RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 ANKRD31Q8N7Z5 1873 aa13.39□□□□□ -0.27
RNF220-215ENST00000487332 COL11A2P13942 1736 aaPredicted RBP13.39□□□□□ -0.27
RNF220-215ENST00000487332 A0A0G2JLW4 131 aa13.38□□□□□ -0.27
RNF220-215ENST00000487332 PRR5LQ6MZQ0 368 aa13.38□□□□□ -0.27
RNF220-215ENST00000487332 KIF6Q6ZMV9 814 aa13.38□□□□□ -0.27
RNF220-215ENST00000487332 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
RNF220-215ENST00000487332 PIM2Q9P1W9 311 aa13.38□□□□□ -0.27
RNF220-215ENST00000487332 IL16Q14005 1332 aa13.38□□□□□ -0.27
RNF220-215ENST00000487332 ARFGEF2Q9Y6D5 1785 aa13.37□□□□□ -0.27
RNF220-215ENST00000487332 PDE6BP35913 854 aa13.37□□□□□ -0.27
RNF220-215ENST00000487332 ST5P78524 1137 aa13.37□□□□□ -0.27
RNF220-215ENST00000487332 PDIA6Q15084 440 aa13.37□□□□□ -0.27
RNF220-215ENST00000487332 NGEFQ8N5V2 710 aa13.37□□□□□ -0.27
RNF220-215ENST00000487332 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
RNF220-215ENST00000487332 DALRD3Q5D0E6 543 aaKnown RBP13.36□□□□□ -0.27
RNF220-215ENST00000487332 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
RNF220-215ENST00000487332 CHMP4AQ9BY43 222 aa13.36□□□□□ -0.27
RNF220-215ENST00000487332 DDX21Q9NR30 783 aaKnown RBP eCLIP13.36□□□□□ -0.27
RNF220-215ENST00000487332 BCS1LQ9Y276 419 aa13.36□□□□□ -0.27
RNF220-215ENST00000487332 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
RNF220-215ENST00000487332 GIGYF2Q6Y7W6 1299 aaKnown RBP13.35□□□□□ -0.27
RNF220-215ENST00000487332 NYXQ9GZU5 481 aa13.35□□□□□ -0.27
RNF220-215ENST00000487332 NIP7Q9Y221 180 aaKnown RBP eCLIP13.35□□□□□ -0.27
RNF220-215ENST00000487332 UTRNP46939 3433 aa13.35□□□□□ -0.27
RNF220-215ENST00000487332 RNF123Q5XPI4 1314 aa13.35□□□□□ -0.27
RNF220-215ENST00000487332 KLRG2A4D1S0 409 aaPredicted RBP13.34□□□□□ -0.27
RNF220-215ENST00000487332 H0YIN7 160 aa13.34□□□□□ -0.27
RNF220-215ENST00000487332 MYL6BP14649 208 aa13.34□□□□□ -0.27
RNF220-215ENST00000487332 CHRNA5P30532 468 aa13.34□□□□□ -0.27
RNF220-215ENST00000487332 HLFQ16534 295 aa13.34□□□□□ -0.27
RNF220-215ENST00000487332 HDGFL1Q5TGJ6 251 aa13.34□□□□□ -0.27
RNF220-215ENST00000487332 TTLL7Q6ZT98 887 aa13.34□□□□□ -0.27
RNF220-215ENST00000487332 NBPF5PQ86XG9 351 aaPredicted RBP13.34□□□□□ -0.27
RNF220-215ENST00000487332 WWC1Q8IX03 1113 aa13.34□□□□□ -0.27
RNF220-215ENST00000487332 ZNF784Q8NCA9 323 aaPredicted RBP13.34□□□□□ -0.27
RNF220-215ENST00000487332 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
RNF220-215ENST00000487332 LAS1LQ9Y4W2 734 aaKnown RBP13.34□□□□□ -0.27
RNF220-215ENST00000487332 NUP98P52948 1817 aa13.34□□□□□ -0.27
RNF220-215ENST00000487332 EIF2S2P20042 333 aaKnown RBP13.33□□□□□ -0.28
RNF220-215ENST00000487332 KRT24Q2M2I5 525 aa13.33□□□□□ -0.28
RNF220-215ENST00000487332 PARP10Q53GL7 1025 aa13.33□□□□□ -0.28
RNF220-215ENST00000487332 HSP90AB3PQ58FF7 597 aa13.33□□□□□ -0.28
RNF220-215ENST00000487332 TPTE2Q6XPS3 522 aa13.33□□□□□ -0.28
RNF220-215ENST00000487332 C2CD5Q86YS7 1000 aa13.33□□□□□ -0.28
RNF220-215ENST00000487332 ZNF34Q8IZ26 560 aa13.33□□□□□ -0.28
RNF220-215ENST00000487332 TNRC6CQ9HCJ0 1690 aaKnown RBP13.33□□□□□ -0.28
RNF220-215ENST00000487332 GOLGB1Q14789 3259 aaKnown RBP13.33□□□□□ -0.28
RNF220-215ENST00000487332 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
RNF220-215ENST00000487332 DUSP27Q5VZP5 1158 aa13.32□□□□□ -0.28
RNF220-215ENST00000487332 STYK1Q6J9G0 422 aa13.32□□□□□ -0.28
RNF220-215ENST00000487332 TTLL6Q8N841 843 aa13.32□□□□□ -0.28
RNF220-215ENST00000487332 UBN2Q6ZU65 1347 aa13.32□□□□□ -0.28
RNF220-215ENST00000487332 NPHP1O15259 732 aa13.31□□□□□ -0.28
RNF220-215ENST00000487332 SRGNP10124 158 aa13.31□□□□□ -0.28
RNF220-215ENST00000487332 WDR63Q8IWG1 891 aa13.31□□□□□ -0.28
RNF220-215ENST00000487332 MASTLQ96GX5 879 aa13.31□□□□□ -0.28
RNF220-215ENST00000487332 ZBTB3Q9H5J0 574 aa13.31□□□□□ -0.28
RNF220-215ENST00000487332 HYPKQ9NX55 129 aa13.31□□□□□ -0.28
RNF220-215ENST00000487332 CHPF2Q9P2E5 772 aa13.31□□□□□ -0.28
RNF220-215ENST00000487332 ZC3H4Q9UPT8 1303 aaKnown RBP13.31□□□□□ -0.28
RNF220-215ENST00000487332 ABCC12Q96J65 1359 aa13.31□□□□□ -0.28
RNF220-215ENST00000487332 NTSR2O95665 410 aa13.3□□□□□ -0.28
RNF220-215ENST00000487332 COPS6Q7L5N1 327 aa13.3□□□□□ -0.28
RNF220-215ENST00000487332 CNKSR1Q969H4 720 aa13.3□□□□□ -0.28
RNF220-215ENST00000487332 CRY2Q49AN0 593 aa13.29□□□□□ -0.28
RNF220-215ENST00000487332 SOGA3Q5TF21 947 aa13.29□□□□□ -0.28
RNF220-215ENST00000487332 PPP1R42Q7Z4L9 355 aa13.29□□□□□ -0.28
RNF220-215ENST00000487332 PLBD2Q8NHP8 589 aa13.29□□□□□ -0.28
RNF220-215ENST00000487332 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
RNF220-215ENST00000487332 WWC3Q9ULE0 1092 aa13.29□□□□□ -0.28
RNF220-215ENST00000487332 LTBP3Q9NS15 1303 aa13.29□□□□□ -0.28
RNF220-215ENST00000487332 ANXA1P04083 346 aa13.28□□□□□ -0.28
RNF220-215ENST00000487332 NPR1P16066 1061 aa13.28□□□□□ -0.28
RNF220-215ENST00000487332 CCDC30Q5VVM6 783 aa13.28□□□□□ -0.28
RNF220-215ENST00000487332 ARHGAP27Q6ZUM4 889 aa13.28□□□□□ -0.28
RNF220-215ENST00000487332 CCER2I3L3R5 266 aa13.27□□□□□ -0.29
RNF220-215ENST00000487332 TCIRG1Q13488 830 aa13.27□□□□□ -0.29
RNF220-215ENST00000487332 SUSD4Q5VX71 490 aa13.27□□□□□ -0.29
RNF220-215ENST00000487332 C8orf58Q8NAV2 365 aa13.27□□□□□ -0.29
RNF220-215ENST00000487332 NECTIN2Q92692 538 aa13.27□□□□□ -0.29
RNF220-215ENST00000487332 ZNF521Q96K83 1311 aa13.27□□□□□ -0.29
RNF220-215ENST00000487332 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.29
RNF220-215ENST00000487332 LAMB2P55268 1798 aa13.27□□□□□ -0.29
RNF220-215ENST00000487332 FER1L6Q2WGJ9 1857 aa13.26□□□□□ -0.29
RNF220-215ENST00000487332 PRPF40BQ6NWY9 871 aaKnown RBP13.26□□□□□ -0.29
RNF220-215ENST00000487332 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
RNF220-215ENST00000487332 NLRP10Q86W26 655 aa13.26□□□□□ -0.29
RNF220-215ENST00000487332 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
RNF220-215ENST00000487332 ZNF622Q969S3 477 aaKnown RBP eCLIP13.26□□□□□ -0.29
RNF220-215ENST00000487332 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
RNF220-215ENST00000487332 GPTP24298 496 aa13.25□□□□□ -0.29
RNF220-215ENST00000487332 GTF2E1P29083 439 aaPredicted RBP13.25□□□□□ -0.29
RNF220-215ENST00000487332 ALDH1B1P30837 517 aa13.25□□□□□ -0.29
RNF220-215ENST00000487332 HOXA10P31260 410 aaPredicted RBP13.25□□□□□ -0.29
RNF220-215ENST00000487332 AIMP1Q12904 312 aaKnown RBP13.25□□□□□ -0.29
RNF220-215ENST00000487332 TRIM28Q13263 835 aaKnown RBP13.25□□□□□ -0.29
RNF220-215ENST00000487332 ERFEQ4G0M1 354 aa13.25□□□□□ -0.29
RNF220-215ENST00000487332 SLC10A5Q5PT55 438 aa13.25□□□□□ -0.29
RNF220-215ENST00000487332 FAM9BQ8IZU0 186 aa13.25□□□□□ -0.29
RNF220-215ENST00000487332 CCDC24Q8N4L8 307 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms