RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 NBPF5PQ86XG9 351 aaPredicted RBP28.8■■■□□ 2.2
HLA-F-228ENST00000486194 ZNF526Q8TF50 670 aaPredicted RBP28.8■■■□□ 2.2
HLA-F-228ENST00000486194 DLEC1Q9Y238 1755 aa28.78■■■□□ 2.2
HLA-F-228ENST00000486194 NIP7Q9Y221 180 aaKnown RBP eCLIP28.78■■■□□ 2.2
HLA-F-228ENST00000486194 ERVV-1B6SEH8 477 aa28.77■■■□□ 2.2
HLA-F-228ENST00000486194 C9orf131Q5VYM1 1079 aa28.77■■■□□ 2.2
HLA-F-228ENST00000486194 TPTE2Q6XPS3 522 aa28.77■■■□□ 2.2
HLA-F-228ENST00000486194 KIF6Q6ZMV9 814 aa28.77■■■□□ 2.2
HLA-F-228ENST00000486194 NGEFQ8N5V2 710 aa28.76■■■□□ 2.19
HLA-F-228ENST00000486194 ZNF622Q969S3 477 aaKnown RBP eCLIP28.76■■■□□ 2.19
HLA-F-228ENST00000486194 CCDC24Q8N4L8 307 aa28.75■■■□□ 2.19
HLA-F-228ENST00000486194 MAP3K15Q6ZN16 1313 aa28.74■■■□□ 2.19
HLA-F-228ENST00000486194 MYL6BP14649 208 aa28.74■■■□□ 2.19
HLA-F-228ENST00000486194 HLFQ16534 295 aa28.73■■■□□ 2.19
HLA-F-228ENST00000486194 ANKRD31Q8N7Z5 1873 aa28.73■■■□□ 2.19
HLA-F-228ENST00000486194 CNKSR1Q969H4 720 aa28.73■■■□□ 2.19
HLA-F-228ENST00000486194 RNF181Q9P0P0 153 aa28.73■■■□□ 2.19
HLA-F-228ENST00000486194 TRIM35Q9UPQ4 493 aa28.73■■■□□ 2.19
HLA-F-228ENST00000486194 CHL1O00533 1208 aa28.72■■■□□ 2.19
HLA-F-228ENST00000486194 STYK1Q6J9G0 422 aa28.72■■■□□ 2.19
HLA-F-228ENST00000486194 MASTLQ96GX5 879 aa28.71■■■□□ 2.19
HLA-F-228ENST00000486194 SRGNP10124 158 aa28.7■■■□□ 2.18
HLA-F-228ENST00000486194 EIF2S2P20042 333 aaKnown RBP28.7■■■□□ 2.18
HLA-F-228ENST00000486194 GTF2E1P29083 439 aaPredicted RBP28.7■■■□□ 2.18
HLA-F-228ENST00000486194 NYXQ9GZU5 481 aa28.7■■■□□ 2.18
HLA-F-228ENST00000486194 LAS1LQ9Y4W2 734 aaKnown RBP28.7■■■□□ 2.18
HLA-F-228ENST00000486194 TTLL7Q6ZT98 887 aa28.69■■■□□ 2.18
HLA-F-228ENST00000486194 ZNF316A6NFI3 1004 aaPredicted RBP28.68■■■□□ 2.18
HLA-F-228ENST00000486194 LMNB1P20700 586 aa28.68■■■□□ 2.18
HLA-F-228ENST00000486194 ZC3H4Q9UPT8 1303 aaKnown RBP28.68■■■□□ 2.18
HLA-F-228ENST00000486194 SENP3-EIF4A1A0A087X0R7 540 aa28.67■■■□□ 2.18
HLA-F-228ENST00000486194 FAM177BA6PVY3 158 aa28.66■■■□□ 2.18
HLA-F-228ENST00000486194 RASSF7Q02833 373 aa28.66■■■□□ 2.18
HLA-F-228ENST00000486194 CALD1Q05682 793 aaKnown RBP28.66■■■□□ 2.18
HLA-F-228ENST00000486194 SOGA3Q5TF21 947 aa28.66■■■□□ 2.18
HLA-F-228ENST00000486194 ZBTB3Q9H5J0 574 aa28.66■■■□□ 2.18
HLA-F-228ENST00000486194 COL11A2P13942 1736 aaPredicted RBP28.66■■■□□ 2.18
HLA-F-228ENST00000486194 KLRG2A4D1S0 409 aaPredicted RBP28.65■■■□□ 2.18
HLA-F-228ENST00000486194 C21orf2O43822 256 aa28.65■■■□□ 2.18
HLA-F-228ENST00000486194 NPR1P16066 1061 aa28.65■■■□□ 2.18
HLA-F-228ENST00000486194 GIGYF2Q6Y7W6 1299 aaKnown RBP28.65■■■□□ 2.18
HLA-F-228ENST00000486194 CFAP44Q96MT7 982 aa28.65■■■□□ 2.18
HLA-F-228ENST00000486194 KDM2BQ8NHM5 1336 aa28.65■■■□□ 2.18
HLA-F-228ENST00000486194 APAF1O14727 1248 aa28.64■■■□□ 2.18
HLA-F-228ENST00000486194 KIF3CO14782 793 aa28.64■■■□□ 2.18
HLA-F-228ENST00000486194 HOXB7P09629 217 aa28.64■■■□□ 2.18
HLA-F-228ENST00000486194 PDIA6Q15084 440 aa28.64■■■□□ 2.18
HLA-F-228ENST00000486194 IBTKQ9P2D0 1353 aaPredicted RBP28.63■■■□□ 2.17
HLA-F-228ENST00000486194 PRPF40BQ6NWY9 871 aaKnown RBP28.63■■■□□ 2.17
HLA-F-228ENST00000486194 NFKBIEO00221 500 aa28.62■■■□□ 2.17
HLA-F-228ENST00000486194 LRP10Q7Z4F1 713 aa28.62■■■□□ 2.17
HLA-F-228ENST00000486194 ZNF219Q9P2Y4 722 aaPredicted RBP28.62■■■□□ 2.17
HLA-F-228ENST00000486194 ZNF34Q8IZ26 560 aa28.61■■■□□ 2.17
HLA-F-228ENST00000486194 DDX21Q9NR30 783 aaKnown RBP eCLIP28.61■■■□□ 2.17
HLA-F-228ENST00000486194 NUP98P52948 1817 aa28.6■■■□□ 2.17
HLA-F-228ENST00000486194 SBF1O95248 1867 aa28.6■■■□□ 2.17
HLA-F-228ENST00000486194 GPTP24298 496 aa28.6■■■□□ 2.17
HLA-F-228ENST00000486194 PARP10Q53GL7 1025 aa28.6■■■□□ 2.17
HLA-F-228ENST00000486194 ANP32CO43423 234 aa28.59■■■□□ 2.17
HLA-F-228ENST00000486194 ALDH1B1P30837 517 aa28.59■■■□□ 2.17
HLA-F-228ENST00000486194 PROSER3Q2NL68 480 aa28.59■■■□□ 2.17
HLA-F-228ENST00000486194 PPP1R42Q7Z4L9 355 aa28.59■■■□□ 2.17
HLA-F-228ENST00000486194 NECTIN2Q92692 538 aa28.59■■■□□ 2.17
HLA-F-228ENST00000486194 LTBP3Q9NS15 1303 aa28.59■■■□□ 2.17
HLA-F-228ENST00000486194 GNAI1P63096 354 aa28.58■■■□□ 2.17
HLA-F-228ENST00000486194 KRT24Q2M2I5 525 aa28.58■■■□□ 2.17
HLA-F-228ENST00000486194 HDGFL1Q5TGJ6 251 aa28.58■■■□□ 2.17
HLA-F-228ENST00000486194 TAOK3Q9H2K8 898 aa28.58■■■□□ 2.17
HLA-F-228ENST00000486194 NMRK2Q9NPI5 230 aa28.58■■■□□ 2.17
HLA-F-228ENST00000486194 IFT57Q9NWB7 429 aa28.58■■■□□ 2.17
HLA-F-228ENST00000486194 UBN2Q6ZU65 1347 aa28.58■■■□□ 2.17
HLA-F-228ENST00000486194 TOMM70O94826 608 aa28.57■■■□□ 2.16
HLA-F-228ENST00000486194 ANXA1P04083 346 aa28.57■■■□□ 2.16
HLA-F-228ENST00000486194 HSP90AB3PQ58FF7 597 aa28.57■■■□□ 2.16
HLA-F-228ENST00000486194 COPS6Q7L5N1 327 aa28.57■■■□□ 2.16
HLA-F-228ENST00000486194 NUTM1Q86Y26 1132 aa28.57■■■□□ 2.16
HLA-F-228ENST00000486194 RIC1Q4ADV7 1423 aa28.57■■■□□ 2.16
HLA-F-228ENST00000486194 ERFEQ4G0M1 354 aa28.56■■■□□ 2.16
HLA-F-228ENST00000486194 SUSD4Q5VX71 490 aa28.56■■■□□ 2.16
HLA-F-228ENST00000486194 MBIPQ9NS73 344 aa28.56■■■□□ 2.16
HLA-F-228ENST00000486194 ARFGEF2Q9Y6D5 1785 aa28.56■■■□□ 2.16
HLA-F-228ENST00000486194 ZNF853P0CG23 659 aa28.55■■■□□ 2.16
HLA-F-228ENST00000486194 PRELPP51888 382 aa28.55■■■□□ 2.16
HLA-F-228ENST00000486194 AIMP1Q12904 312 aaKnown RBP28.55■■■□□ 2.16
HLA-F-228ENST00000486194 CRY2Q49AN0 593 aa28.55■■■□□ 2.16
HLA-F-228ENST00000486194 CCDC93Q567U6 631 aa28.55■■■□□ 2.16
HLA-F-228ENST00000486194 C16orf71Q8IYS4 520 aaPredicted RBP28.55■■■□□ 2.16
HLA-F-228ENST00000486194 XAGE3Q8WTP9 111 aa28.55■■■□□ 2.16
HLA-F-228ENST00000486194 DBF4Q9UBU7 674 aaPredicted RBP28.55■■■□□ 2.16
HLA-F-228ENST00000486194 ABCC12Q96J65 1359 aa28.54■■■□□ 2.16
HLA-F-228ENST00000486194 DUSP27Q5VZP5 1158 aa28.54■■■□□ 2.16
HLA-F-228ENST00000486194 CHPF2Q9P2E5 772 aa28.54■■■□□ 2.16
HLA-F-228ENST00000486194 SLX4Q8IY92 1834 aa28.54■■■□□ 2.16
HLA-F-228ENST00000486194 NTSR2O95665 410 aa28.53■■■□□ 2.16
HLA-F-228ENST00000486194 C7orf43Q8WVR3 580 aa28.53■■■□□ 2.16
HLA-F-228ENST00000486194 RNF123Q5XPI4 1314 aa28.52■■■□□ 2.16
HLA-F-228ENST00000486194 GLTPD2A6NH11 291 aa28.52■■■□□ 2.16
HLA-F-228ENST00000486194 CCDC184Q52MB2 194 aa28.52■■■□□ 2.16
HLA-F-228ENST00000486194 RPGRQ92834 1020 aaKnown RBP28.52■■■□□ 2.16
HLA-F-228ENST00000486194 UTP14AQ9BVJ6 771 aaKnown RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms