RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 TEX13AQ9BXU3 409 aaPredicted RBP6.85□□□□□ -1.31
CNTN4-216ENST00000484686 NOB1Q9ULX3 412 aaKnown RBP6.85□□□□□ -1.31
CNTN4-216ENST00000484686 RTCBQ9Y3I0 505 aaKnown RBP6.85□□□□□ -1.31
CNTN4-216ENST00000484686 SIPA1L3O60292 1781 aaPredicted RBP6.84□□□□□ -1.31
CNTN4-216ENST00000484686 R3HDM1Q15032 1099 aaKnown RBP6.84□□□□□ -1.31
CNTN4-216ENST00000484686 BICDL1Q6ZP65 573 aa6.84□□□□□ -1.31
CNTN4-216ENST00000484686 SRP68Q9UHB9 627 aaKnown RBP6.84□□□□□ -1.31
CNTN4-216ENST00000484686 FAM177BA6PVY3 158 aa6.84□□□□□ -1.31
CNTN4-216ENST00000484686 RTL5Q5HYW3 569 aaPredicted RBP6.84□□□□□ -1.31
CNTN4-216ENST00000484686 ARHGEF1Q92888 912 aaKnown RBP6.84□□□□□ -1.31
CNTN4-216ENST00000484686 PI4KAP2A4QPH2 592 aa6.83□□□□□ -1.32
CNTN4-216ENST00000484686 RFC4P35249 363 aa6.83□□□□□ -1.32
CNTN4-216ENST00000484686 FLIIQ13045 1269 aa6.83□□□□□ -1.32
CNTN4-216ENST00000484686 TRAPPC3LQ5T215 181 aa6.83□□□□□ -1.32
CNTN4-216ENST00000484686 MSL1Q68DK7 614 aa6.83□□□□□ -1.32
CNTN4-216ENST00000484686 PI4KAP1Q8N8J0 262 aa6.83□□□□□ -1.32
CNTN4-216ENST00000484686 DDX21Q9NR30 783 aaKnown RBP eCLIP6.83□□□□□ -1.32
CNTN4-216ENST00000484686 KDM3BQ7LBC6 1761 aa6.83□□□□□ -1.32
CNTN4-216ENST00000484686 SLC15A2Q16348 729 aa6.83□□□□□ -1.32
CNTN4-216ENST00000484686 HLFQ16534 295 aa6.83□□□□□ -1.32
CNTN4-216ENST00000484686 DZIP3Q86Y13 1208 aaKnown RBP6.83□□□□□ -1.32
CNTN4-216ENST00000484686 ATP5J2-PTCD1G3V325 749 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 GPTP24298 496 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 C20orf194Q5TEA3 1177 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 USPL1Q5W0Q7 1092 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.82□□□□□ -1.32
CNTN4-216ENST00000484686 RIC3Q7Z5B4 369 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 COL23A1Q86Y22 540 aaPredicted RBP6.82□□□□□ -1.32
CNTN4-216ENST00000484686 MRPL50Q8N5N7 158 aaKnown RBP6.82□□□□□ -1.32
CNTN4-216ENST00000484686 MYH14Q7Z406 1995 aaKnown RBP6.82□□□□□ -1.32
CNTN4-216ENST00000484686 RPS6KA4O75676 772 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 HOXB7P09629 217 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 EIF5P55010 431 aaKnown RBP6.82□□□□□ -1.32
CNTN4-216ENST00000484686 ANKRD13DQ6ZTN6 518 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 LRP10Q7Z4F1 713 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 JARID2Q92833 1246 aaPredicted RBP6.82□□□□□ -1.32
CNTN4-216ENST00000484686 HYPKQ9NX55 129 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 STK32BQ9NY57 414 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 C5P01031 1676 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 ZPR1O75312 459 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 ZBTB7AO95365 584 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 IL6STP40189 918 aaPredicted RBP6.82□□□□□ -1.32
CNTN4-216ENST00000484686 CCDC24Q8N4L8 307 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 AKT1S1Q96B36 256 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 CHMP4BQ9H444 224 aaKnown RBP6.82□□□□□ -1.32
CNTN4-216ENST00000484686 MAP3K2Q9Y2U5 619 aa6.82□□□□□ -1.32
CNTN4-216ENST00000484686 TNS1Q9HBL0 1735 aaKnown RBP6.82□□□□□ -1.32
CNTN4-216ENST00000484686 PANK1Q8TE04 598 aa6.81□□□□□ -1.32
CNTN4-216ENST00000484686 NAP1L2Q9ULW6 460 aaPredicted RBP6.81□□□□□ -1.32
CNTN4-216ENST00000484686 COL15A1P39059 1388 aa6.81□□□□□ -1.32
CNTN4-216ENST00000484686 SOCS7O14512 581 aa6.81□□□□□ -1.32
CNTN4-216ENST00000484686 TRIM27P14373 513 aa6.81□□□□□ -1.32
CNTN4-216ENST00000484686 CWF19L2Q2TBE0 894 aaKnown RBP6.81□□□□□ -1.32
CNTN4-216ENST00000484686 SOS1Q07889 1333 aaPredicted RBP6.81□□□□□ -1.32
CNTN4-216ENST00000484686 PNPLA7Q6ZV29 1317 aa6.81□□□□□ -1.32
CNTN4-216ENST00000484686 CNTNAP4Q9C0A0 1308 aa6.81□□□□□ -1.32
CNTN4-216ENST00000484686 PAPPAQ13219 1627 aa6.81□□□□□ -1.32
CNTN4-216ENST00000484686 UBR2Q8IWV8 1755 aa6.81□□□□□ -1.32
CNTN4-216ENST00000484686 FKBP8Q14318 412 aa6.8□□□□□ -1.32
CNTN4-216ENST00000484686 ALDH1L2Q3SY69 923 aa6.8□□□□□ -1.32
CNTN4-216ENST00000484686 KIF6Q6ZMV9 814 aa6.8□□□□□ -1.32
CNTN4-216ENST00000484686 ATF5Q9Y2D1 282 aaPredicted RBP6.8□□□□□ -1.32
CNTN4-216ENST00000484686 CT47B1P0C2W7 299 aaPredicted RBP6.8□□□□□ -1.32
CNTN4-216ENST00000484686 RLBP1P12271 317 aa6.8□□□□□ -1.32
CNTN4-216ENST00000484686 RC3H1Q5TC82 1133 aaKnown RBP6.8□□□□□ -1.32
CNTN4-216ENST00000484686 FTSJ3Q8IY81 847 aaKnown RBP6.8□□□□□ -1.32
CNTN4-216ENST00000484686 MYD88Q99836 296 aa6.8□□□□□ -1.32
CNTN4-216ENST00000484686 NPHP1O15259 732 aa6.8□□□□□ -1.32
CNTN4-216ENST00000484686 LY75O60449 1722 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 DDX58O95786 925 aaKnown RBP6.79□□□□□ -1.32
CNTN4-216ENST00000484686 SSFA2P28290 1259 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 ZKSCAN2Q63HK3 967 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 TBC1D9BQ66K14 1250 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 ATF7IPQ6VMQ6 1270 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 SYNE4Q8N205 404 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 PPP1R1BQ9UD71 204 aaPredicted RBP6.79□□□□□ -1.32
CNTN4-216ENST00000484686 NIP7Q9Y221 180 aaKnown RBP eCLIP6.79□□□□□ -1.32
CNTN4-216ENST00000484686 COG6Q9Y2V7 657 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 C4BP0C0L5 1744 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 TJP1Q07157 1748 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 CAMTA2O94983 1202 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 GYS1P13807 737 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 KSR2Q6VAB6 950 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 DNAAF4Q8WXU2 420 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 BCL2L12Q9HB09 334 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 WWC3Q9ULE0 1092 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 MAP3K15Q6ZN16 1313 aa6.79□□□□□ -1.32
CNTN4-216ENST00000484686 IPO8O15397 1037 aaKnown RBP6.78□□□□□ -1.32
CNTN4-216ENST00000484686 NUTM1Q86Y26 1132 aa6.78□□□□□ -1.32
CNTN4-216ENST00000484686 ITPRIPQ8IWB1 547 aa6.78□□□□□ -1.32
CNTN4-216ENST00000484686 PLBD2Q8NHP8 589 aa6.78□□□□□ -1.32
CNTN4-216ENST00000484686 NARFQ9UHQ1 456 aa6.78□□□□□ -1.32
CNTN4-216ENST00000484686 RBM19Q9Y4C8 960 aaKnown RBP6.78□□□□□ -1.32
CNTN4-216ENST00000484686 KIF16BQ96L93 1317 aa6.78□□□□□ -1.32
CNTN4-216ENST00000484686 ADCY9O60503 1353 aa6.78□□□□□ -1.32
CNTN4-216ENST00000484686 RRP1P56182 461 aaKnown RBP6.78□□□□□ -1.32
CNTN4-216ENST00000484686 TMEM57Q8N5G2 664 aa6.78□□□□□ -1.32
CNTN4-216ENST00000484686 FAM89AQ96GI7 184 aa6.78□□□□□ -1.32
CNTN4-216ENST00000484686 USP42Q9H9J4 1324 aaKnown RBP6.78□□□□□ -1.32
CNTN4-216ENST00000484686 IGKV5-2P06315 115 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms