RNA–Protein interactions for RNA: ENST00000485692.1

GTF3C5-209, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-209ENST00000485692 DDX10Q13206 875 aaKnown RBP27.63■■■□□ 2.01
GTF3C5-209ENST00000485692 COL11A2P13942 1736 aaPredicted RBP27.63■■■□□ 2.01
GTF3C5-209ENST00000485692 NBPF5PQ86XG9 351 aaPredicted RBP27.62■■■□□ 2.01
GTF3C5-209ENST00000485692 THUMPD2Q9BTF0 503 aaKnown RBP27.62■■■□□ 2.01
GTF3C5-209ENST00000485692 EIF4A1P60842 406 aaKnown RBP27.61■■■□□ 2.01
GTF3C5-209ENST00000485692 MYBBP1AQ9BQG0 1328 aaKnown RBP27.6■■■□□ 2.01
GTF3C5-209ENST00000485692 STYK1Q6J9G0 422 aa27.59■■■□□ 2.01
GTF3C5-209ENST00000485692 CNKSR1Q969H4 720 aa27.59■■■□□ 2.01
GTF3C5-209ENST00000485692 NIP7Q9Y221 180 aaKnown RBP eCLIP27.59■■■□□ 2.01
GTF3C5-209ENST00000485692 SRGNP10124 158 aa27.58■■■□□ 2.01
GTF3C5-209ENST00000485692 C16orf71Q8IYS4 520 aaPredicted RBP27.58■■■□□ 2.01
GTF3C5-209ENST00000485692 TNRC6CQ9HCJ0 1690 aaKnown RBP27.57■■■□□ 2
GTF3C5-209ENST00000485692 NFKBIEO00221 500 aa27.57■■■□□ 2
GTF3C5-209ENST00000485692 RIPK4P57078 832 aa27.57■■■□□ 2
GTF3C5-209ENST00000485692 TPTE2Q6XPS3 522 aa27.57■■■□□ 2
GTF3C5-209ENST00000485692 MASTLQ96GX5 879 aa27.57■■■□□ 2
GTF3C5-209ENST00000485692 C21orf2O43822 256 aa27.56■■■□□ 2
GTF3C5-209ENST00000485692 PRELPP51888 382 aa27.55■■■□□ 2
GTF3C5-209ENST00000485692 LMOD3Q0VAK6 560 aa27.55■■■□□ 2
GTF3C5-209ENST00000485692 RBM46Q8TBY0 533 aaKnown RBP27.55■■■□□ 2
GTF3C5-209ENST00000485692 HLFQ16534 295 aa27.54■■■□□ 2
GTF3C5-209ENST00000485692 ZNF219Q9P2Y4 722 aaPredicted RBP27.54■■■□□ 2
GTF3C5-209ENST00000485692 TSPYL4Q9UJ04 414 aa27.54■■■□□ 2
GTF3C5-209ENST00000485692 ERVV-1B6SEH8 477 aa27.53■■■□□ 2
GTF3C5-209ENST00000485692 SOGA3Q5TF21 947 aa27.53■■■□□ 2
GTF3C5-209ENST00000485692 PRPF40BQ6NWY9 871 aaKnown RBP27.53■■■□□ 2
GTF3C5-209ENST00000485692 RRAGCQ9HB90 399 aa27.53■■■□□ 2
GTF3C5-209ENST00000485692 BABAM1Q9NWV8 329 aa27.53■■■□□ 2
GTF3C5-209ENST00000485692 RRP7AQ9Y3A4 280 aaKnown RBP27.53■■■□□ 2
GTF3C5-209ENST00000485692 ARFGEF2Q9Y6D5 1785 aa27.53■■■□□ 2
GTF3C5-209ENST00000485692 TIAM2Q8IVF5 1701 aa27.53■■■□□ 2
GTF3C5-209ENST00000485692 ERBB4Q15303 1308 aa27.52■■■□□ 2
GTF3C5-209ENST00000485692 TMPOP42166 694 aaKnown RBP27.52■■■□□ 2
GTF3C5-209ENST00000485692 KIF6Q6ZMV9 814 aa27.52■■■□□ 2
GTF3C5-209ENST00000485692 NGEFQ8N5V2 710 aa27.52■■■□□ 2
GTF3C5-209ENST00000485692 FER1L6Q2WGJ9 1857 aa27.52■■■□□ 2
GTF3C5-209ENST00000485692 CCDC88AQ3V6T2 1871 aa27.52■■■□□ 2
GTF3C5-209ENST00000485692 MAP3K15Q6ZN16 1313 aa27.51■■□□□ 1.99
GTF3C5-209ENST00000485692 LTBP3Q9NS15 1303 aa27.51■■□□□ 1.99
GTF3C5-209ENST00000485692 KLRG2A4D1S0 409 aaPredicted RBP27.51■■□□□ 1.99
GTF3C5-209ENST00000485692 GLTPD2A6NH11 291 aa27.51■■□□□ 1.99
GTF3C5-209ENST00000485692 APLP1P51693 650 aa27.51■■□□□ 1.99
GTF3C5-209ENST00000485692 SLX4Q8IY92 1834 aa27.51■■□□□ 1.99
GTF3C5-209ENST00000485692 MYL6BP14649 208 aa27.5■■□□□ 1.99
GTF3C5-209ENST00000485692 NPR1P16066 1061 aa27.5■■□□□ 1.99
GTF3C5-209ENST00000485692 TAOK3Q9H2K8 898 aa27.5■■□□□ 1.99
GTF3C5-209ENST00000485692 CACNA1SQ13698 1873 aa27.5■■□□□ 1.99
GTF3C5-209ENST00000485692 FAM177BA6PVY3 158 aa27.49■■□□□ 1.99
GTF3C5-209ENST00000485692 GTF2E1P29083 439 aaPredicted RBP27.49■■□□□ 1.99
GTF3C5-209ENST00000485692 WDR43Q15061 677 aaKnown RBP eCLIP27.49■■□□□ 1.99
GTF3C5-209ENST00000485692 NYXQ9GZU5 481 aa27.49■■□□□ 1.99
GTF3C5-209ENST00000485692 FSTL1Q12841 308 aa27.48■■□□□ 1.99
GTF3C5-209ENST00000485692 NUP98P52948 1817 aa27.47■■□□□ 1.99
GTF3C5-209ENST00000485692 TTLL7Q6ZT98 887 aa27.47■■□□□ 1.99
GTF3C5-209ENST00000485692 ERFEQ4G0M1 354 aa27.46■■□□□ 1.99
GTF3C5-209ENST00000485692 DPY19L2Q6NUT2 758 aa27.46■■□□□ 1.99
GTF3C5-209ENST00000485692 CCDC146Q8IYE0 955 aa27.46■■□□□ 1.99
GTF3C5-209ENST00000485692 DICER1Q9UPY3 1922 aaKnown RBP27.45■■□□□ 1.99
GTF3C5-209ENST00000485692 VEGFAP15692 232 aaPredicted RBP27.45■■□□□ 1.98
GTF3C5-209ENST00000485692 RUNDC1Q96C34 613 aa27.45■■□□□ 1.98
GTF3C5-209ENST00000485692 ZBTB3Q9H5J0 574 aa27.45■■□□□ 1.98
GTF3C5-209ENST00000485692 C7orf43Q8WVR3 580 aa27.44■■□□□ 1.98
GTF3C5-209ENST00000485692 NEUROD2Q15784 382 aa27.43■■□□□ 1.98
GTF3C5-209ENST00000485692 CCDC93Q567U6 631 aa27.43■■□□□ 1.98
GTF3C5-209ENST00000485692 IBTKQ9P2D0 1353 aaPredicted RBP27.43■■□□□ 1.98
GTF3C5-209ENST00000485692 EIF2S2P20042 333 aaKnown RBP27.42■■□□□ 1.98
GTF3C5-209ENST00000485692 ALDH1B1P30837 517 aa27.42■■□□□ 1.98
GTF3C5-209ENST00000485692 SMC1BQ8NDV3 1235 aa27.42■■□□□ 1.98
GTF3C5-209ENST00000485692 GIGYF2Q6Y7W6 1299 aaKnown RBP27.41■■□□□ 1.98
GTF3C5-209ENST00000485692 PRKRIP1Q9H875 184 aaPredicted RBP27.41■■□□□ 1.98
GTF3C5-209ENST00000485692 ABCC12Q96J65 1359 aa27.4■■□□□ 1.98
GTF3C5-209ENST00000485692 GPTP24298 496 aa27.4■■□□□ 1.98
GTF3C5-209ENST00000485692 CRY2Q49AN0 593 aa27.4■■□□□ 1.98
GTF3C5-209ENST00000485692 NUTM1Q86Y26 1132 aa27.4■■□□□ 1.98
GTF3C5-209ENST00000485692 ADAMTS8Q9UP79 889 aa27.4■■□□□ 1.98
GTF3C5-209ENST00000485692 RIC1Q4ADV7 1423 aa27.4■■□□□ 1.98
GTF3C5-209ENST00000485692 UBN2Q6ZU65 1347 aa27.4■■□□□ 1.98
GTF3C5-209ENST00000485692 WDR90Q96KV7 1748 aa27.39■■□□□ 1.98
GTF3C5-209ENST00000485692 PDIA6Q15084 440 aa27.39■■□□□ 1.98
GTF3C5-209ENST00000485692 LRP10Q7Z4F1 713 aa27.39■■□□□ 1.98
GTF3C5-209ENST00000485692 ZNF34Q8IZ26 560 aa27.39■■□□□ 1.98
GTF3C5-209ENST00000485692 CHL1O00533 1208 aa27.38■■□□□ 1.97
GTF3C5-209ENST00000485692 RTKN2Q8IZC4 609 aa27.38■■□□□ 1.97
GTF3C5-209ENST00000485692 TRIM35Q9UPQ4 493 aa27.38■■□□□ 1.97
GTF3C5-209ENST00000485692 FKBP4Q02790 459 aaKnown RBP eCLIP27.37■■□□□ 1.97
GTF3C5-209ENST00000485692 SUSD4Q5VX71 490 aa27.37■■□□□ 1.97
GTF3C5-209ENST00000485692 PARP10Q53GL7 1025 aa27.36■■□□□ 1.97
GTF3C5-209ENST00000485692 PPP1R42Q7Z4L9 355 aa27.36■■□□□ 1.97
GTF3C5-209ENST00000485692 PROSER3Q2NL68 480 aa27.35■■□□□ 1.97
GTF3C5-209ENST00000485692 LAS1LQ9Y4W2 734 aaKnown RBP27.35■■□□□ 1.97
GTF3C5-209ENST00000485692 POTECB2RU33 542 aa27.34■■□□□ 1.97
GTF3C5-209ENST00000485692 NTSR2O95665 410 aa27.34■■□□□ 1.97
GTF3C5-209ENST00000485692 DNAJC5GQ8N7S2 189 aa27.34■■□□□ 1.97
GTF3C5-209ENST00000485692 RPGRQ92834 1020 aaKnown RBP27.34■■□□□ 1.97
GTF3C5-209ENST00000485692 ANXA1P04083 346 aa27.33■■□□□ 1.97
GTF3C5-209ENST00000485692 HOXA10P31260 410 aaPredicted RBP27.32■■□□□ 1.96
GTF3C5-209ENST00000485692 OLFM4Q6UX06 510 aa27.32■■□□□ 1.96
GTF3C5-209ENST00000485692 NECTIN2Q92692 538 aa27.32■■□□□ 1.96
GTF3C5-209ENST00000485692 HSP90AB3PQ58FF7 597 aa27.31■■□□□ 1.96
GTF3C5-209ENST00000485692 CC2D2BQ6DHV5 1058 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms