RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 CNBD1Q8NA66 436 aa22.44■■□□□ 1.18
PLD3-211ENST00000485448 MAP3K15Q6ZN16 1313 aa22.44■■□□□ 1.18
PLD3-211ENST00000485448 NBPF5PQ86XG9 351 aaPredicted RBP22.43■■□□□ 1.18
PLD3-211ENST00000485448 NIP7Q9Y221 180 aaKnown RBP eCLIP22.43■■□□□ 1.18
PLD3-211ENST00000485448 KIF13BQ9NQT8 1826 aa22.43■■□□□ 1.18
PLD3-211ENST00000485448 PRR5LQ6MZQ0 368 aa22.41■■□□□ 1.18
PLD3-211ENST00000485448 NYXQ9GZU5 481 aa22.41■■□□□ 1.18
PLD3-211ENST00000485448 DDX21Q9NR30 783 aaKnown RBP eCLIP22.41■■□□□ 1.18
PLD3-211ENST00000485448 MBIPQ9NS73 344 aa22.41■■□□□ 1.18
PLD3-211ENST00000485448 DBF4Q9UBU7 674 aaPredicted RBP22.41■■□□□ 1.18
PLD3-211ENST00000485448 GTF2E1P29083 439 aaPredicted RBP22.4■■□□□ 1.18
PLD3-211ENST00000485448 C2CD5Q86YS7 1000 aa22.4■■□□□ 1.18
PLD3-211ENST00000485448 PDIA6Q15084 440 aa22.39■■□□□ 1.18
PLD3-211ENST00000485448 HDGFL1Q5TGJ6 251 aa22.39■■□□□ 1.18
PLD3-211ENST00000485448 WWC1Q8IX03 1113 aa22.39■■□□□ 1.18
PLD3-211ENST00000485448 IL16Q14005 1332 aa22.39■■□□□ 1.17
PLD3-211ENST00000485448 CHRNA5P30532 468 aa22.38■■□□□ 1.17
PLD3-211ENST00000485448 HLFQ16534 295 aa22.38■■□□□ 1.17
PLD3-211ENST00000485448 HSP90AB3PQ58FF7 597 aa22.38■■□□□ 1.17
PLD3-211ENST00000485448 DUSP27Q5VZP5 1158 aa22.38■■□□□ 1.17
PLD3-211ENST00000485448 GIGYF2Q6Y7W6 1299 aaKnown RBP22.38■■□□□ 1.17
PLD3-211ENST00000485448 TTLL6Q8N841 843 aa22.38■■□□□ 1.17
PLD3-211ENST00000485448 HYPKQ9NX55 129 aa22.38■■□□□ 1.17
PLD3-211ENST00000485448 LAMB4A4D0S4 1761 aa22.38■■□□□ 1.17
PLD3-211ENST00000485448 TTLL7Q6ZT98 887 aa22.37■■□□□ 1.17
PLD3-211ENST00000485448 ARHGAP27Q6ZUM4 889 aa22.37■■□□□ 1.17
PLD3-211ENST00000485448 WWC3Q9ULE0 1092 aa22.37■■□□□ 1.17
PLD3-211ENST00000485448 SCN7AQ01118 1682 aa22.37■■□□□ 1.17
PLD3-211ENST00000485448 PARP10Q53GL7 1025 aa22.36■■□□□ 1.17
PLD3-211ENST00000485448 WDR63Q8IWG1 891 aa22.36■■□□□ 1.17
PLD3-211ENST00000485448 FAM9BQ8IZU0 186 aa22.36■■□□□ 1.17
PLD3-211ENST00000485448 NRXN2Q9P2S2 1712 aa22.35■■□□□ 1.17
PLD3-211ENST00000485448 COPS6Q7L5N1 327 aa22.35■■□□□ 1.17
PLD3-211ENST00000485448 LRP10Q7Z4F1 713 aa22.35■■□□□ 1.17
PLD3-211ENST00000485448 PPP1R42Q7Z4L9 355 aa22.35■■□□□ 1.17
PLD3-211ENST00000485448 CNKSR1Q969H4 720 aa22.35■■□□□ 1.17
PLD3-211ENST00000485448 ZBTB3Q9H5J0 574 aa22.35■■□□□ 1.17
PLD3-211ENST00000485448 CHD4Q14839 1912 aa22.35■■□□□ 1.17
PLD3-211ENST00000485448 ZNF784Q8NCA9 323 aaPredicted RBP22.34■■□□□ 1.17
PLD3-211ENST00000485448 KRT24Q2M2I5 525 aa22.33■■□□□ 1.17
PLD3-211ENST00000485448 STYK1Q6J9G0 422 aa22.33■■□□□ 1.17
PLD3-211ENST00000485448 ZNF34Q8IZ26 560 aa22.33■■□□□ 1.17
PLD3-211ENST00000485448 NECTIN2Q92692 538 aa22.33■■□□□ 1.17
PLD3-211ENST00000485448 ZNF622Q969S3 477 aaKnown RBP eCLIP22.33■■□□□ 1.17
PLD3-211ENST00000485448 MASTLQ96GX5 879 aa22.33■■□□□ 1.17
PLD3-211ENST00000485448 ATP10DQ9P241 1426 aa22.33■■□□□ 1.17
PLD3-211ENST00000485448 UTRNP46939 3433 aa22.33■■□□□ 1.17
PLD3-211ENST00000485448 KLRG2A4D1S0 409 aaPredicted RBP22.32■■□□□ 1.16
PLD3-211ENST00000485448 CCDC30Q5VVM6 783 aa22.32■■□□□ 1.16
PLD3-211ENST00000485448 XAGE3Q8WTP9 111 aa22.32■■□□□ 1.16
PLD3-211ENST00000485448 CHPF2Q9P2E5 772 aa22.32■■□□□ 1.16
PLD3-211ENST00000485448 SRGNP10124 158 aa22.31■■□□□ 1.16
PLD3-211ENST00000485448 AIMP1Q12904 312 aaKnown RBP22.31■■□□□ 1.16
PLD3-211ENST00000485448 ANKRD13DQ6ZTN6 518 aa22.31■■□□□ 1.16
PLD3-211ENST00000485448 IBTKQ9P2D0 1353 aaPredicted RBP22.31■■□□□ 1.16
PLD3-211ENST00000485448 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
PLD3-211ENST00000485448 NPR1P16066 1061 aa22.31■■□□□ 1.16
PLD3-211ENST00000485448 ALDH1B1P30837 517 aa22.31■■□□□ 1.16
PLD3-211ENST00000485448 PROSER3Q2NL68 480 aa22.31■■□□□ 1.16
PLD3-211ENST00000485448 SOGA3Q5TF21 947 aa22.31■■□□□ 1.16
PLD3-211ENST00000485448 PLBD2Q8NHP8 589 aa22.31■■□□□ 1.16
PLD3-211ENST00000485448 BCORQ6W2J9 1755 aa22.31■■□□□ 1.16
PLD3-211ENST00000485448 N4BP2Q86UW6 1770 aaPredicted RBP22.31■■□□□ 1.16
PLD3-211ENST00000485448 AFDNP55196 1824 aaKnown RBP22.3■■□□□ 1.16
PLD3-211ENST00000485448 KIAA1551Q9HCM1 1747 aa22.29■■□□□ 1.16
PLD3-211ENST00000485448 FAM177BA6PVY3 158 aa22.29■■□□□ 1.16
PLD3-211ENST00000485448 CCER2I3L3R5 266 aa22.29■■□□□ 1.16
PLD3-211ENST00000485448 ELL2O00472 640 aaPredicted RBP22.29■■□□□ 1.16
PLD3-211ENST00000485448 ANXA1P04083 346 aa22.29■■□□□ 1.16
PLD3-211ENST00000485448 TCIRG1Q13488 830 aa22.29■■□□□ 1.16
PLD3-211ENST00000485448 CCDC24Q8N4L8 307 aa22.29■■□□□ 1.16
PLD3-211ENST00000485448 GOLGB1Q14789 3259 aaKnown RBP22.28■■□□□ 1.16
PLD3-211ENST00000485448 GPTP24298 496 aa22.28■■□□□ 1.16
PLD3-211ENST00000485448 C8orf58Q8NAV2 365 aa22.28■■□□□ 1.16
PLD3-211ENST00000485448 UTP14AQ9BVJ6 771 aaKnown RBP22.28■■□□□ 1.16
PLD3-211ENST00000485448 DDX58O95786 925 aaKnown RBP22.27■■□□□ 1.16
PLD3-211ENST00000485448 GOLGA2Q08379 1002 aa22.27■■□□□ 1.16
PLD3-211ENST00000485448 SUSD4Q5VX71 490 aa22.27■■□□□ 1.16
PLD3-211ENST00000485448 STK31Q9BXU1 1019 aa22.27■■□□□ 1.16
PLD3-211ENST00000485448 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
PLD3-211ENST00000485448 SLC10A5Q5PT55 438 aa22.25■■□□□ 1.15
PLD3-211ENST00000485448 NLRP3Q96P20 1036 aa22.25■■□□□ 1.15
PLD3-211ENST00000485448 SALL2Q9Y467 1007 aaPredicted RBP22.25■■□□□ 1.15
PLD3-211ENST00000485448 TWISTNBQ3B726 338 aaPredicted RBP22.24■■□□□ 1.15
PLD3-211ENST00000485448 ERFEQ4G0M1 354 aa22.24■■□□□ 1.15
PLD3-211ENST00000485448 RIC3Q7Z5B4 369 aa22.24■■□□□ 1.15
PLD3-211ENST00000485448 TSR2Q969E8 191 aaKnown RBP22.24■■□□□ 1.15
PLD3-211ENST00000485448 UBN2Q6ZU65 1347 aa22.23■■□□□ 1.15
PLD3-211ENST00000485448 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
PLD3-211ENST00000485448 TRIM28Q13263 835 aaKnown RBP22.23■■□□□ 1.15
PLD3-211ENST00000485448 CRY2Q49AN0 593 aa22.23■■□□□ 1.15
PLD3-211ENST00000485448 GRIPAP1Q4V328 841 aa22.23■■□□□ 1.15
PLD3-211ENST00000485448 GPBP1L1Q9HC44 474 aaPredicted RBP22.23■■□□□ 1.15
PLD3-211ENST00000485448 BRCA1P38398 1863 aaKnown RBP22.22■■□□□ 1.15
PLD3-211ENST00000485448 NTSR2O95665 410 aa22.22■■□□□ 1.15
PLD3-211ENST00000485448 HSP90B1P14625 803 aaKnown RBP22.22■■□□□ 1.15
PLD3-211ENST00000485448 LMNB1P20700 586 aa22.22■■□□□ 1.15
PLD3-211ENST00000485448 C9orf131Q5VYM1 1079 aa22.22■■□□□ 1.15
PLD3-211ENST00000485448 PRPF40BQ6NWY9 871 aaKnown RBP22.22■■□□□ 1.15
PLD3-211ENST00000485448 NLRP10Q86W26 655 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms