RNA–Protein interactions for RNA: ENST00000484700.1

GYPC-206, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 5

Gene GYPC, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-206ENST00000484700 CNKSR1Q969H4 720 aa23.78■■□□□ 1.4
GYPC-206ENST00000484700 NIP7Q9Y221 180 aaKnown RBP eCLIP23.78■■□□□ 1.4
GYPC-206ENST00000484700 MYBBP1AQ9BQG0 1328 aaKnown RBP23.78■■□□□ 1.4
GYPC-206ENST00000484700 DLG5Q8TDM6 1919 aa23.77■■□□□ 1.4
GYPC-206ENST00000484700 LMOD3Q0VAK6 560 aa23.77■■□□□ 1.4
GYPC-206ENST00000484700 BCORQ6W2J9 1755 aa23.77■■□□□ 1.4
GYPC-206ENST00000484700 C21orf2O43822 256 aa23.76■■□□□ 1.39
GYPC-206ENST00000484700 RIPK4P57078 832 aa23.76■■□□□ 1.39
GYPC-206ENST00000484700 MASTLQ96GX5 879 aa23.76■■□□□ 1.39
GYPC-206ENST00000484700 SRGNP10124 158 aa23.75■■□□□ 1.39
GYPC-206ENST00000484700 NGEFQ8N5V2 710 aa23.75■■□□□ 1.39
GYPC-206ENST00000484700 ZNF219Q9P2Y4 722 aaPredicted RBP23.75■■□□□ 1.39
GYPC-206ENST00000484700 ANKRD31Q8N7Z5 1873 aa23.75■■□□□ 1.39
GYPC-206ENST00000484700 GTF2E1P29083 439 aaPredicted RBP23.74■■□□□ 1.39
GYPC-206ENST00000484700 SOGA3Q5TF21 947 aa23.74■■□□□ 1.39
GYPC-206ENST00000484700 KIF6Q6ZMV9 814 aa23.74■■□□□ 1.39
GYPC-206ENST00000484700 TSPYL4Q9UJ04 414 aa23.74■■□□□ 1.39
GYPC-206ENST00000484700 RRP7AQ9Y3A4 280 aaKnown RBP23.74■■□□□ 1.39
GYPC-206ENST00000484700 SBF1O95248 1867 aa23.73■■□□□ 1.39
GYPC-206ENST00000484700 NFKBIEO00221 500 aa23.73■■□□□ 1.39
GYPC-206ENST00000484700 RBM46Q8TBY0 533 aaKnown RBP23.73■■□□□ 1.39
GYPC-206ENST00000484700 RRAGCQ9HB90 399 aa23.73■■□□□ 1.39
GYPC-206ENST00000484700 KDM3BQ7LBC6 1761 aa23.73■■□□□ 1.39
GYPC-206ENST00000484700 ERVV-1B6SEH8 477 aa23.72■■□□□ 1.39
GYPC-206ENST00000484700 WDR43Q15061 677 aaKnown RBP eCLIP23.72■■□□□ 1.39
GYPC-206ENST00000484700 BABAM1Q9NWV8 329 aa23.72■■□□□ 1.39
GYPC-206ENST00000484700 LAMB4A4D0S4 1761 aa23.72■■□□□ 1.39
GYPC-206ENST00000484700 FAM177BA6PVY3 158 aa23.71■■□□□ 1.39
GYPC-206ENST00000484700 MYL6BP14649 208 aa23.71■■□□□ 1.39
GYPC-206ENST00000484700 TMPOP42166 694 aaKnown RBP23.71■■□□□ 1.39
GYPC-206ENST00000484700 APLP1P51693 650 aa23.71■■□□□ 1.39
GYPC-206ENST00000484700 HLFQ16534 295 aa23.71■■□□□ 1.39
GYPC-206ENST00000484700 PRPF40BQ6NWY9 871 aaKnown RBP23.71■■□□□ 1.39
GYPC-206ENST00000484700 ERBB4Q15303 1308 aa23.7■■□□□ 1.38
GYPC-206ENST00000484700 NPR1P16066 1061 aa23.7■■□□□ 1.38
GYPC-206ENST00000484700 NYXQ9GZU5 481 aa23.7■■□□□ 1.38
GYPC-206ENST00000484700 MAP3K15Q6ZN16 1313 aa23.69■■□□□ 1.38
GYPC-206ENST00000484700 GLTPD2A6NH11 291 aa23.69■■□□□ 1.38
GYPC-206ENST00000484700 FSTL1Q12841 308 aa23.69■■□□□ 1.38
GYPC-206ENST00000484700 TAOK3Q9H2K8 898 aa23.69■■□□□ 1.38
GYPC-206ENST00000484700 COL11A2P13942 1736 aaPredicted RBP23.69■■□□□ 1.38
GYPC-206ENST00000484700 CEP350Q5VT06 3117 aa23.68■■□□□ 1.38
GYPC-206ENST00000484700 PRELPP51888 382 aa23.68■■□□□ 1.38
GYPC-206ENST00000484700 DPY19L2Q6NUT2 758 aa23.68■■□□□ 1.38
GYPC-206ENST00000484700 LTBP3Q9NS15 1303 aa23.67■■□□□ 1.38
GYPC-206ENST00000484700 VEGFAP15692 232 aaPredicted RBP23.67■■□□□ 1.38
GYPC-206ENST00000484700 ERFEQ4G0M1 354 aa23.67■■□□□ 1.38
GYPC-206ENST00000484700 KLRG2A4D1S0 409 aaPredicted RBP23.66■■□□□ 1.38
GYPC-206ENST00000484700 NEUROD2Q15784 382 aa23.66■■□□□ 1.38
GYPC-206ENST00000484700 TTLL7Q6ZT98 887 aa23.66■■□□□ 1.38
GYPC-206ENST00000484700 CCDC146Q8IYE0 955 aa23.66■■□□□ 1.38
GYPC-206ENST00000484700 RUNDC1Q96C34 613 aa23.66■■□□□ 1.38
GYPC-206ENST00000484700 TNRC6CQ9HCJ0 1690 aaKnown RBP23.65■■□□□ 1.38
GYPC-206ENST00000484700 EIF2S2P20042 333 aaKnown RBP23.65■■□□□ 1.38
GYPC-206ENST00000484700 ZBTB3Q9H5J0 574 aa23.65■■□□□ 1.38
GYPC-206ENST00000484700 ALDH1B1P30837 517 aa23.64■■□□□ 1.37
GYPC-206ENST00000484700 CCDC93Q567U6 631 aa23.64■■□□□ 1.37
GYPC-206ENST00000484700 SMC1BQ8NDV3 1235 aa23.63■■□□□ 1.37
GYPC-206ENST00000484700 SLX4Q8IY92 1834 aa23.63■■□□□ 1.37
GYPC-206ENST00000484700 GPTP24298 496 aa23.62■■□□□ 1.37
GYPC-206ENST00000484700 RTKN2Q8IZC4 609 aa23.61■■□□□ 1.37
GYPC-206ENST00000484700 C7orf43Q8WVR3 580 aa23.61■■□□□ 1.37
GYPC-206ENST00000484700 ADAMTS8Q9UP79 889 aa23.61■■□□□ 1.37
GYPC-206ENST00000484700 TIAM2Q8IVF5 1701 aa23.61■■□□□ 1.37
GYPC-206ENST00000484700 FER1L6Q2WGJ9 1857 aa23.6■■□□□ 1.37
GYPC-206ENST00000484700 CCDC88AQ3V6T2 1871 aa23.6■■□□□ 1.37
GYPC-206ENST00000484700 GIGYF2Q6Y7W6 1299 aaKnown RBP23.6■■□□□ 1.37
GYPC-206ENST00000484700 NUTM1Q86Y26 1132 aa23.6■■□□□ 1.37
GYPC-206ENST00000484700 PRKRIP1Q9H875 184 aaPredicted RBP23.6■■□□□ 1.37
GYPC-206ENST00000484700 LAS1LQ9Y4W2 734 aaKnown RBP23.6■■□□□ 1.37
GYPC-206ENST00000484700 IBTKQ9P2D0 1353 aaPredicted RBP23.6■■□□□ 1.37
GYPC-206ENST00000484700 PARP10Q53GL7 1025 aa23.59■■□□□ 1.37
GYPC-206ENST00000484700 PPP1R42Q7Z4L9 355 aa23.59■■□□□ 1.37
GYPC-206ENST00000484700 RPGRQ92834 1020 aaKnown RBP23.59■■□□□ 1.37
GYPC-206ENST00000484700 ARFGEF2Q9Y6D5 1785 aa23.59■■□□□ 1.37
GYPC-206ENST00000484700 CHL1O00533 1208 aa23.58■■□□□ 1.37
GYPC-206ENST00000484700 FKBP4Q02790 459 aaKnown RBP eCLIP23.58■■□□□ 1.37
GYPC-206ENST00000484700 PDIA6Q15084 440 aa23.58■■□□□ 1.37
GYPC-206ENST00000484700 SUSD4Q5VX71 490 aa23.58■■□□□ 1.37
GYPC-206ENST00000484700 ZNF34Q8IZ26 560 aa23.58■■□□□ 1.37
GYPC-206ENST00000484700 CACNA1SQ13698 1873 aa23.58■■□□□ 1.36
GYPC-206ENST00000484700 NUP98P52948 1817 aa23.57■■□□□ 1.36
GYPC-206ENST00000484700 CRY2Q49AN0 593 aa23.57■■□□□ 1.36
GYPC-206ENST00000484700 TRIM35Q9UPQ4 493 aa23.57■■□□□ 1.36
GYPC-206ENST00000484700 UBN2Q6ZU65 1347 aa23.57■■□□□ 1.36
GYPC-206ENST00000484700 ABCC12Q96J65 1359 aa23.56■■□□□ 1.36
GYPC-206ENST00000484700 NECTIN2Q92692 538 aa23.56■■□□□ 1.36
GYPC-206ENST00000484700 HSP90AB3PQ58FF7 597 aa23.55■■□□□ 1.36
GYPC-206ENST00000484700 CC2D2BQ6DHV5 1058 aa23.55■■□□□ 1.36
GYPC-206ENST00000484700 DICER1Q9UPY3 1922 aaKnown RBP23.55■■□□□ 1.36
GYPC-206ENST00000484700 RIC1Q4ADV7 1423 aa23.54■■□□□ 1.36
GYPC-206ENST00000484700 ANXA1P04083 346 aa23.54■■□□□ 1.36
GYPC-206ENST00000484700 PROSER3Q2NL68 480 aa23.54■■□□□ 1.36
GYPC-206ENST00000484700 LRP10Q7Z4F1 713 aa23.54■■□□□ 1.36
GYPC-206ENST00000484700 RBM17Q96I25 401 aaKnown RBP23.54■■□□□ 1.36
GYPC-206ENST00000484700 UTP14AQ9BVJ6 771 aaKnown RBP23.54■■□□□ 1.36
GYPC-206ENST00000484700 DDX21Q9NR30 783 aaKnown RBP eCLIP23.54■■□□□ 1.36
GYPC-206ENST00000484700 NTSR2O95665 410 aa23.53■■□□□ 1.36
GYPC-206ENST00000484700 HOXA10P31260 410 aaPredicted RBP23.53■■□□□ 1.36
GYPC-206ENST00000484700 AIMP1Q12904 312 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms