RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
TOP3B-216ENST00000487485 RASSF7Q02833 373 aa13.88□□□□□ -0.19
TOP3B-216ENST00000487485 INTS5Q6P9B9 1019 aaKnown RBP13.88□□□□□ -0.19
TOP3B-216ENST00000487485 DNAJC10Q8IXB1 793 aa13.87□□□□□ -0.19
TOP3B-216ENST00000487485 SNRPA1P09661 255 aaKnown RBP13.86□□□□□ -0.19
TOP3B-216ENST00000487485 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
TOP3B-216ENST00000487485 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
TOP3B-216ENST00000487485 TSR2Q969E8 191 aaKnown RBP13.86□□□□□ -0.19
TOP3B-216ENST00000487485 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-216ENST00000487485 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-216ENST00000487485 PRAMEF22A3QJZ6 481 aa13.85□□□□□ -0.19
TOP3B-216ENST00000487485 HSPA1AP0DMV8 641 aaKnown RBP13.85□□□□□ -0.19
TOP3B-216ENST00000487485 HSPA1BP0DMV9 641 aaKnown RBP13.85□□□□□ -0.19
TOP3B-216ENST00000487485 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
TOP3B-216ENST00000487485 GLTPD2A6NH11 291 aa13.84□□□□□ -0.19
TOP3B-216ENST00000487485 ZPR1O75312 459 aa13.84□□□□□ -0.19
TOP3B-216ENST00000487485 CYP19A1P11511 503 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-216ENST00000487485 VEGFAP15692 232 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-216ENST00000487485 MYH16Q9H6N6 1097 aa13.84□□□□□ -0.19
TOP3B-216ENST00000487485 USP16Q9Y5T5 823 aa13.84□□□□□ -0.19
TOP3B-216ENST00000487485 TNRC6CQ9HCJ0 1690 aaKnown RBP13.83□□□□□ -0.2
TOP3B-216ENST00000487485 STARD3NLO95772 234 aa13.83□□□□□ -0.2
TOP3B-216ENST00000487485 LMNB1P20700 586 aa13.83□□□□□ -0.2
TOP3B-216ENST00000487485 NFIXQ14938 502 aa13.83□□□□□ -0.2
TOP3B-216ENST00000487485 KRT24Q2M2I5 525 aa13.83□□□□□ -0.2
TOP3B-216ENST00000487485 CDCA7LQ96GN5 454 aa13.83□□□□□ -0.2
TOP3B-216ENST00000487485 FANCIQ9NVI1 1328 aa13.83□□□□□ -0.2
TOP3B-216ENST00000487485 POTECB2RU33 542 aa13.82□□□□□ -0.2
TOP3B-216ENST00000487485 E9PSI1 815 aa13.82□□□□□ -0.2
TOP3B-216ENST00000487485 SLFN5Q08AF3 891 aa13.82□□□□□ -0.2
TOP3B-216ENST00000487485 C8orf58Q8NAV2 365 aa13.82□□□□□ -0.2
TOP3B-216ENST00000487485 SOS1Q07889 1333 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-216ENST00000487485 ZC3H4Q9UPT8 1303 aaKnown RBP13.82□□□□□ -0.2
TOP3B-216ENST00000487485 CCDC88AQ3V6T2 1871 aa13.82□□□□□ -0.2
TOP3B-216ENST00000487485 ELL2O00472 640 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-216ENST00000487485 DUSP27Q5VZP5 1158 aa13.81□□□□□ -0.2
TOP3B-216ENST00000487485 TTLL6Q8N841 843 aa13.81□□□□□ -0.2
TOP3B-216ENST00000487485 BCL2L12Q9HB09 334 aa13.81□□□□□ -0.2
TOP3B-216ENST00000487485 ZBED9Q6R2W3 1325 aa13.81□□□□□ -0.2
TOP3B-216ENST00000487485 AFDNP55196 1824 aaKnown RBP13.8□□□□□ -0.2
TOP3B-216ENST00000487485 NFKBIEO00221 500 aa13.8□□□□□ -0.2
TOP3B-216ENST00000487485 A1BGP04217 495 aa13.8□□□□□ -0.2
TOP3B-216ENST00000487485 SERPINB2P05120 415 aa13.8□□□□□ -0.2
TOP3B-216ENST00000487485 EIF2S2P20042 333 aaKnown RBP13.8□□□□□ -0.2
TOP3B-216ENST00000487485 EXOSC9Q06265 439 aaKnown RBP13.8□□□□□ -0.2
TOP3B-216ENST00000487485 C2CD5Q86YS7 1000 aa13.8□□□□□ -0.2
TOP3B-216ENST00000487485 NARFQ9UHQ1 456 aa13.8□□□□□ -0.2
TOP3B-216ENST00000487485 HOXB7P09629 217 aa13.79□□□□□ -0.2
TOP3B-216ENST00000487485 CANXP27824 592 aaKnown RBP13.79□□□□□ -0.2
TOP3B-216ENST00000487485 TRMT2AQ8IZ69 625 aaKnown RBP13.79□□□□□ -0.2
TOP3B-216ENST00000487485 TSPYL6Q8N831 410 aa13.79□□□□□ -0.2
TOP3B-216ENST00000487485 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
TOP3B-216ENST00000487485 TWISTNBQ3B726 338 aaPredicted RBP13.78□□□□□ -0.2
TOP3B-216ENST00000487485 NECTIN2Q92692 538 aa13.78□□□□□ -0.2
TOP3B-216ENST00000487485 YTHDC1Q96MU7 727 aaKnown RBP13.78□□□□□ -0.2
TOP3B-216ENST00000487485 H0YIN7 160 aa13.77□□□□□ -0.21
TOP3B-216ENST00000487485 PIP4K2AP48426 406 aaPredicted RBP13.77□□□□□ -0.21
TOP3B-216ENST00000487485 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.21
TOP3B-216ENST00000487485 CARMIL3Q8ND23 1372 aa13.76□□□□□ -0.21
TOP3B-216ENST00000487485 NBPF26B4DH59 902 aa13.76□□□□□ -0.21
TOP3B-216ENST00000487485 VAMP4O75379 141 aa13.76□□□□□ -0.21
TOP3B-216ENST00000487485 IL6STP40189 918 aaPredicted RBP13.76□□□□□ -0.21
TOP3B-216ENST00000487485 NBPF10Q6P3W6 841 aaKnown RBP13.76□□□□□ -0.21
TOP3B-216ENST00000487485 BICDL1Q6ZP65 573 aa13.76□□□□□ -0.21
TOP3B-216ENST00000487485 NBPF15Q8N660 670 aa13.76□□□□□ -0.21
TOP3B-216ENST00000487485 ZNF219Q9P2Y4 722 aaPredicted RBP13.76□□□□□ -0.21
TOP3B-216ENST00000487485 COL15A1P39059 1388 aa13.75□□□□□ -0.21
TOP3B-216ENST00000487485 ERBB4Q15303 1308 aa13.75□□□□□ -0.21
TOP3B-216ENST00000487485 MYL6BP14649 208 aa13.75□□□□□ -0.21
TOP3B-216ENST00000487485 EIF5P55010 431 aaKnown RBP13.75□□□□□ -0.21
TOP3B-216ENST00000487485 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
TOP3B-216ENST00000487485 NPM2Q86SE8 214 aaKnown RBP13.75□□□□□ -0.21
TOP3B-216ENST00000487485 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
TOP3B-216ENST00000487485 CHMP4AQ9BY43 222 aa13.75□□□□□ -0.21
TOP3B-216ENST00000487485 MKRN1Q9UHC7 482 aaKnown RBP13.75□□□□□ -0.21
TOP3B-216ENST00000487485 ZNF330Q9Y3S2 320 aaPredicted RBP13.75□□□□□ -0.21
TOP3B-216ENST00000487485 NRXN2Q9P2S2 1712 aa13.75□□□□□ -0.21
TOP3B-216ENST00000487485 C21orf2O43822 256 aa13.74□□□□□ -0.21
TOP3B-216ENST00000487485 PDIA6Q15084 440 aa13.74□□□□□ -0.21
TOP3B-216ENST00000487485 ERFEQ4G0M1 354 aa13.74□□□□□ -0.21
TOP3B-216ENST00000487485 CCDC30Q5VVM6 783 aa13.74□□□□□ -0.21
TOP3B-216ENST00000487485 CCDC24Q8N4L8 307 aa13.74□□□□□ -0.21
TOP3B-216ENST00000487485 DBF4Q9UBU7 674 aaPredicted RBP13.74□□□□□ -0.21
TOP3B-216ENST00000487485 CACNA1FO60840 1977 aa13.74□□□□□ -0.21
TOP3B-216ENST00000487485 ANXA1P04083 346 aa13.73□□□□□ -0.21
TOP3B-216ENST00000487485 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
TOP3B-216ENST00000487485 POTEJP0CG39 1038 aa13.73□□□□□ -0.21
TOP3B-216ENST00000487485 PROSER3Q2NL68 480 aa13.73□□□□□ -0.21
TOP3B-216ENST00000487485 TBC1D9BQ66K14 1250 aa13.73□□□□□ -0.21
TOP3B-216ENST00000487485 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
TOP3B-216ENST00000487485 DDX21Q9NR30 783 aaKnown RBP eCLIP13.73□□□□□ -0.21
TOP3B-216ENST00000487485 CREBZFQ9NS37 354 aa13.73□□□□□ -0.21
TOP3B-216ENST00000487485 CHPF2Q9P2E5 772 aa13.73□□□□□ -0.21
TOP3B-216ENST00000487485 DLEC1Q9Y238 1755 aa13.73□□□□□ -0.21
TOP3B-216ENST00000487485 A0A087WZG4 1122 aa13.72□□□□□ -0.21
TOP3B-216ENST00000487485 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
TOP3B-216ENST00000487485 DDNO94850 711 aaPredicted RBP13.72□□□□□ -0.21
TOP3B-216ENST00000487485 TBC1D2BQ9UPU7 963 aa13.72□□□□□ -0.21
TOP3B-216ENST00000487485 TIAM2Q8IVF5 1701 aa13.72□□□□□ -0.21
TOP3B-216ENST00000487485 FOXN1O15353 648 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms