RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 SERPINB2P05120 415 aa8.78□□□□□ -1
CTDSPL-208ENST00000486978 IFNL2Q8IZJ0 200 aa8.78□□□□□ -1
CTDSPL-208ENST00000486978 ZIC5Q96T25 663 aa8.78□□□□□ -1
CTDSPL-208ENST00000486978 EYA1Q99502 592 aa8.78□□□□□ -1
CTDSPL-208ENST00000486978 POLKQ9UBT6 870 aa8.78□□□□□ -1
CTDSPL-208ENST00000486978 ABT1Q9ULW3 272 aaKnown RBP8.78□□□□□ -1
CTDSPL-208ENST00000486978 SPG7Q9UQ90 795 aa8.78□□□□□ -1
CTDSPL-208ENST00000486978 COL6A3P12111 3177 aa8.77□□□□□ -1
CTDSPL-208ENST00000486978 H0YIN7 160 aa8.77□□□□□ -1.01
CTDSPL-208ENST00000486978 TNNT2P45379 298 aaPredicted RBP8.77□□□□□ -1.01
CTDSPL-208ENST00000486978 ZNF622Q969S3 477 aaKnown RBP eCLIP8.77□□□□□ -1.01
CTDSPL-208ENST00000486978 DDX21Q9NR30 783 aaKnown RBP eCLIP8.77□□□□□ -1.01
CTDSPL-208ENST00000486978 KNSTRNQ9Y448 316 aa8.77□□□□□ -1.01
CTDSPL-208ENST00000486978 ARFGEF2Q9Y6D5 1785 aa8.76□□□□□ -1.01
CTDSPL-208ENST00000486978 TRAF5O00463 557 aa8.76□□□□□ -1.01
CTDSPL-208ENST00000486978 EPHX2P34913 555 aa8.76□□□□□ -1.01
CTDSPL-208ENST00000486978 OLFM4Q6UX06 510 aa8.76□□□□□ -1.01
CTDSPL-208ENST00000486978 BRCA2P51587 3418 aa8.76□□□□□ -1.01
CTDSPL-208ENST00000486978 ERVV-2B6SEH9 535 aa8.75□□□□□ -1.01
CTDSPL-208ENST00000486978 PAXIP1Q6ZW49 1069 aaPredicted RBP8.75□□□□□ -1.01
CTDSPL-208ENST00000486978 MORC1Q86VD1 984 aa8.75□□□□□ -1.01
CTDSPL-208ENST00000486978 SOS1Q07889 1333 aaPredicted RBP8.75□□□□□ -1.01
CTDSPL-208ENST00000486978 RNF123Q5XPI4 1314 aa8.75□□□□□ -1.01
CTDSPL-208ENST00000486978 LTBP3Q9NS15 1303 aa8.75□□□□□ -1.01
CTDSPL-208ENST00000486978 IQCA1LA6NCM1 817 aa8.74□□□□□ -1.01
CTDSPL-208ENST00000486978 EIF4A2Q14240 407 aaKnown RBP8.74□□□□□ -1.01
CTDSPL-208ENST00000486978 AMER1Q5JTC6 1135 aaPredicted RBP8.74□□□□□ -1.01
CTDSPL-208ENST00000486978 DNAJC10Q8IXB1 793 aa8.74□□□□□ -1.01
CTDSPL-208ENST00000486978 TAOK3Q9H2K8 898 aa8.74□□□□□ -1.01
CTDSPL-208ENST00000486978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.74□□□□□ -1.01
CTDSPL-208ENST00000486978 NARFQ9UHQ1 456 aa8.74□□□□□ -1.01
CTDSPL-208ENST00000486978 HACL1Q9UJ83 578 aa8.74□□□□□ -1.01
CTDSPL-208ENST00000486978 HTTP42858 3142 aa8.74□□□□□ -1.01
CTDSPL-208ENST00000486978 SCN11AQ9UI33 1791 aa8.73□□□□□ -1.01
CTDSPL-208ENST00000486978 COL4A5P29400 1685 aa8.73□□□□□ -1.01
CTDSPL-208ENST00000486978 PER1O15534 1290 aaPredicted RBP8.73□□□□□ -1.01
CTDSPL-208ENST00000486978 ZPR1O75312 459 aa8.73□□□□□ -1.01
CTDSPL-208ENST00000486978 BICDL1Q6ZP65 573 aa8.73□□□□□ -1.01
CTDSPL-208ENST00000486978 NFATC2IPQ8NCF5 419 aa8.73□□□□□ -1.01
CTDSPL-208ENST00000486978 BEGAINQ9BUH8 593 aa8.73□□□□□ -1.01
CTDSPL-208ENST00000486978 TLL2Q9Y6L7 1015 aa8.73□□□□□ -1.01
CTDSPL-208ENST00000486978 HABP4Q5JVS0 413 aaKnown RBP8.72□□□□□ -1.01
CTDSPL-208ENST00000486978 TBC1D9BQ66K14 1250 aa8.72□□□□□ -1.01
CTDSPL-208ENST00000486978 CIAPIN1Q6FI81 312 aa8.72□□□□□ -1.01
CTDSPL-208ENST00000486978 C7orf43Q8WVR3 580 aa8.72□□□□□ -1.01
CTDSPL-208ENST00000486978 ZNF277Q9NRM2 450 aaPredicted RBP8.72□□□□□ -1.01
CTDSPL-208ENST00000486978 ZBTB1Q9Y2K1 713 aa8.72□□□□□ -1.01
CTDSPL-208ENST00000486978 CYP19A1P11511 503 aaPredicted RBP8.71□□□□□ -1.02
CTDSPL-208ENST00000486978 MAP2K2P36507 400 aa8.71□□□□□ -1.02
CTDSPL-208ENST00000486978 ECE1P42892 770 aa8.71□□□□□ -1.02
CTDSPL-208ENST00000486978 CABP4P57796 275 aa8.71□□□□□ -1.02
CTDSPL-208ENST00000486978 PRR5LQ6MZQ0 368 aa8.71□□□□□ -1.02
CTDSPL-208ENST00000486978 PRPF40BQ6NWY9 871 aaKnown RBP8.71□□□□□ -1.02
CTDSPL-208ENST00000486978 SLC51AQ86UW1 340 aa8.71□□□□□ -1.02
CTDSPL-208ENST00000486978 COL15A1P39059 1388 aa8.71□□□□□ -1.02
CTDSPL-208ENST00000486978 NPC1L1Q9UHC9 1359 aa8.71□□□□□ -1.02
CTDSPL-208ENST00000486978 FZD9O00144 591 aa8.7□□□□□ -1.02
CTDSPL-208ENST00000486978 EPS15P42566 896 aa8.7□□□□□ -1.02
CTDSPL-208ENST00000486978 CC2D1BQ5T0F9 858 aaKnown RBP8.7□□□□□ -1.02
CTDSPL-208ENST00000486978 DLK2Q6UY11 383 aa8.7□□□□□ -1.02
CTDSPL-208ENST00000486978 SAPCD2Q86UD0 394 aa8.7□□□□□ -1.02
CTDSPL-208ENST00000486978 PNMA8AQ86V59 439 aaPredicted RBP8.69□□□□□ -1.02
CTDSPL-208ENST00000486978 BRIP1Q9BX63 1249 aa8.69□□□□□ -1.02
CTDSPL-208ENST00000486978 SRGNP10124 158 aa8.68□□□□□ -1.02
CTDSPL-208ENST00000486978 IL13P35225 146 aa8.68□□□□□ -1.02
CTDSPL-208ENST00000486978 MTHFSP49914 203 aa8.68□□□□□ -1.02
CTDSPL-208ENST00000486978 FXR1P51114 621 aaKnown RBP eCLIP8.68□□□□□ -1.02
CTDSPL-208ENST00000486978 SCNN1DP51172 638 aa8.68□□□□□ -1.02
CTDSPL-208ENST00000486978 BRPF1P55201 1214 aaPredicted RBP8.68□□□□□ -1.02
CTDSPL-208ENST00000486978 SLC39A6Q13433 755 aa8.68□□□□□ -1.02
CTDSPL-208ENST00000486978 BCORQ6W2J9 1755 aa8.68□□□□□ -1.02
CTDSPL-208ENST00000486978 POLR2AP24928 1970 aaKnown RBP8.67□□□□□ -1.02
CTDSPL-208ENST00000486978 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
CTDSPL-208ENST00000486978 PDE6BP35913 854 aa8.67□□□□□ -1.02
CTDSPL-208ENST00000486978 SCN7AQ01118 1682 aa8.67□□□□□ -1.02
CTDSPL-208ENST00000486978 AMOTQ4VCS5 1084 aa8.67□□□□□ -1.02
CTDSPL-208ENST00000486978 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
CTDSPL-208ENST00000486978 ZNF530Q6P9A1 599 aaPredicted RBP8.67□□□□□ -1.02
CTDSPL-208ENST00000486978 AKAP11Q9UKA4 1901 aa8.67□□□□□ -1.02
CTDSPL-208ENST00000486978 ZBTB12Q9Y330 459 aaPredicted RBP8.67□□□□□ -1.02
CTDSPL-208ENST00000486978 SNED1Q8TER0 1413 aa8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 CA12O43570 354 aa8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 HSP90AB1P08238 724 aaKnown RBP8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 FKBP4Q02790 459 aaKnown RBP eCLIP8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 CNGB1Q14028 1251 aaPredicted RBP8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 SULT6B1Q6IMI4 303 aa8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 STYK1Q6J9G0 422 aa8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 AEBP1Q8IUX7 1158 aa8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 GLIS2Q9BZE0 524 aaPredicted RBP8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 LGR6Q9HBX8 967 aa8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 GJA3Q9Y6H8 435 aa8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 RANBP2P49792 3224 aaKnown RBP8.66□□□□□ -1.02
CTDSPL-208ENST00000486978 FAM155AB1AL88 458 aaPredicted RBP8.65□□□□□ -1.02
CTDSPL-208ENST00000486978 DIAPH1O60610 1272 aaKnown RBP8.65□□□□□ -1.02
CTDSPL-208ENST00000486978 CELF2O95319 508 aaKnown RBP8.65□□□□□ -1.02
CTDSPL-208ENST00000486978 IARSP41252 1262 aaKnown RBP8.65□□□□□ -1.02
CTDSPL-208ENST00000486978 EIF5P55010 431 aaKnown RBP8.65□□□□□ -1.02
CTDSPL-208ENST00000486978 GPC2Q8N158 579 aa8.65□□□□□ -1.02
CTDSPL-208ENST00000486978 SYNE4Q8N205 404 aa8.65□□□□□ -1.02
CTDSPL-208ENST00000486978 CNKSR1Q969H4 720 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms