RNA–Protein interactions for RNA: ENST00000484538.1

MDH1-211, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-211ENST00000484538 FKBP5Q13451 457 aaPredicted RBP11.69□□□□□ -0.54
MDH1-211ENST00000484538 EFHC2Q5JST6 749 aa11.69□□□□□ -0.54
MDH1-211ENST00000484538 SH3PXD2AQ5TCZ1 1133 aa11.69□□□□□ -0.54
MDH1-211ENST00000484538 LYPD4Q6UWN0 246 aa11.69□□□□□ -0.54
MDH1-211ENST00000484538 ZIC5Q96T25 663 aa11.69□□□□□ -0.54
MDH1-211ENST00000484538 HCN2Q9UL51 889 aa11.69□□□□□ -0.54
MDH1-211ENST00000484538 SERTM1A2A2V5 107 aa11.68□□□□□ -0.54
MDH1-211ENST00000484538 PATL2C9JE40 543 aaKnown RBP11.68□□□□□ -0.54
MDH1-211ENST00000484538 EML1O00423 815 aa11.68□□□□□ -0.54
MDH1-211ENST00000484538 BNIP3LO60238 219 aa11.68□□□□□ -0.54
MDH1-211ENST00000484538 ARHGEF15O94989 841 aa11.68□□□□□ -0.54
MDH1-211ENST00000484538 KCNA1Q09470 495 aa11.68□□□□□ -0.54
MDH1-211ENST00000484538 NBPF1Q3BBV0 1214 aa11.68□□□□□ -0.54
MDH1-211ENST00000484538 C2orf49Q9BVC5 232 aaPredicted RBP11.68□□□□□ -0.54
MDH1-211ENST00000484538 A0A1W2PNR3 127 aa11.67□□□□□ -0.54
MDH1-211ENST00000484538 NLRP8Q86W28 1048 aa11.67□□□□□ -0.54
MDH1-211ENST00000484538 AEBP1Q8IUX7 1158 aa11.67□□□□□ -0.54
MDH1-211ENST00000484538 VTI1AQ96AJ9 217 aa11.67□□□□□ -0.54
MDH1-211ENST00000484538 ZCCHC2Q9C0B9 1178 aaKnown RBP11.67□□□□□ -0.54
MDH1-211ENST00000484538 MX2P20592 715 aa11.66□□□□□ -0.54
MDH1-211ENST00000484538 HIRAP54198 1017 aaPredicted RBP11.66□□□□□ -0.54
MDH1-211ENST00000484538 COL26A1Q96A83 441 aa11.66□□□□□ -0.54
MDH1-211ENST00000484538 ZNF232Q9UNY5 417 aa11.66□□□□□ -0.54
MDH1-211ENST00000484538 PTCD1O75127 700 aaKnown RBP11.65□□□□□ -0.54
MDH1-211ENST00000484538 CELA2BP08218 269 aaPredicted RBP11.65□□□□□ -0.54
MDH1-211ENST00000484538 TATP17735 454 aaPredicted RBP11.65□□□□□ -0.54
MDH1-211ENST00000484538 ARID4AP29374 1257 aaPredicted RBP11.65□□□□□ -0.54
MDH1-211ENST00000484538 KLRG1Q96E93 195 aa11.65□□□□□ -0.54
MDH1-211ENST00000484538 ABHD17AQ96GS6 310 aa11.65□□□□□ -0.54
MDH1-211ENST00000484538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.65□□□□□ -0.54
MDH1-211ENST00000484538 ATXN7L1Q9ULK2 861 aaPredicted RBP11.65□□□□□ -0.54
MDH1-211ENST00000484538 MTMR7Q9Y216 660 aa11.65□□□□□ -0.54
MDH1-211ENST00000484538 SVOPQ8N4V2 548 aa11.64□□□□□ -0.55
MDH1-211ENST00000484538 ACDQ96AP0 544 aa11.64□□□□□ -0.55
MDH1-211ENST00000484538 MKNK1Q9BUB5 465 aa11.64□□□□□ -0.55
MDH1-211ENST00000484538 C2CD2LO14523 706 aa11.63□□□□□ -0.55
MDH1-211ENST00000484538 PHF24Q9UPV7 400 aa11.63□□□□□ -0.55
MDH1-211ENST00000484538 PCDHGC4Q9Y5F7 938 aa11.63□□□□□ -0.55
MDH1-211ENST00000484538 ARSJQ5FYB0 599 aaPredicted RBP11.62□□□□□ -0.55
MDH1-211ENST00000484538 FIGNL1Q6PIW4 674 aa11.62□□□□□ -0.55
MDH1-211ENST00000484538 TXNDC2Q86VQ3 553 aa11.62□□□□□ -0.55
MDH1-211ENST00000484538 CCER1Q8TC90 406 aaPredicted RBP11.62□□□□□ -0.55
MDH1-211ENST00000484538 ADAMTS8Q9UP79 889 aa11.62□□□□□ -0.55
MDH1-211ENST00000484538 SCNN1AP37088 669 aa11.61□□□□□ -0.55
MDH1-211ENST00000484538 CTBSQ01459 385 aa11.61□□□□□ -0.55
MDH1-211ENST00000484538 GNEQ9Y223 722 aaKnown RBP11.61□□□□□ -0.55
MDH1-211ENST00000484538 ATXN7O15265 892 aaPredicted RBP11.6□□□□□ -0.55
MDH1-211ENST00000484538 FGFR3P22607 806 aa11.6□□□□□ -0.55
MDH1-211ENST00000484538 TNP2Q05952 138 aa11.6□□□□□ -0.55
MDH1-211ENST00000484538 SAMD5Q5TGI4 173 aa11.6□□□□□ -0.55
MDH1-211ENST00000484538 HCN4Q9Y3Q4 1203 aa11.6□□□□□ -0.55
MDH1-211ENST00000484538 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
MDH1-211ENST00000484538 MAP2K3P46734 347 aa11.59□□□□□ -0.55
MDH1-211ENST00000484538 CAPN12Q6ZSI9 719 aa11.59□□□□□ -0.55
MDH1-211ENST00000484538 SEPT3Q9UH03 358 aa11.59□□□□□ -0.55
MDH1-211ENST00000484538 FAM157BP0CG42 384 aa11.58□□□□□ -0.56
MDH1-211ENST00000484538 MAPTP10636 758 aaKnown RBP11.58□□□□□ -0.56
MDH1-211ENST00000484538 C1orf53Q5VUE5 145 aa11.58□□□□□ -0.56
MDH1-211ENST00000484538 ALDH16A1Q8IZ83 802 aa11.58□□□□□ -0.56
MDH1-211ENST00000484538 NSFL1CQ9UNZ2 370 aaKnown RBP11.58□□□□□ -0.56
MDH1-211ENST00000484538 GPC6Q9Y625 555 aaPredicted RBP11.58□□□□□ -0.56
MDH1-211ENST00000484538 EFSO43281 561 aa11.57□□□□□ -0.56
MDH1-211ENST00000484538 GSK3AP49840 483 aa11.57□□□□□ -0.56
MDH1-211ENST00000484538 NAA30Q147X3 362 aaPredicted RBP11.57□□□□□ -0.56
MDH1-211ENST00000484538 BICDL1Q6ZP65 573 aa11.57□□□□□ -0.56
MDH1-211ENST00000484538 NGLY1Q96IV0 654 aa11.57□□□□□ -0.56
MDH1-211ENST00000484538 PHACTR1Q9C0D0 580 aa11.57□□□□□ -0.56
MDH1-211ENST00000484538 IVNS1ABPQ9Y6Y0 642 aa11.57□□□□□ -0.56
MDH1-211ENST00000484538 DCDC2BA2VCK2 349 aa11.56□□□□□ -0.56
MDH1-211ENST00000484538 BCRP11274 1271 aa11.56□□□□□ -0.56
MDH1-211ENST00000484538 RTN1Q16799 776 aa11.56□□□□□ -0.56
MDH1-211ENST00000484538 C16orf46Q6P387 395 aa11.56□□□□□ -0.56
MDH1-211ENST00000484538 C1orf229Q6ZS94 237 aaPredicted RBP11.56□□□□□ -0.56
MDH1-211ENST00000484538 MYO19Q96H55 970 aa11.56□□□□□ -0.56
MDH1-211ENST00000484538 OXCT2Q9BYC2 517 aaPredicted RBP11.56□□□□□ -0.56
MDH1-211ENST00000484538 QTRT2Q9H974 415 aaKnown RBP11.56□□□□□ -0.56
MDH1-211ENST00000484538 LRRC4BQ9NT99 713 aa11.56□□□□□ -0.56
MDH1-211ENST00000484538 FAM182BQ5T319 152 aa11.55□□□□□ -0.56
MDH1-211ENST00000484538 LRRC69Q6ZNQ3 347 aa11.55□□□□□ -0.56
MDH1-211ENST00000484538 GTF3C2Q8WUA4 911 aaPredicted RBP11.55□□□□□ -0.56
MDH1-211ENST00000484538 OIP5O43482 229 aa11.54□□□□□ -0.56
MDH1-211ENST00000484538 BMP4P12644 408 aa11.54□□□□□ -0.56
MDH1-211ENST00000484538 SERPINB4P48594 390 aa11.54□□□□□ -0.56
MDH1-211ENST00000484538 STRN4Q9NRL3 753 aa11.54□□□□□ -0.56
MDH1-211ENST00000484538 EGFL7Q9UHF1 273 aa11.54□□□□□ -0.56
MDH1-211ENST00000484538 KHNYNO15037 678 aaKnown RBP11.53□□□□□ -0.56
MDH1-211ENST00000484538 COX20Q5RI15 118 aa11.53□□□□□ -0.56
MDH1-211ENST00000484538 RHPN1Q8TCX5 695 aa11.53□□□□□ -0.56
MDH1-211ENST00000484538 SAP130Q9H0E3 1048 aa11.53□□□□□ -0.56
MDH1-211ENST00000484538 ABL1P00519 1130 aa11.52□□□□□ -0.57
MDH1-211ENST00000484538 CD33P20138 364 aa11.52□□□□□ -0.57
MDH1-211ENST00000484538 MAP3K10Q02779 954 aa11.52□□□□□ -0.57
MDH1-211ENST00000484538 TRIM26Q12899 539 aaPredicted RBP11.52□□□□□ -0.57
MDH1-211ENST00000484538 HELQQ8TDG4 1101 aa11.52□□□□□ -0.57
MDH1-211ENST00000484538 GJA3Q9Y6H8 435 aa11.52□□□□□ -0.57
MDH1-211ENST00000484538 KCNMA1Q12791 1236 aa11.51□□□□□ -0.57
MDH1-211ENST00000484538 HSH2DQ96JZ2 352 aa11.51□□□□□ -0.57
MDH1-211ENST00000484538 KLF15Q9UIH9 416 aa11.51□□□□□ -0.57
MDH1-211ENST00000484538 DNMT3AQ9Y6K1 912 aaPredicted RBP11.51□□□□□ -0.57
MDH1-211ENST00000484538 SF3B2Q13435 895 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms