□□□ -0.33
SUPT20H-218ENST00000488590 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.33
SUPT20H-218ENST00000488590 CELF2O95319 508 aaKnown RBP12.95□□□□□ -0.34
SUPT20H-218ENST00000488590 IARSP41252 1262 aaKnown RBP12.95□□□□□ -0.34
SUPT20H-218ENST00000488590 NOGQ13253 232 aa12.95□□□□□ -0.34
SUPT20H-218ENST00000488590 PLEKHO1Q53GL0 409 aaPredicted RBP12.95□□□□□ -0.34
SUPT20H-218ENST00000488590 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
SUPT20H-218ENST00000488590 CARD14Q9BXL6 1004 aa12.95□□□□□ -0.34
SUPT20H-218ENST00000488590 POLKQ9UBT6 870 aa12.95□□□□□ -0.34
SUPT20H-218ENST00000488590 HPS5Q9UPZ3 1129 aa12.95□□□□□ -0.34
SUPT20H-218ENST00000488590 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
SUPT20H-218ENST00000488590 DLL1O00548 723 aa12.94□□□□□ -0.34
SUPT20H-218ENST00000488590 SAGE1Q9NXZ1 904 aa12.94□□□□□ -0.34
SUPT20H-218ENST00000488590 FAM155AB1AL88 458 aaPredicted RBP12.93□□□□□ -0.34
SUPT20H-218ENST00000488590 CTU1Q7Z7A3 348 aaKnown RBP12.93□□□□□ -0.34
SUPT20H-218ENST00000488590 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
SUPT20H-218ENST00000488590 KLRG2A4D1S0 409 aaPredicted RBP12.92□□□□□ -0.34
SUPT20H-218ENST00000488590 CANXP27824 592 aaKnown RBP12.92□□□□□ -0.34
SUPT20H-218ENST00000488590 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
SUPT20H-218ENST00000488590 AMOTQ4VCS5 1084 aa12.92□□□□□ -0.34
SUPT20H-218ENST00000488590 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
SUPT20H-218ENST00000488590 GLIS2Q9BZE0 524 aaPredicted RBP12.92□□□□□ -0.34
SUPT20H-218ENST00000488590 RNF186Q9NXI6 227 aa12.92□□□□□ -0.34
SUPT20H-218ENST00000488590 PGAP2Q9UHJ9 254 aa12.92□□□□□ -0.34
SUPT20H-218ENST00000488590 GJA3Q9Y6H8 435 aa12.92□□□□□ -0.34
SUPT20H-218ENST00000488590 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
SUPT20H-218ENST00000488590 CNBD1Q8NA66 436 aa12.91□□□□□ -0.34
SUPT20H-218ENST00000488590 SCN11AQ9UI33 1791 aa12.9□□□□□ -0.34
SUPT20H-218ENST00000488590 LMOD1P29536 600 aaPredicted RBP12.9□□□□□ -0.34
SUPT20H-218ENST00000488590 SLC52A2Q9HAB3 445 aa12.9□□□□□ -0.34
SUPT20H-218ENST00000488590 HTTP42858 3142 aa12.9□□□□□ -0.34
SUPT20H-218ENST00000488590 BRCA2P51587 3418 aa12.9□□□□□ -0.35
SUPT20H-218ENST00000488590 TRPA1O75762 1119 aa12.89□□□□□ -0.35
SUPT20H-218ENST00000488590 NPR1P16066 1061 aa12.89□□□□□ -0.35
SUPT20H-218ENST00000488590 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
SUPT20H-218ENST00000488590 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
SUPT20H-218ENST00000488590 PSMD1Q99460 953 aa12.89□□□□□ -0.35
SUPT20H-218ENST00000488590 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
SUPT20H-218ENST00000488590 MRC1P22897 1456 aa12.89□□□□□ -0.35
SUPT20H-218ENST00000488590 COL6A3P12111 3177 aa12.89□□□□□ -0.35
SUPT20H-218ENST00000488590 A0A087WZG4 1122 aa12.88□□□□□ -0.35
SUPT20H-218ENST00000488590 EIF6P56537 245 aaKnown RBP12.88□□□□□ -0.35
SUPT20H-218ENST00000488590 KIF23Q02241 960 aaPredicted RBP12.88□□□□□ -0.35
SUPT20H-218ENST00000488590 C1orf141Q5JVX7 400 aa12.88□□□□□ -0.35
SUPT20H-218ENST00000488590 JDP2Q8WYK2 163 aa12.88□□□□□ -0.35
SUPT20H-218ENST00000488590 LGR6Q9HBX8 967 aa12.88□□□□□ -0.35
SUPT20H-218ENST00000488590 RANBP2P49792 3224 aaKnown RBP12.87□□□□□ -0.35
SUPT20H-218ENST00000488590 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
SUPT20H-218ENST00000488590 HIRAP54198 1017 aaPredicted RBP12.87□□□□□ -0.35
SUPT20H-218ENST00000488590 ST5P78524 1137 aa12.87□□□□□ -0.35
SUPT20H-218ENST00000488590 AKAP4Q5JQC9 854 aa12.87□□□□□ -0.35
SUPT20H-218ENST00000488590 DLK2Q6UY11 383 aa12.87□□□□□ -0.35
SUPT20H-218ENST00000488590 SETDB2Q96T68 719 aa12.87□□□□□ -0.35
SUPT20H-218ENST00000488590 ADARB2Q9NS39 739 aaKnown RBP12.87□□□□□ -0.35
SUPT20H-218ENST00000488590 GPRC5DQ9NZD1 345 aa12.87□□□□□ -0.35
SUPT20H-218ENST00000488590 TRIOBPQ9H2D6 2365 aa12.86□□□□□ -0.35
SUPT20H-218ENST00000488590 HUNKP57058 714 aa12.86□□□□□ -0.35
SUPT20H-218ENST00000488590 NEUROD1Q13562 356 aa12.86□□□□□ -0.35
SUPT20H-218ENST00000488590 ZNF408Q9H9D4 720 aa12.86□□□□□ -0.35
SUPT20H-218ENST00000488590 UBR2Q8IWV8 1755 aa12.85□□□□□ -0.35
SUPT20H-218ENST00000488590 SLC51AQ86UW1 340 aa12.85□□□□□ -0.35
SUPT20H-218ENST00000488590 CSRNP1Q96S65 589 aa12.85□□□□□ -0.35
SUPT20H-218ENST00000488590 CENPFP49454 3210 aa12.85□□□□□ -0.35
SUPT20H-218ENST00000488590 PKN2Q16513 984 aaKnown RBP12.84□□□□□ -0.35
SUPT20H-218ENST00000488590 RGMBQ6NW40 437 aa12.84□□□□□ -0.35
SUPT20H-218ENST00000488590 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
SUPT20H-218ENST00000488590 IL6STP40189 918 aaPredicted RBP12.83□□□□□ -0.36
SUPT20H-218ENST00000488590 CDC37L1Q7L3B6 337 aa12.83□□□□□ -0.36
SUPT20H-218ENST00000488590 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms