RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 RASSF7Q02833 373 aa23.38■■□□□ 1.33
RNF38-207ENST00000484621 BCL2L12Q9HB09 334 aa23.38■■□□□ 1.33
RNF38-207ENST00000484621 BABAM1Q9NWV8 329 aa23.38■■□□□ 1.33
RNF38-207ENST00000484621 LAS1LQ9Y4W2 734 aaKnown RBP23.38■■□□□ 1.33
RNF38-207ENST00000484621 AFDNP55196 1824 aaKnown RBP23.38■■□□□ 1.33
RNF38-207ENST00000484621 HSPA1AP0DMV8 641 aaKnown RBP23.37■■□□□ 1.33
RNF38-207ENST00000484621 HSPA1BP0DMV9 641 aaKnown RBP23.37■■□□□ 1.33
RNF38-207ENST00000484621 NFIXQ14938 502 aa23.37■■□□□ 1.33
RNF38-207ENST00000484621 POLRMTO00411 1230 aaKnown RBP23.36■■□□□ 1.33
RNF38-207ENST00000484621 DZIP3Q86Y13 1208 aaKnown RBP23.36■■□□□ 1.33
RNF38-207ENST00000484621 BCORQ6W2J9 1755 aa23.35■■□□□ 1.33
RNF38-207ENST00000484621 BICDL1Q6ZP65 573 aa23.35■■□□□ 1.33
RNF38-207ENST00000484621 NBPF26B4DH59 902 aa23.34■■□□□ 1.33
RNF38-207ENST00000484621 NBPF10Q6P3W6 841 aaKnown RBP23.34■■□□□ 1.33
RNF38-207ENST00000484621 NBPF15Q8N660 670 aa23.34■■□□□ 1.33
RNF38-207ENST00000484621 PIM2Q9P1W9 311 aa23.34■■□□□ 1.33
RNF38-207ENST00000484621 KDM2BQ8NHM5 1336 aa23.33■■□□□ 1.33
RNF38-207ENST00000484621 DALRD3Q5D0E6 543 aaKnown RBP23.33■■□□□ 1.33
RNF38-207ENST00000484621 CAMTA2O94983 1202 aa23.32■■□□□ 1.32
RNF38-207ENST00000484621 TBC1D9BQ66K14 1250 aa23.32■■□□□ 1.32
RNF38-207ENST00000484621 TIAM2Q8IVF5 1701 aa23.32■■□□□ 1.32
RNF38-207ENST00000484621 NRXN2Q9P2S2 1712 aa23.31■■□□□ 1.32
RNF38-207ENST00000484621 CHL1O00533 1208 aa23.31■■□□□ 1.32
RNF38-207ENST00000484621 SERPINB2P05120 415 aa23.31■■□□□ 1.32
RNF38-207ENST00000484621 SMC1BQ8NDV3 1235 aa23.31■■□□□ 1.32
RNF38-207ENST00000484621 NGEFQ8N5V2 710 aa23.3■■□□□ 1.32
RNF38-207ENST00000484621 EIF2S2P20042 333 aaKnown RBP23.29■■□□□ 1.32
RNF38-207ENST00000484621 ZNF652Q9Y2D9 606 aa23.29■■□□□ 1.32
RNF38-207ENST00000484621 MYL6BP14649 208 aa23.28■■□□□ 1.32
RNF38-207ENST00000484621 CALD1Q05682 793 aaKnown RBP23.28■■□□□ 1.32
RNF38-207ENST00000484621 CFAP44Q96MT7 982 aa23.28■■□□□ 1.32
RNF38-207ENST00000484621 SETDB2Q96T68 719 aa23.28■■□□□ 1.32
RNF38-207ENST00000484621 CARMIL3Q8ND23 1372 aa23.27■■□□□ 1.32
RNF38-207ENST00000484621 CCDC88AQ3V6T2 1871 aa23.27■■□□□ 1.32
RNF38-207ENST00000484621 CLEC4GQ6UXB4 293 aa23.26■■□□□ 1.31
RNF38-207ENST00000484621 ERBB4Q15303 1308 aa23.26■■□□□ 1.31
RNF38-207ENST00000484621 DLEC1Q9Y238 1755 aa23.25■■□□□ 1.31
RNF38-207ENST00000484621 NUP98P52948 1817 aa23.25■■□□□ 1.31
RNF38-207ENST00000484621 NPHP1O15259 732 aa23.25■■□□□ 1.31
RNF38-207ENST00000484621 KRT24Q2M2I5 525 aa23.25■■□□□ 1.31
RNF38-207ENST00000484621 POTECB2RU33 542 aa23.24■■□□□ 1.31
RNF38-207ENST00000484621 GNAI1P63096 354 aa23.24■■□□□ 1.31
RNF38-207ENST00000484621 KIF6Q6ZMV9 814 aa23.24■■□□□ 1.31
RNF38-207ENST00000484621 NECTIN2Q92692 538 aa23.24■■□□□ 1.31
RNF38-207ENST00000484621 MBIPQ9NS73 344 aa23.24■■□□□ 1.31
RNF38-207ENST00000484621 IFT57Q9NWB7 429 aa23.23■■□□□ 1.31
RNF38-207ENST00000484621 TTLL7Q6ZT98 887 aa23.22■■□□□ 1.31
RNF38-207ENST00000484621 FAM9BQ8IZU0 186 aa23.22■■□□□ 1.31
RNF38-207ENST00000484621 ANKRD31Q8N7Z5 1873 aa23.22■■□□□ 1.31
RNF38-207ENST00000484621 RGL2O15211 777 aa23.21■■□□□ 1.31
RNF38-207ENST00000484621 ZNF853P0CG23 659 aa23.21■■□□□ 1.31
RNF38-207ENST00000484621 HLFQ16534 295 aa23.21■■□□□ 1.31
RNF38-207ENST00000484621 CNBD1Q8NA66 436 aa23.21■■□□□ 1.31
RNF38-207ENST00000484621 NIP7Q9Y221 180 aaKnown RBP eCLIP23.21■■□□□ 1.31
RNF38-207ENST00000484621 MAP3K15Q6ZN16 1313 aa23.21■■□□□ 1.31
RNF38-207ENST00000484621 ERVV-1B6SEH8 477 aa23.2■■□□□ 1.3
RNF38-207ENST00000484621 ANXA1P04083 346 aa23.2■■□□□ 1.3
RNF38-207ENST00000484621 PRR5LQ6MZQ0 368 aa23.2■■□□□ 1.3
RNF38-207ENST00000484621 CCDC24Q8N4L8 307 aa23.2■■□□□ 1.3
RNF38-207ENST00000484621 GLTPD2A6NH11 291 aa23.19■■□□□ 1.3
RNF38-207ENST00000484621 HOXB7P09629 217 aa23.19■■□□□ 1.3
RNF38-207ENST00000484621 ST5P78524 1137 aa23.19■■□□□ 1.3
RNF38-207ENST00000484621 PDIA6Q15084 440 aa23.19■■□□□ 1.3
RNF38-207ENST00000484621 PROSER3Q2NL68 480 aa23.19■■□□□ 1.3
RNF38-207ENST00000484621 NBPF5PQ86XG9 351 aaPredicted RBP23.19■■□□□ 1.3
RNF38-207ENST00000484621 ZBTB3Q9H5J0 574 aa23.19■■□□□ 1.3
RNF38-207ENST00000484621 NFKBIEO00221 500 aa23.18■■□□□ 1.3
RNF38-207ENST00000484621 CCDC27Q2M243 656 aa23.18■■□□□ 1.3
RNF38-207ENST00000484621 HDGFL1Q5TGJ6 251 aa23.18■■□□□ 1.3
RNF38-207ENST00000484621 DUSP27Q5VZP5 1158 aa23.18■■□□□ 1.3
RNF38-207ENST00000484621 C2CD5Q86YS7 1000 aa23.18■■□□□ 1.3
RNF38-207ENST00000484621 FAM177BA6PVY3 158 aa23.17■■□□□ 1.3
RNF38-207ENST00000484621 H0YIN7 160 aa23.17■■□□□ 1.3
RNF38-207ENST00000484621 VEGFAP15692 232 aaPredicted RBP23.17■■□□□ 1.3
RNF38-207ENST00000484621 WWC1Q8IX03 1113 aa23.17■■□□□ 1.3
RNF38-207ENST00000484621 BRIP1Q9BX63 1249 aa23.17■■□□□ 1.3
RNF38-207ENST00000484621 SALL2Q9Y467 1007 aaPredicted RBP23.17■■□□□ 1.3
RNF38-207ENST00000484621 POTEIP0CG38 1075 aa23.16■■□□□ 1.3
RNF38-207ENST00000484621 POTEJP0CG39 1038 aa23.16■■□□□ 1.3
RNF38-207ENST00000484621 PDE6BP35913 854 aa23.16■■□□□ 1.3
RNF38-207ENST00000484621 DDX21Q9NR30 783 aaKnown RBP eCLIP23.16■■□□□ 1.3
RNF38-207ENST00000484621 MKRN1Q9UHC7 482 aaKnown RBP23.16■■□□□ 1.3
RNF38-207ENST00000484621 LMNB1P20700 586 aa23.15■■□□□ 1.3
RNF38-207ENST00000484621 AIMP1Q12904 312 aaKnown RBP23.15■■□□□ 1.3
RNF38-207ENST00000484621 TPTE2Q6XPS3 522 aa23.15■■□□□ 1.3
RNF38-207ENST00000484621 LRP10Q7Z4F1 713 aa23.15■■□□□ 1.3
RNF38-207ENST00000484621 CHPF2Q9P2E5 772 aa23.15■■□□□ 1.3
RNF38-207ENST00000484621 ELL2O00472 640 aaPredicted RBP23.14■■□□□ 1.29
RNF38-207ENST00000484621 GTF2E1P29083 439 aaPredicted RBP23.14■■□□□ 1.29
RNF38-207ENST00000484621 XAGE3Q8WTP9 111 aa23.14■■□□□ 1.29
RNF38-207ENST00000484621 PDZRN3Q9UPQ7 1066 aa23.14■■□□□ 1.29
RNF38-207ENST00000484621 COL11A2P13942 1736 aaPredicted RBP23.13■■□□□ 1.29
RNF38-207ENST00000484621 ZC3H4Q9UPT8 1303 aaKnown RBP23.13■■□□□ 1.29
RNF38-207ENST00000484621 FOXN1O15353 648 aa23.13■■□□□ 1.29
RNF38-207ENST00000484621 GPTP24298 496 aa23.13■■□□□ 1.29
RNF38-207ENST00000484621 NCBP3Q53F19 620 aaKnown RBP23.13■■□□□ 1.29
RNF38-207ENST00000484621 GIGYF2Q6Y7W6 1299 aaKnown RBP23.13■■□□□ 1.29
RNF38-207ENST00000484621 COPS6Q7L5N1 327 aa23.13■■□□□ 1.29
RNF38-207ENST00000484621 CACNA1SQ13698 1873 aa23.12■■□□□ 1.29
RNF38-207ENST00000484621 TTLL6Q8N841 843 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms