RNA–Protein interactions for RNA: ENST00000487942.1

SCAP-212, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-212ENST00000487942 WWC3Q9ULE0 1092 aa10.07□□□□□ -0.8
SCAP-212ENST00000487942 CNTNAP4Q9C0A0 1308 aa10.07□□□□□ -0.8
SCAP-212ENST00000487942 HMGB2P26583 209 aaKnown RBP10.06□□□□□ -0.8
SCAP-212ENST00000487942 TRAPPC3LQ5T215 181 aa10.06□□□□□ -0.8
SCAP-212ENST00000487942 RC3H1Q5TC82 1133 aaKnown RBP10.06□□□□□ -0.8
SCAP-212ENST00000487942 ZNF710Q8N1W2 664 aa10.06□□□□□ -0.8
SCAP-212ENST00000487942 ZNF784Q8NCA9 323 aaPredicted RBP10.06□□□□□ -0.8
SCAP-212ENST00000487942 ARHGEF1Q92888 912 aaKnown RBP10.06□□□□□ -0.8
SCAP-212ENST00000487942 RTCBQ9Y3I0 505 aaKnown RBP10.06□□□□□ -0.8
SCAP-212ENST00000487942 CD2APQ9Y5K6 639 aa10.06□□□□□ -0.8
SCAP-212ENST00000487942 GOLGB1Q14789 3259 aaKnown RBP10.06□□□□□ -0.8
SCAP-212ENST00000487942 ARFGEF1Q9Y6D6 1849 aa10.05□□□□□ -0.8
SCAP-212ENST00000487942 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
SCAP-212ENST00000487942 RPS6KA4O75676 772 aa10.05□□□□□ -0.8
SCAP-212ENST00000487942 MMP10P09238 476 aa10.05□□□□□ -0.8
SCAP-212ENST00000487942 PPP2R1AP30153 589 aa10.05□□□□□ -0.8
SCAP-212ENST00000487942 CRKLP46109 303 aaKnown RBP10.05□□□□□ -0.8
SCAP-212ENST00000487942 DOK7Q18PE1 504 aa10.05□□□□□ -0.8
SCAP-212ENST00000487942 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
SCAP-212ENST00000487942 DNAJC10Q8IXB1 793 aa10.05□□□□□ -0.8
SCAP-212ENST00000487942 PHACTR3Q96KR7 559 aa10.05□□□□□ -0.8
SCAP-212ENST00000487942 CCDC88AQ3V6T2 1871 aa10.04□□□□□ -0.8
SCAP-212ENST00000487942 FAM205CA6NFA0 338 aa10.04□□□□□ -0.8
SCAP-212ENST00000487942 PPP1R37O75864 691 aa10.04□□□□□ -0.8
SCAP-212ENST00000487942 GYS1P13807 737 aa10.04□□□□□ -0.8
SCAP-212ENST00000487942 INTS5Q6P9B9 1019 aaKnown RBP10.04□□□□□ -0.8
SCAP-212ENST00000487942 SRP68Q9UHB9 627 aaKnown RBP10.04□□□□□ -0.8
SCAP-212ENST00000487942 SBF1O95248 1867 aa10.03□□□□□ -0.8
SCAP-212ENST00000487942 RFC4P35249 363 aa10.03□□□□□ -0.8
SCAP-212ENST00000487942 CACNA1SQ13698 1873 aa10.03□□□□□ -0.8
SCAP-212ENST00000487942 HS6ST3Q8IZP7 471 aa10.03□□□□□ -0.8
SCAP-212ENST00000487942 IL17REQ8NFR9 667 aa10.03□□□□□ -0.8
SCAP-212ENST00000487942 ANKRD31Q8N7Z5 1873 aa10.02□□□□□ -0.8
SCAP-212ENST00000487942 NRXN2Q9P2S2 1712 aa10.02□□□□□ -0.8
SCAP-212ENST00000487942 DLEC1Q9Y238 1755 aa10.02□□□□□ -0.81
SCAP-212ENST00000487942 CYP19A1P11511 503 aaPredicted RBP10.02□□□□□ -0.81
SCAP-212ENST00000487942 PRKAR2BP31323 418 aa10.02□□□□□ -0.81
SCAP-212ENST00000487942 RSPH6AQ9H0K4 717 aa10.02□□□□□ -0.81
SCAP-212ENST00000487942 PXDNLA1KZ92 1463 aa10.02□□□□□ -0.81
SCAP-212ENST00000487942 C10orf71Q711Q0 1435 aa10.01□□□□□ -0.81
SCAP-212ENST00000487942 GNAT3A8MTJ3 354 aa10.01□□□□□ -0.81
SCAP-212ENST00000487942 HOXB1P14653 301 aaPredicted RBP10.01□□□□□ -0.81
SCAP-212ENST00000487942 NLGN1Q8N2Q7 840 aa10.01□□□□□ -0.81
SCAP-212ENST00000487942 CFAP53Q96M91 514 aa10.01□□□□□ -0.81
SCAP-212ENST00000487942 HS3ST6Q96QI5 342 aa10.01□□□□□ -0.81
SCAP-212ENST00000487942 CCDC87Q9NVE4 849 aa10.01□□□□□ -0.81
SCAP-212ENST00000487942 SCN7AQ01118 1682 aa10.01□□□□□ -0.81
SCAP-212ENST00000487942 USP42Q9H9J4 1324 aaKnown RBP10.01□□□□□ -0.81
SCAP-212ENST00000487942 BCORQ6W2J9 1755 aa10.01□□□□□ -0.81
SCAP-212ENST00000487942 KCNQ3O43525 872 aa10□□□□□ -0.81
SCAP-212ENST00000487942 U2AF1L5P0DN76 240 aaPredicted RBP10□□□□□ -0.81
SCAP-212ENST00000487942 U2AF1Q01081 240 aaKnown RBP eCLIP10□□□□□ -0.81
SCAP-212ENST00000487942 DDR1Q08345 913 aa10□□□□□ -0.81
SCAP-212ENST00000487942 GAS2L2Q8NHY3 880 aa10□□□□□ -0.81
SCAP-212ENST00000487942 ZNF496Q96IT1 587 aaPredicted RBP10□□□□□ -0.81
SCAP-212ENST00000487942 ZBTB1Q9Y2K1 713 aa10□□□□□ -0.81
SCAP-212ENST00000487942 KDM3BQ7LBC6 1761 aa10□□□□□ -0.81
SCAP-212ENST00000487942 SOS1Q07889 1333 aaPredicted RBP10□□□□□ -0.81
SCAP-212ENST00000487942 CEMIPQ8WUJ3 1361 aa10□□□□□ -0.81
SCAP-212ENST00000487942 LAMB4A4D0S4 1761 aa9.99□□□□□ -0.81
SCAP-212ENST00000487942 A0A0G2JLW4 131 aa9.99□□□□□ -0.81
SCAP-212ENST00000487942 GRIN3BO60391 1043 aa9.99□□□□□ -0.81
SCAP-212ENST00000487942 USPL1Q5W0Q7 1092 aa9.99□□□□□ -0.81
SCAP-212ENST00000487942 COL15A1P39059 1388 aa9.99□□□□□ -0.81
SCAP-212ENST00000487942 C2orf72A6NCS6 295 aa9.98□□□□□ -0.81
SCAP-212ENST00000487942 DPEP1P16444 411 aa9.98□□□□□ -0.81
SCAP-212ENST00000487942 CANXP27824 592 aaKnown RBP9.98□□□□□ -0.81
SCAP-212ENST00000487942 TEFQ10587 303 aa9.98□□□□□ -0.81
SCAP-212ENST00000487942 DCTN1Q14203 1278 aa9.98□□□□□ -0.81
SCAP-212ENST00000487942 ZNF790Q6PG37 636 aa9.98□□□□□ -0.81
SCAP-212ENST00000487942 MCM10Q7L590 875 aa9.98□□□□□ -0.81
SCAP-212ENST00000487942 BCL2L12Q9HB09 334 aa9.98□□□□□ -0.81
SCAP-212ENST00000487942 PARP3Q9Y6F1 533 aa9.98□□□□□ -0.81
SCAP-212ENST00000487942 COL11A2P13942 1736 aaPredicted RBP9.98□□□□□ -0.81
SCAP-212ENST00000487942 HEG1Q9ULI3 1381 aa9.98□□□□□ -0.81
SCAP-212ENST00000487942 KIF3CO14782 793 aa9.97□□□□□ -0.81
SCAP-212ENST00000487942 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
SCAP-212ENST00000487942 TM4SF1P30408 202 aa9.97□□□□□ -0.81
SCAP-212ENST00000487942 TTC5Q8N0Z6 440 aa9.97□□□□□ -0.81
SCAP-212ENST00000487942 VSIG10Q8N0Z9 540 aa9.97□□□□□ -0.81
SCAP-212ENST00000487942 NUDCQ9Y266 331 aa9.97□□□□□ -0.81
SCAP-212ENST00000487942 NUP98P52948 1817 aa9.97□□□□□ -0.81
SCAP-212ENST00000487942 ATP10DQ9P241 1426 aa9.97□□□□□ -0.81
SCAP-212ENST00000487942 PRAMEF22A3QJZ6 481 aa9.96□□□□□ -0.82
SCAP-212ENST00000487942 POLRMTO00411 1230 aaKnown RBP9.96□□□□□ -0.82
SCAP-212ENST00000487942 ZPR1O75312 459 aa9.96□□□□□ -0.82
SCAP-212ENST00000487942 FCHSD2O94868 740 aa9.96□□□□□ -0.82
SCAP-212ENST00000487942 KCNA3P22001 575 aa9.96□□□□□ -0.82
SCAP-212ENST00000487942 TGFB2P61812 414 aa9.96□□□□□ -0.82
SCAP-212ENST00000487942 NFIXQ14938 502 aa9.96□□□□□ -0.82
SCAP-212ENST00000487942 NARFQ9UHQ1 456 aa9.96□□□□□ -0.82
SCAP-212ENST00000487942 ADCY9O60503 1353 aa9.96□□□□□ -0.82
SCAP-212ENST00000487942 BTBD11A6QL63 1104 aa9.95□□□□□ -0.82
SCAP-212ENST00000487942 A1BGP04217 495 aa9.95□□□□□ -0.82
SCAP-212ENST00000487942 CHRNA5P30532 468 aa9.95□□□□□ -0.82
SCAP-212ENST00000487942 PIP4K2AP48426 406 aaPredicted RBP9.95□□□□□ -0.82
SCAP-212ENST00000487942 EIF5P55010 431 aaKnown RBP9.95□□□□□ -0.82
SCAP-212ENST00000487942 GPR153Q6NV75 609 aa9.95□□□□□ -0.82
SCAP-212ENST00000487942 BCS1LQ9Y276 419 aa9.95□□□□□ -0.82
SCAP-212ENST00000487942 DDX10Q13206 875 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms