RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
SMARCAL1-212ENST00000486983 ZNF385CQ66K41 422 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-212ENST00000486983 GGT6Q6P531 493 aa9.36□□□□□ -0.91
SMARCAL1-212ENST00000486983 PARP9Q8IXQ6 854 aa9.36□□□□□ -0.91
SMARCAL1-212ENST00000486983 COL25A1Q9BXS0 654 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-212ENST00000486983 SLC52A1Q9NWF4 448 aa9.36□□□□□ -0.91
SMARCAL1-212ENST00000486983 YEATS2Q9ULM3 1422 aa9.36□□□□□ -0.91
SMARCAL1-212ENST00000486983 PREX1Q8TCU6 1659 aa9.36□□□□□ -0.91
SMARCAL1-212ENST00000486983 ZMYND10O75800 440 aa9.35□□□□□ -0.91
SMARCAL1-212ENST00000486983 RAPGEF3O95398 923 aa9.35□□□□□ -0.91
SMARCAL1-212ENST00000486983 IRX6P78412 446 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-212ENST00000486983 CNGB1Q14028 1251 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-212ENST00000486983 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
SMARCAL1-212ENST00000486983 VASH1Q7L8A9 365 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-212ENST00000486983 RIC3Q7Z5B4 369 aa9.35□□□□□ -0.91
SMARCAL1-212ENST00000486983 TRMT44Q8IYL2 757 aaKnown RBP9.35□□□□□ -0.91
SMARCAL1-212ENST00000486983 EMILIN1Q9Y6C2 1016 aa9.35□□□□□ -0.91
SMARCAL1-212ENST00000486983 NINLQ9Y2I6 1382 aa9.35□□□□□ -0.91
SMARCAL1-212ENST00000486983 TMEM131LA2VDJ0 1609 aa9.34□□□□□ -0.91
SMARCAL1-212ENST00000486983 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
SMARCAL1-212ENST00000486983 CCDC116Q8IYX3 515 aa9.34□□□□□ -0.91
SMARCAL1-212ENST00000486983 NGEFQ8N5V2 710 aa9.34□□□□□ -0.91
SMARCAL1-212ENST00000486983 TSC1Q92574 1164 aa9.34□□□□□ -0.91
SMARCAL1-212ENST00000486983 ARHGEF28Q8N1W1 1705 aaKnown RBP9.34□□□□□ -0.92
SMARCAL1-212ENST00000486983 MAGEB6P1A0A0J9YX57 407 aa9.33□□□□□ -0.92
SMARCAL1-212ENST00000486983 RRP1P56182 461 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-212ENST00000486983 SVOPQ8N4V2 548 aa9.33□□□□□ -0.92
SMARCAL1-212ENST00000486983 NANOS1Q8WY41 292 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-212ENST00000486983 RBM19Q9Y4C8 960 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-212ENST00000486983 NSD2O96028 1365 aa9.33□□□□□ -0.92
SMARCAL1-212ENST00000486983 FIGNL2A6NMB9 653 aa9.32□□□□□ -0.92
SMARCAL1-212ENST00000486983 WDR43Q15061 677 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMARCAL1-212ENST00000486983 QPCTQ16769 361 aa9.32□□□□□ -0.92
SMARCAL1-212ENST00000486983 NBPF14Q5TI25 921 aa9.32□□□□□ -0.92
SMARCAL1-212ENST00000486983 CCDC155Q8N6L0 562 aa9.32□□□□□ -0.92
SMARCAL1-212ENST00000486983 ARMC2Q8NEN0 867 aa9.32□□□□□ -0.92
SMARCAL1-212ENST00000486983 RCAN3Q9UKA8 241 aa9.32□□□□□ -0.92
SMARCAL1-212ENST00000486983 POLR3AO14802 1390 aaPredicted RBP9.32□□□□□ -0.92
SMARCAL1-212ENST00000486983 ZNF521Q96K83 1311 aa9.31□□□□□ -0.92
SMARCAL1-212ENST00000486983 TULP4Q9NRJ4 1543 aa9.31□□□□□ -0.92
SMARCAL1-212ENST00000486983 CBLBQ13191 982 aa9.31□□□□□ -0.92
SMARCAL1-212ENST00000486983 WHAMMQ8TF30 809 aa9.31□□□□□ -0.92
SMARCAL1-212ENST00000486983 LIMD1Q9UGP4 676 aa9.31□□□□□ -0.92
SMARCAL1-212ENST00000486983 SPATA31D1Q6ZQQ2 1576 aa9.31□□□□□ -0.92
SMARCAL1-212ENST00000486983 ARHGEF40Q8TER5 1519 aa9.31□□□□□ -0.92
SMARCAL1-212ENST00000486983 FANCIQ9NVI1 1328 aa9.31□□□□□ -0.92
SMARCAL1-212ENST00000486983 CLTCQ00610 1675 aaKnown RBP9.3□□□□□ -0.92
SMARCAL1-212ENST00000486983 ANKRD36BQ8N2N9 1353 aa9.3□□□□□ -0.92
SMARCAL1-212ENST00000486983 CARD14Q9BXL6 1004 aa9.3□□□□□ -0.92
SMARCAL1-212ENST00000486983 NSD3Q9BZ95 1437 aa9.3□□□□□ -0.92
SMARCAL1-212ENST00000486983 SPINT1O43278 529 aa9.29□□□□□ -0.92
SMARCAL1-212ENST00000486983 PPP1R26Q5T8A7 1209 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-212ENST00000486983 Q6ZVU0 165 aa9.29□□□□□ -0.92
SMARCAL1-212ENST00000486983 EVC2Q86UK5 1308 aa9.29□□□□□ -0.92
SMARCAL1-212ENST00000486983 PTPRMP28827 1452 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 PLEKHH1Q9ULM0 1364 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 DLC1Q96QB1 1528 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 SLC35F4A4IF30 521 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 ARHGEF15O94989 841 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 SLURP2P0DP57 97 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 IRS1P35568 1242 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 IDI1Q13907 227 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 ERFEQ4G0M1 354 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 B4GALNT3Q6L9W6 998 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 ZC3H15Q8WU90 426 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 CCDC136Q96JN2 1154 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 MED14O60244 1454 aa9.28□□□□□ -0.92
SMARCAL1-212ENST00000486983 NUTM2BA6NNL0 878 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-212ENST00000486983 NUTM2EB1AL46 878 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-212ENST00000486983 NUTM2DQ5VT03 806 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-212ENST00000486983 MYSM1Q5VVJ2 828 aa9.27□□□□□ -0.93
SMARCAL1-212ENST00000486983 GPAT2Q6NUI2 795 aa9.27□□□□□ -0.93
SMARCAL1-212ENST00000486983 NUTM2AQ8IVF1 878 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-212ENST00000486983 VSIG10Q8N0Z9 540 aa9.27□□□□□ -0.93
SMARCAL1-212ENST00000486983 TRAK1Q9UPV9 953 aa9.27□□□□□ -0.93
SMARCAL1-212ENST00000486983 DNMT3AQ9Y6K1 912 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-212ENST00000486983 CGNL1Q0VF96 1302 aa9.27□□□□□ -0.93
SMARCAL1-212ENST00000486983 SHPRHQ149N8 1683 aa9.26□□□□□ -0.93
SMARCAL1-212ENST00000486983 ATAD2Q6PL18 1390 aa9.26□□□□□ -0.93
SMARCAL1-212ENST00000486983 LILRB3O75022 631 aa9.26□□□□□ -0.93
SMARCAL1-212ENST00000486983 ITGA6P23229 1130 aa9.26□□□□□ -0.93
SMARCAL1-212ENST00000486983 VWA5B2Q8N398 1253 aa9.26□□□□□ -0.93
SMARCAL1-212ENST00000486983 IQSEC2Q5JU85 1478 aa9.26□□□□□ -0.93
SMARCAL1-212ENST00000486983 ABCC11Q96J66 1382 aa9.25□□□□□ -0.93
SMARCAL1-212ENST00000486983 YTHDC2Q9H6S0 1430 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-212ENST00000486983 ALKQ9UM73 1620 aa9.25□□□□□ -0.93
SMARCAL1-212ENST00000486983 CDC14CA4D256 554 aa9.25□□□□□ -0.93
SMARCAL1-212ENST00000486983 TRIM66O15016 1216 aa9.25□□□□□ -0.93
SMARCAL1-212ENST00000486983 DUSP27Q5VZP5 1158 aa9.25□□□□□ -0.93
SMARCAL1-212ENST00000486983 TRMT2AQ8IZ69 625 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-212ENST00000486983 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
SMARCAL1-212ENST00000486983 A2ML1A8K2U0 1454 aa9.25□□□□□ -0.93
SMARCAL1-212ENST00000486983 NKTRP30414 1462 aaKnown RBP9.24□□□□□ -0.93
SMARCAL1-212ENST00000486983 CTSOP43234 321 aaPredicted RBP9.24□□□□□ -0.93
SMARCAL1-212ENST00000486983 TUSC1Q2TAM9 212 aa9.24□□□□□ -0.93
SMARCAL1-212ENST00000486983 HELBQ8NG08 1087 aaPredicted RBP9.24□□□□□ -0.93
SMARCAL1-212ENST00000486983 SLFN5Q08AF3 891 aa9.23□□□□□ -0.93
SMARCAL1-212ENST00000486983 RTL5Q5HYW3 569 aaPredicted RBP9.23□□□□□ -0.93
SMARCAL1-212ENST00000486983 TMEM132EQ6IEE7 984 aa9.23□□□□□ -0.93
SMARCAL1-212ENST00000486983 GPKOWQ92917 476 aaPredicted RBP eCLIP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms