RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 ITPK1Q13572 414 aa11.87□□□□□ -0.51
DDX39B-221ENST00000484566 TRAPPC3LQ5T215 181 aa11.87□□□□□ -0.51
DDX39B-221ENST00000484566 TMEM92Q6UXU6 159 aa11.87□□□□□ -0.51
DDX39B-221ENST00000484566 TESK2Q96S53 571 aa11.87□□□□□ -0.51
DDX39B-221ENST00000484566 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
DDX39B-221ENST00000484566 ST20-MTHFSA0A0A6YYL1 179 aa11.86□□□□□ -0.51
DDX39B-221ENST00000484566 DPEP1P16444 411 aa11.86□□□□□ -0.51
DDX39B-221ENST00000484566 ASAP1Q9ULH1 1129 aa11.86□□□□□ -0.51
DDX39B-221ENST00000484566 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
DDX39B-221ENST00000484566 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
DDX39B-221ENST00000484566 CNTNAP1P78357 1384 aa11.85□□□□□ -0.51
DDX39B-221ENST00000484566 KDRP35968 1356 aa11.84□□□□□ -0.51
DDX39B-221ENST00000484566 COL5A3P25940 1745 aaPredicted RBP11.84□□□□□ -0.51
DDX39B-221ENST00000484566 RFC4P35249 363 aa11.84□□□□□ -0.51
DDX39B-221ENST00000484566 IFNL2Q8IZJ0 200 aa11.84□□□□□ -0.51
DDX39B-221ENST00000484566 RNF181Q9P0P0 153 aa11.84□□□□□ -0.51
DDX39B-221ENST00000484566 ZNF831Q5JPB2 1677 aa11.84□□□□□ -0.51
DDX39B-221ENST00000484566 ANKRD26Q9UPS8 1709 aa11.83□□□□□ -0.52
DDX39B-221ENST00000484566 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
DDX39B-221ENST00000484566 PHKG2P15735 406 aa11.83□□□□□ -0.52
DDX39B-221ENST00000484566 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
DDX39B-221ENST00000484566 DALRD3Q5D0E6 543 aaKnown RBP11.83□□□□□ -0.52
DDX39B-221ENST00000484566 ATG3Q9NT62 314 aa11.83□□□□□ -0.52
DDX39B-221ENST00000484566 PIM2Q9P1W9 311 aa11.83□□□□□ -0.52
DDX39B-221ENST00000484566 EMILIN1Q9Y6C2 1016 aa11.83□□□□□ -0.52
DDX39B-221ENST00000484566 CNTNAP4Q9C0A0 1308 aa11.83□□□□□ -0.52
DDX39B-221ENST00000484566 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
DDX39B-221ENST00000484566 GYS1P13807 737 aa11.82□□□□□ -0.52
DDX39B-221ENST00000484566 VEGFAP15692 232 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-221ENST00000484566 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
DDX39B-221ENST00000484566 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-221ENST00000484566 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
DDX39B-221ENST00000484566 DLL1O00548 723 aa11.81□□□□□ -0.52
DDX39B-221ENST00000484566 VEGFBP49765 207 aa11.81□□□□□ -0.52
DDX39B-221ENST00000484566 RC3H1Q5TC82 1133 aaKnown RBP11.81□□□□□ -0.52
DDX39B-221ENST00000484566 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
DDX39B-221ENST00000484566 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
DDX39B-221ENST00000484566 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
DDX39B-221ENST00000484566 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
DDX39B-221ENST00000484566 FOXK1P85037 733 aa11.8□□□□□ -0.52
DDX39B-221ENST00000484566 CDCA8Q53HL2 280 aa11.8□□□□□ -0.52
DDX39B-221ENST00000484566 ZC3H4Q9UPT8 1303 aaKnown RBP11.8□□□□□ -0.52
DDX39B-221ENST00000484566 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
DDX39B-221ENST00000484566 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
DDX39B-221ENST00000484566 KCNA3P22001 575 aa11.79□□□□□ -0.52
DDX39B-221ENST00000484566 EYA1Q99502 592 aa11.79□□□□□ -0.52
DDX39B-221ENST00000484566 WASHC2AQ641Q2 1341 aa11.79□□□□□ -0.52
DDX39B-221ENST00000484566 A0A0C4DFX4 3053 aa11.78□□□□□ -0.52
DDX39B-221ENST00000484566 ERVV-2B6SEH9 535 aa11.78□□□□□ -0.52
DDX39B-221ENST00000484566 PLPP6Q8IY26 295 aa11.78□□□□□ -0.52
DDX39B-221ENST00000484566 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
DDX39B-221ENST00000484566 WDR70Q9NW82 654 aa11.78□□□□□ -0.52
DDX39B-221ENST00000484566 CASP8AP2Q9UKL3 1982 aa11.78□□□□□ -0.52
DDX39B-221ENST00000484566 SLC4A9Q96Q91 983 aa11.77□□□□□ -0.53
DDX39B-221ENST00000484566 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
DDX39B-221ENST00000484566 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
DDX39B-221ENST00000484566 CHRNA5P30532 468 aa11.76□□□□□ -0.53
DDX39B-221ENST00000484566 CABP4P57796 275 aa11.76□□□□□ -0.53
DDX39B-221ENST00000484566 PPP1R15BQ5SWA1 713 aa11.76□□□□□ -0.53
DDX39B-221ENST00000484566 TIAM2Q8IVF5 1701 aa11.76□□□□□ -0.53
DDX39B-221ENST00000484566 CCDC88AQ3V6T2 1871 aa11.75□□□□□ -0.53
DDX39B-221ENST00000484566 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
DDX39B-221ENST00000484566 MAP2K1Q02750 393 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-221ENST00000484566 RASSF7Q02833 373 aa11.75□□□□□ -0.53
DDX39B-221ENST00000484566 DDR1Q08345 913 aa11.75□□□□□ -0.53
DDX39B-221ENST00000484566 DSG2Q14126 1118 aa11.75□□□□□ -0.53
DDX39B-221ENST00000484566 GCC1Q96CN9 775 aa11.75□□□□□ -0.53
DDX39B-221ENST00000484566 MCOLN1Q9GZU1 580 aa11.75□□□□□ -0.53
DDX39B-221ENST00000484566 SRP68Q9UHB9 627 aaKnown RBP11.75□□□□□ -0.53
DDX39B-221ENST00000484566 GLTPD2A6NH11 291 aa11.74□□□□□ -0.53
DDX39B-221ENST00000484566 LMNB1P20700 586 aa11.74□□□□□ -0.53
DDX39B-221ENST00000484566 PLEKHO1Q53GL0 409 aaPredicted RBP11.74□□□□□ -0.53
DDX39B-221ENST00000484566 KDM6AO15550 1401 aaPredicted RBP11.74□□□□□ -0.53
DDX39B-221ENST00000484566 POTECB2RU33 542 aa11.73□□□□□ -0.53
DDX39B-221ENST00000484566 POLRMTO00411 1230 aaKnown RBP11.73□□□□□ -0.53
DDX39B-221ENST00000484566 PTCD1O75127 700 aaKnown RBP11.73□□□□□ -0.53
DDX39B-221ENST00000484566 ZPR1O75312 459 aa11.73□□□□□ -0.53
DDX39B-221ENST00000484566 TJP1Q07157 1748 aa11.73□□□□□ -0.53
DDX39B-221ENST00000484566 EIF4A2Q14240 407 aaKnown RBP11.73□□□□□ -0.53
DDX39B-221ENST00000484566 ZNF530Q6P9A1 599 aaPredicted RBP11.73□□□□□ -0.53
DDX39B-221ENST00000484566 CARD14Q9BXL6 1004 aa11.73□□□□□ -0.53
DDX39B-221ENST00000484566 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
DDX39B-221ENST00000484566 DLEC1Q9Y238 1755 aa11.73□□□□□ -0.53
DDX39B-221ENST00000484566 TBC1D12O60347 775 aa11.72□□□□□ -0.53
DDX39B-221ENST00000484566 MFSD10Q14728 455 aa11.72□□□□□ -0.53
DDX39B-221ENST00000484566 AMOTQ4VCS5 1084 aa11.72□□□□□ -0.53
DDX39B-221ENST00000484566 HABP4Q5JVS0 413 aaKnown RBP11.72□□□□□ -0.53
DDX39B-221ENST00000484566 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
DDX39B-221ENST00000484566 POLKQ9UBT6 870 aa11.72□□□□□ -0.53
DDX39B-221ENST00000484566 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
DDX39B-221ENST00000484566 CUL9Q8IWT3 2517 aa11.71□□□□□ -0.53
DDX39B-221ENST00000484566 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-221ENST00000484566 MTHFSP49914 203 aa11.71□□□□□ -0.53
DDX39B-221ENST00000484566 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
DDX39B-221ENST00000484566 TTLL6Q8N841 843 aa11.7□□□□□ -0.54
DDX39B-221ENST00000484566 ADAMTS7Q9UKP4 1686 aa11.7□□□□□ -0.54
DDX39B-221ENST00000484566 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
DDX39B-221ENST00000484566 ST18O60284 1047 aa11.69□□□□□ -0.54
DDX39B-221ENST00000484566 TNNT2P45379 298 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-221ENST00000484566 PASKQ96RG2 1323 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms