RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ADAMTS8Q9UP79 889 aa25.07■■□□□ 1.6
CLIP2-206ENST00000487091 NBPF5PQ86XG9 351 aaPredicted RBP25.06■■□□□ 1.6
CLIP2-206ENST00000487091 CCDC24Q8N4L8 307 aa25.06■■□□□ 1.6
CLIP2-206ENST00000487091 SBF1O95248 1867 aa25.06■■□□□ 1.6
CLIP2-206ENST00000487091 ERBB4Q15303 1308 aa25.06■■□□□ 1.6
CLIP2-206ENST00000487091 ERVV-1B6SEH8 477 aa25.05■■□□□ 1.6
CLIP2-206ENST00000487091 ZNF622Q969S3 477 aaKnown RBP eCLIP25.05■■□□□ 1.6
CLIP2-206ENST00000487091 NIP7Q9Y221 180 aaKnown RBP eCLIP25.05■■□□□ 1.6
CLIP2-206ENST00000487091 RRP7AQ9Y3A4 280 aaKnown RBP25.05■■□□□ 1.6
CLIP2-206ENST00000487091 NEUROD2Q15784 382 aa25.04■■□□□ 1.6
CLIP2-206ENST00000487091 KIF3CO14782 793 aa25.03■■□□□ 1.6
CLIP2-206ENST00000487091 HLFQ16534 295 aa25.03■■□□□ 1.6
CLIP2-206ENST00000487091 TPTE2Q6XPS3 522 aa25.03■■□□□ 1.6
CLIP2-206ENST00000487091 RNF181Q9P0P0 153 aa25.03■■□□□ 1.6
CLIP2-206ENST00000487091 SENP3-EIF4A1A0A087X0R7 540 aa25.02■■□□□ 1.6
CLIP2-206ENST00000487091 SRGNP10124 158 aa25.02■■□□□ 1.6
CLIP2-206ENST00000487091 STYK1Q6J9G0 422 aa25.02■■□□□ 1.6
CLIP2-206ENST00000487091 NGEFQ8N5V2 710 aa25.02■■□□□ 1.6
CLIP2-206ENST00000487091 TRIM35Q9UPQ4 493 aa25.02■■□□□ 1.6
CLIP2-206ENST00000487091 MAP3K15Q6ZN16 1313 aa25.02■■□□□ 1.6
CLIP2-206ENST00000487091 COL11A2P13942 1736 aaPredicted RBP25.01■■□□□ 1.59
CLIP2-206ENST00000487091 KIF6Q6ZMV9 814 aa25.01■■□□□ 1.59
CLIP2-206ENST00000487091 CNKSR1Q969H4 720 aa25.01■■□□□ 1.59
CLIP2-206ENST00000487091 CHL1O00533 1208 aa25■■□□□ 1.59
CLIP2-206ENST00000487091 MYL6BP14649 208 aa25■■□□□ 1.59
CLIP2-206ENST00000487091 MASTLQ96GX5 879 aa25■■□□□ 1.59
CLIP2-206ENST00000487091 LMNB1P20700 586 aa24.99■■□□□ 1.59
CLIP2-206ENST00000487091 NUP98P52948 1817 aa24.99■■□□□ 1.59
CLIP2-206ENST00000487091 RASSF7Q02833 373 aa24.99■■□□□ 1.59
CLIP2-206ENST00000487091 TTLL7Q6ZT98 887 aa24.99■■□□□ 1.59
CLIP2-206ENST00000487091 ZC3H4Q9UPT8 1303 aaKnown RBP24.99■■□□□ 1.59
CLIP2-206ENST00000487091 KLRG2A4D1S0 409 aaPredicted RBP24.98■■□□□ 1.59
CLIP2-206ENST00000487091 EIF2S2P20042 333 aaKnown RBP24.97■■□□□ 1.59
CLIP2-206ENST00000487091 NFKBIEO00221 500 aa24.96■■□□□ 1.59
CLIP2-206ENST00000487091 C21orf2O43822 256 aa24.96■■□□□ 1.59
CLIP2-206ENST00000487091 PDIA6Q15084 440 aa24.96■■□□□ 1.59
CLIP2-206ENST00000487091 LRP10Q7Z4F1 713 aa24.96■■□□□ 1.59
CLIP2-206ENST00000487091 NYXQ9GZU5 481 aa24.96■■□□□ 1.59
CLIP2-206ENST00000487091 KDM2BQ8NHM5 1336 aa24.95■■□□□ 1.58
CLIP2-206ENST00000487091 FAM177BA6PVY3 158 aa24.95■■□□□ 1.58
CLIP2-206ENST00000487091 SLX4Q8IY92 1834 aa24.94■■□□□ 1.58
CLIP2-206ENST00000487091 NPR1P16066 1061 aa24.94■■□□□ 1.58
CLIP2-206ENST00000487091 GTF2E1P29083 439 aaPredicted RBP24.94■■□□□ 1.58
CLIP2-206ENST00000487091 PRELPP51888 382 aa24.94■■□□□ 1.58
CLIP2-206ENST00000487091 PRPF40BQ6NWY9 871 aaKnown RBP24.94■■□□□ 1.58
CLIP2-206ENST00000487091 GIGYF2Q6Y7W6 1299 aaKnown RBP24.94■■□□□ 1.58
CLIP2-206ENST00000487091 ZBTB3Q9H5J0 574 aa24.94■■□□□ 1.58
CLIP2-206ENST00000487091 NMRK2Q9NPI5 230 aa24.94■■□□□ 1.58
CLIP2-206ENST00000487091 CCDC88AQ3V6T2 1871 aa24.94■■□□□ 1.58
CLIP2-206ENST00000487091 ARFGEF2Q9Y6D5 1785 aa24.93■■□□□ 1.58
CLIP2-206ENST00000487091 SOGA3Q5TF21 947 aa24.93■■□□□ 1.58
CLIP2-206ENST00000487091 LAS1LQ9Y4W2 734 aaKnown RBP24.93■■□□□ 1.58
CLIP2-206ENST00000487091 FER1L6Q2WGJ9 1857 aa24.93■■□□□ 1.58
CLIP2-206ENST00000487091 TOMM70O94826 608 aa24.92■■□□□ 1.58
CLIP2-206ENST00000487091 ZNF34Q8IZ26 560 aa24.92■■□□□ 1.58
CLIP2-206ENST00000487091 CFAP44Q96MT7 982 aa24.92■■□□□ 1.58
CLIP2-206ENST00000487091 ZNF219Q9P2Y4 722 aaPredicted RBP24.92■■□□□ 1.58
CLIP2-206ENST00000487091 IBTKQ9P2D0 1353 aaPredicted RBP24.92■■□□□ 1.58
CLIP2-206ENST00000487091 LTBP3Q9NS15 1303 aa24.91■■□□□ 1.58
CLIP2-206ENST00000487091 CACNA1SQ13698 1873 aa24.9■■□□□ 1.58
CLIP2-206ENST00000487091 APAF1O14727 1248 aa24.9■■□□□ 1.58
CLIP2-206ENST00000487091 HOXB7P09629 217 aa24.9■■□□□ 1.58
CLIP2-206ENST00000487091 PROSER3Q2NL68 480 aa24.9■■□□□ 1.58
CLIP2-206ENST00000487091 C7orf43Q8WVR3 580 aa24.9■■□□□ 1.58
CLIP2-206ENST00000487091 UBN2Q6ZU65 1347 aa24.89■■□□□ 1.58
CLIP2-206ENST00000487091 GPTP24298 496 aa24.89■■□□□ 1.58
CLIP2-206ENST00000487091 KRT24Q2M2I5 525 aa24.89■■□□□ 1.58
CLIP2-206ENST00000487091 DDX21Q9NR30 783 aaKnown RBP eCLIP24.89■■□□□ 1.58
CLIP2-206ENST00000487091 GLTPD2A6NH11 291 aa24.88■■□□□ 1.57
CLIP2-206ENST00000487091 ANXA1P04083 346 aa24.88■■□□□ 1.57
CLIP2-206ENST00000487091 HSPA6P17066 643 aa24.88■■□□□ 1.57
CLIP2-206ENST00000487091 ALDH1B1P30837 517 aa24.88■■□□□ 1.57
CLIP2-206ENST00000487091 SUSD4Q5VX71 490 aa24.88■■□□□ 1.57
CLIP2-206ENST00000487091 NUTM1Q86Y26 1132 aa24.88■■□□□ 1.57
CLIP2-206ENST00000487091 TAOK3Q9H2K8 898 aa24.88■■□□□ 1.57
CLIP2-206ENST00000487091 RIC1Q4ADV7 1423 aa24.87■■□□□ 1.57
CLIP2-206ENST00000487091 DICER1Q9UPY3 1922 aaKnown RBP24.87■■□□□ 1.57
CLIP2-206ENST00000487091 ZNF316A6NFI3 1004 aaPredicted RBP24.87■■□□□ 1.57
CLIP2-206ENST00000487091 CRY2Q49AN0 593 aa24.87■■□□□ 1.57
CLIP2-206ENST00000487091 ERFEQ4G0M1 354 aa24.87■■□□□ 1.57
CLIP2-206ENST00000487091 PARP10Q53GL7 1025 aa24.87■■□□□ 1.57
CLIP2-206ENST00000487091 COPS6Q7L5N1 327 aa24.87■■□□□ 1.57
CLIP2-206ENST00000487091 PPP1R42Q7Z4L9 355 aa24.87■■□□□ 1.57
CLIP2-206ENST00000487091 NECTIN2Q92692 538 aa24.87■■□□□ 1.57
CLIP2-206ENST00000487091 ABCC12Q96J65 1359 aa24.87■■□□□ 1.57
CLIP2-206ENST00000487091 ZNF853P0CG23 659 aa24.86■■□□□ 1.57
CLIP2-206ENST00000487091 CALD1Q05682 793 aaKnown RBP24.86■■□□□ 1.57
CLIP2-206ENST00000487091 CCDC93Q567U6 631 aa24.86■■□□□ 1.57
CLIP2-206ENST00000487091 TNRC6CQ9HCJ0 1690 aaKnown RBP24.85■■□□□ 1.57
CLIP2-206ENST00000487091 NTSR2O95665 410 aa24.85■■□□□ 1.57
CLIP2-206ENST00000487091 C16orf71Q8IYS4 520 aaPredicted RBP24.85■■□□□ 1.57
CLIP2-206ENST00000487091 RBM46Q8TBY0 533 aaKnown RBP24.85■■□□□ 1.57
CLIP2-206ENST00000487091 XAGE3Q8WTP9 111 aa24.85■■□□□ 1.57
CLIP2-206ENST00000487091 RRAGCQ9HB90 399 aa24.85■■□□□ 1.57
CLIP2-206ENST00000487091 TIAM2Q8IVF5 1701 aa24.84■■□□□ 1.57
CLIP2-206ENST00000487091 HSP90AB3PQ58FF7 597 aa24.84■■□□□ 1.57
CLIP2-206ENST00000487091 HDGFL1Q5TGJ6 251 aa24.84■■□□□ 1.57
CLIP2-206ENST00000487091 MBIPQ9NS73 344 aa24.84■■□□□ 1.57
CLIP2-206ENST00000487091 IFT57Q9NWB7 429 aa24.84■■□□□ 1.57
CLIP2-206ENST00000487091 AIMP1Q12904 312 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms