RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 SBF1O95248 1867 aa31.04■■■□□ 2.56
PLOD3-215ENST00000487563 LMOD3Q0VAK6 560 aa31.04■■■□□ 2.56
PLOD3-215ENST00000487563 NGEFQ8N5V2 710 aa31.04■■■□□ 2.56
PLOD3-215ENST00000487563 TSPYL4Q9UJ04 414 aa31.04■■■□□ 2.56
PLOD3-215ENST00000487563 NIP7Q9Y221 180 aaKnown RBP eCLIP31.04■■■□□ 2.56
PLOD3-215ENST00000487563 RGL2O15211 777 aa31.03■■■□□ 2.56
PLOD3-215ENST00000487563 LMNB1P20700 586 aa31.03■■■□□ 2.56
PLOD3-215ENST00000487563 WDR43Q15061 677 aaKnown RBP eCLIP31.03■■■□□ 2.56
PLOD3-215ENST00000487563 ZNF219Q9P2Y4 722 aaPredicted RBP31.03■■■□□ 2.56
PLOD3-215ENST00000487563 RRP7AQ9Y3A4 280 aaKnown RBP31.02■■■□□ 2.56
PLOD3-215ENST00000487563 TMPOP42166 694 aaKnown RBP31.01■■■□□ 2.55
PLOD3-215ENST00000487563 HSPA6P17066 643 aa31■■■□□ 2.55
PLOD3-215ENST00000487563 CCDC146Q8IYE0 955 aa31■■■□□ 2.55
PLOD3-215ENST00000487563 CNKSR1Q969H4 720 aa31■■■□□ 2.55
PLOD3-215ENST00000487563 FAM177BA6PVY3 158 aa30.99■■■□□ 2.55
PLOD3-215ENST00000487563 C21orf2O43822 256 aa30.99■■■□□ 2.55
PLOD3-215ENST00000487563 TOMM70O94826 608 aa30.99■■■□□ 2.55
PLOD3-215ENST00000487563 MYL6BP14649 208 aa30.99■■■□□ 2.55
PLOD3-215ENST00000487563 STYK1Q6J9G0 422 aa30.99■■■□□ 2.55
PLOD3-215ENST00000487563 TPTE2Q6XPS3 522 aa30.99■■■□□ 2.55
PLOD3-215ENST00000487563 KIF6Q6ZMV9 814 aa30.99■■■□□ 2.55
PLOD3-215ENST00000487563 C16orf71Q8IYS4 520 aaPredicted RBP30.99■■■□□ 2.55
PLOD3-215ENST00000487563 ZC3H4Q9UPT8 1303 aaKnown RBP30.98■■■□□ 2.55
PLOD3-215ENST00000487563 HLFQ16534 295 aa30.98■■■□□ 2.55
PLOD3-215ENST00000487563 MASTLQ96GX5 879 aa30.98■■■□□ 2.55
PLOD3-215ENST00000487563 NFKBIEO00221 500 aa30.97■■■□□ 2.55
PLOD3-215ENST00000487563 SRGNP10124 158 aa30.97■■■□□ 2.55
PLOD3-215ENST00000487563 GTF2E1P29083 439 aaPredicted RBP30.96■■■□□ 2.55
PLOD3-215ENST00000487563 NEUROD2Q15784 382 aa30.96■■■□□ 2.55
PLOD3-215ENST00000487563 PRPF40BQ6NWY9 871 aaKnown RBP30.95■■■□□ 2.55
PLOD3-215ENST00000487563 CACNA1SQ13698 1873 aa30.95■■■□□ 2.54
PLOD3-215ENST00000487563 MAP3K15Q6ZN16 1313 aa30.95■■■□□ 2.54
PLOD3-215ENST00000487563 ERVV-1B6SEH8 477 aa30.94■■■□□ 2.54
PLOD3-215ENST00000487563 TIAM2Q8IVF5 1701 aa30.94■■■□□ 2.54
PLOD3-215ENST00000487563 BABAM1Q9NWV8 329 aa30.94■■■□□ 2.54
PLOD3-215ENST00000487563 ERBB4Q15303 1308 aa30.94■■■□□ 2.54
PLOD3-215ENST00000487563 TNRC6CQ9HCJ0 1690 aaKnown RBP30.93■■■□□ 2.54
PLOD3-215ENST00000487563 PRELPP51888 382 aa30.93■■■□□ 2.54
PLOD3-215ENST00000487563 TTLL7Q6ZT98 887 aa30.93■■■□□ 2.54
PLOD3-215ENST00000487563 RUNDC1Q96C34 613 aa30.93■■■□□ 2.54
PLOD3-215ENST00000487563 SOGA3Q5TF21 947 aa30.92■■■□□ 2.54
PLOD3-215ENST00000487563 RRAGCQ9HB90 399 aa30.92■■■□□ 2.54
PLOD3-215ENST00000487563 CCDC88AQ3V6T2 1871 aa30.91■■■□□ 2.54
PLOD3-215ENST00000487563 NPR1P16066 1061 aa30.91■■■□□ 2.54
PLOD3-215ENST00000487563 EIF2S2P20042 333 aaKnown RBP30.91■■■□□ 2.54
PLOD3-215ENST00000487563 NYXQ9GZU5 481 aa30.91■■■□□ 2.54
PLOD3-215ENST00000487563 ZBTB3Q9H5J0 574 aa30.91■■■□□ 2.54
PLOD3-215ENST00000487563 PRKRIP1Q9H875 184 aaPredicted RBP30.91■■■□□ 2.54
PLOD3-215ENST00000487563 ARFGEF2Q9Y6D5 1785 aa30.91■■■□□ 2.54
PLOD3-215ENST00000487563 SLX4Q8IY92 1834 aa30.91■■■□□ 2.54
PLOD3-215ENST00000487563 TAOK3Q9H2K8 898 aa30.9■■■□□ 2.54
PLOD3-215ENST00000487563 RBM46Q8TBY0 533 aaKnown RBP30.89■■■□□ 2.54
PLOD3-215ENST00000487563 NUP98P52948 1817 aa30.89■■■□□ 2.53
PLOD3-215ENST00000487563 FER1L6Q2WGJ9 1857 aa30.89■■■□□ 2.53
PLOD3-215ENST00000487563 ADAMTS8Q9UP79 889 aa30.88■■■□□ 2.53
PLOD3-215ENST00000487563 GLTPD2A6NH11 291 aa30.87■■■□□ 2.53
PLOD3-215ENST00000487563 GPTP24298 496 aa30.87■■■□□ 2.53
PLOD3-215ENST00000487563 LAS1LQ9Y4W2 734 aaKnown RBP30.87■■■□□ 2.53
PLOD3-215ENST00000487563 LTBP3Q9NS15 1303 aa30.87■■■□□ 2.53
PLOD3-215ENST00000487563 ERFEQ4G0M1 354 aa30.86■■■□□ 2.53
PLOD3-215ENST00000487563 KLRG2A4D1S0 409 aaPredicted RBP30.85■■■□□ 2.53
PLOD3-215ENST00000487563 NUTM1Q86Y26 1132 aa30.85■■■□□ 2.53
PLOD3-215ENST00000487563 ABCC12Q96J65 1359 aa30.84■■■□□ 2.53
PLOD3-215ENST00000487563 APLP1P51693 650 aa30.84■■■□□ 2.53
PLOD3-215ENST00000487563 CCDC93Q567U6 631 aa30.84■■■□□ 2.53
PLOD3-215ENST00000487563 CEP350Q5VT06 3117 aa30.83■■■□□ 2.53
PLOD3-215ENST00000487563 DPY19L2Q6NUT2 758 aa30.83■■■□□ 2.53
PLOD3-215ENST00000487563 TRIM35Q9UPQ4 493 aa30.83■■■□□ 2.53
PLOD3-215ENST00000487563 IBTKQ9P2D0 1353 aaPredicted RBP30.82■■■□□ 2.52
PLOD3-215ENST00000487563 GIGYF2Q6Y7W6 1299 aaKnown RBP30.82■■■□□ 2.52
PLOD3-215ENST00000487563 NECTIN2Q92692 538 aa30.82■■■□□ 2.52
PLOD3-215ENST00000487563 UBN2Q6ZU65 1347 aa30.81■■■□□ 2.52
PLOD3-215ENST00000487563 ANXA1P04083 346 aa30.81■■■□□ 2.52
PLOD3-215ENST00000487563 ALDH1B1P30837 517 aa30.81■■■□□ 2.52
PLOD3-215ENST00000487563 FSTL1Q12841 308 aa30.81■■■□□ 2.52
PLOD3-215ENST00000487563 DICER1Q9UPY3 1922 aaKnown RBP30.81■■■□□ 2.52
PLOD3-215ENST00000487563 CHL1O00533 1208 aa30.8■■■□□ 2.52
PLOD3-215ENST00000487563 VEGFAP15692 232 aaPredicted RBP30.8■■■□□ 2.52
PLOD3-215ENST00000487563 PDIA6Q15084 440 aa30.8■■■□□ 2.52
PLOD3-215ENST00000487563 PROSER3Q2NL68 480 aa30.8■■■□□ 2.52
PLOD3-215ENST00000487563 ZNF34Q8IZ26 560 aa30.79■■■□□ 2.52
PLOD3-215ENST00000487563 C7orf43Q8WVR3 580 aa30.79■■■□□ 2.52
PLOD3-215ENST00000487563 SUSD4Q5VX71 490 aa30.78■■■□□ 2.52
PLOD3-215ENST00000487563 LRP10Q7Z4F1 713 aa30.78■■■□□ 2.52
PLOD3-215ENST00000487563 RPGRQ92834 1020 aaKnown RBP30.78■■■□□ 2.52
PLOD3-215ENST00000487563 KRT24Q2M2I5 525 aa30.77■■■□□ 2.52
PLOD3-215ENST00000487563 PARP10Q53GL7 1025 aa30.77■■■□□ 2.52
PLOD3-215ENST00000487563 PPP1R42Q7Z4L9 355 aa30.77■■■□□ 2.52
PLOD3-215ENST00000487563 RIC1Q4ADV7 1423 aa30.76■■■□□ 2.51
PLOD3-215ENST00000487563 AIMP1Q12904 312 aaKnown RBP30.76■■■□□ 2.51
PLOD3-215ENST00000487563 CRY2Q49AN0 593 aa30.76■■■□□ 2.51
PLOD3-215ENST00000487563 SMC1BQ8NDV3 1235 aa30.76■■■□□ 2.51
PLOD3-215ENST00000487563 NTSR2O95665 410 aa30.75■■■□□ 2.51
PLOD3-215ENST00000487563 FKBP4Q02790 459 aaKnown RBP eCLIP30.75■■■□□ 2.51
PLOD3-215ENST00000487563 RTKN2Q8IZC4 609 aa30.75■■■□□ 2.51
PLOD3-215ENST00000487563 OLFM4Q6UX06 510 aa30.74■■■□□ 2.51
PLOD3-215ENST00000487563 COPS6Q7L5N1 327 aa30.74■■■□□ 2.51
PLOD3-215ENST00000487563 XAGE3Q8WTP9 111 aa30.74■■■□□ 2.51
PLOD3-215ENST00000487563 DDX21Q9NR30 783 aaKnown RBP eCLIP30.74■■■□□ 2.51
PLOD3-215ENST00000487563 ZEB1P37275 1124 aaPredicted RBP30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms