RNA–Protein interactions for RNA: ENST00000484453.1

RTKN-209, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-209ENST00000484453 DUSP27Q5VZP5 1158 aa28.82■■■□□ 2.2
RTKN-209ENST00000484453 ANXA1P04083 346 aa28.81■■■□□ 2.2
RTKN-209ENST00000484453 HOXB7P09629 217 aa28.81■■■□□ 2.2
RTKN-209ENST00000484453 HDGFL1Q5TGJ6 251 aa28.81■■■□□ 2.2
RTKN-209ENST00000484453 TSR2Q969E8 191 aaKnown RBP28.81■■■□□ 2.2
RTKN-209ENST00000484453 ZNF652Q9Y2D9 606 aa28.81■■■□□ 2.2
RTKN-209ENST00000484453 CACNA1FO60840 1977 aa28.81■■■□□ 2.2
RTKN-209ENST00000484453 KIF6Q6ZMV9 814 aa28.8■■■□□ 2.2
RTKN-209ENST00000484453 PXDNLA1KZ92 1463 aa28.79■■■□□ 2.2
RTKN-209ENST00000484453 CARMIL3Q8ND23 1372 aa28.79■■■□□ 2.2
RTKN-209ENST00000484453 IL16Q14005 1332 aa28.79■■■□□ 2.2
RTKN-209ENST00000484453 SERPINB2P05120 415 aa28.79■■■□□ 2.2
RTKN-209ENST00000484453 PROSER3Q2NL68 480 aa28.79■■■□□ 2.2
RTKN-209ENST00000484453 MIER1Q8N108 512 aa28.79■■■□□ 2.2
RTKN-209ENST00000484453 ARFGEF2Q9Y6D5 1785 aa28.79■■■□□ 2.2
RTKN-209ENST00000484453 ELL2O00472 640 aaPredicted RBP28.78■■■□□ 2.2
RTKN-209ENST00000484453 PDIA6Q15084 440 aa28.78■■■□□ 2.2
RTKN-209ENST00000484453 TTLL7Q6ZT98 887 aa28.78■■■□□ 2.2
RTKN-209ENST00000484453 CLEC4GQ6UXB4 293 aa28.77■■■□□ 2.2
RTKN-209ENST00000484453 WDR63Q8IWG1 891 aa28.77■■■□□ 2.2
RTKN-209ENST00000484453 SETDB2Q96T68 719 aa28.77■■■□□ 2.2
RTKN-209ENST00000484453 CHPF2Q9P2E5 772 aa28.77■■■□□ 2.2
RTKN-209ENST00000484453 ARFGEF1Q9Y6D6 1849 aa28.77■■■□□ 2.2
RTKN-209ENST00000484453 MAP3K15Q6ZN16 1313 aa28.76■■■□□ 2.19
RTKN-209ENST00000484453 C8orf58Q8NAV2 365 aa28.76■■■□□ 2.19
RTKN-209ENST00000484453 ZBTB3Q9H5J0 574 aa28.76■■■□□ 2.19
RTKN-209ENST00000484453 COL11A2P13942 1736 aaPredicted RBP28.75■■■□□ 2.19
RTKN-209ENST00000484453 HLFQ16534 295 aa28.75■■■□□ 2.19
RTKN-209ENST00000484453 DDX21Q9NR30 783 aaKnown RBP eCLIP28.75■■■□□ 2.19
RTKN-209ENST00000484453 LRP10Q7Z4F1 713 aa28.74■■■□□ 2.19
RTKN-209ENST00000484453 NPHP1O15259 732 aa28.73■■■□□ 2.19
RTKN-209ENST00000484453 GRIN3BO60391 1043 aa28.73■■■□□ 2.19
RTKN-209ENST00000484453 TGFB2P61812 414 aa28.73■■■□□ 2.19
RTKN-209ENST00000484453 NIP7Q9Y221 180 aaKnown RBP eCLIP28.73■■■□□ 2.19
RTKN-209ENST00000484453 FANCIQ9NVI1 1328 aa28.72■■■□□ 2.19
RTKN-209ENST00000484453 ERVV-1B6SEH8 477 aa28.72■■■□□ 2.19
RTKN-209ENST00000484453 RGL2O15211 777 aa28.72■■■□□ 2.19
RTKN-209ENST00000484453 AIMP1Q12904 312 aaKnown RBP28.72■■■□□ 2.19
RTKN-209ENST00000484453 DBF4Q9UBU7 674 aaPredicted RBP28.72■■■□□ 2.19
RTKN-209ENST00000484453 A0A0G2JLW4 131 aa28.71■■■□□ 2.19
RTKN-209ENST00000484453 TSPYL6Q8N831 410 aa28.71■■■□□ 2.19
RTKN-209ENST00000484453 XAGE3Q8WTP9 111 aa28.71■■■□□ 2.19
RTKN-209ENST00000484453 DPEP1P16444 411 aa28.7■■■□□ 2.18
RTKN-209ENST00000484453 COPS6Q7L5N1 327 aa28.7■■■□□ 2.18
RTKN-209ENST00000484453 CNBD1Q8NA66 436 aa28.69■■■□□ 2.18
RTKN-209ENST00000484453 ATP10DQ9P241 1426 aa28.69■■■□□ 2.18
RTKN-209ENST00000484453 PRR5LQ6MZQ0 368 aa28.68■■■□□ 2.18
RTKN-209ENST00000484453 NBPF5PQ86XG9 351 aaPredicted RBP28.68■■■□□ 2.18
RTKN-209ENST00000484453 CCDC24Q8N4L8 307 aa28.68■■■□□ 2.18
RTKN-209ENST00000484453 FAM177BA6PVY3 158 aa28.67■■■□□ 2.18
RTKN-209ENST00000484453 TWISTNBQ3B726 338 aaPredicted RBP28.67■■■□□ 2.18
RTKN-209ENST00000484453 CHRNA5P30532 468 aa28.66■■■□□ 2.18
RTKN-209ENST00000484453 ST5P78524 1137 aa28.66■■■□□ 2.18
RTKN-209ENST00000484453 GIGYF2Q6Y7W6 1299 aaKnown RBP28.66■■■□□ 2.18
RTKN-209ENST00000484453 SPINK5Q9NQ38 1064 aaPredicted RBP28.66■■■□□ 2.18
RTKN-209ENST00000484453 HYPKQ9NX55 129 aa28.66■■■□□ 2.18
RTKN-209ENST00000484453 TNRC6CQ9HCJ0 1690 aaKnown RBP28.65■■■□□ 2.18
RTKN-209ENST00000484453 GPTP24298 496 aa28.65■■■□□ 2.18
RTKN-209ENST00000484453 GOLGA2Q08379 1002 aa28.65■■■□□ 2.18
RTKN-209ENST00000484453 CCDC30Q5VVM6 783 aa28.65■■■□□ 2.18
RTKN-209ENST00000484453 MYH16Q9H6N6 1097 aa28.65■■■□□ 2.18
RTKN-209ENST00000484453 ZNF521Q96K83 1311 aa28.65■■■□□ 2.18
RTKN-209ENST00000484453 CHMP4AQ9BY43 222 aa28.64■■■□□ 2.18
RTKN-209ENST00000484453 LAMB2P55268 1798 aa28.64■■■□□ 2.18
RTKN-209ENST00000484453 EXOSC9Q06265 439 aaKnown RBP28.62■■■□□ 2.17
RTKN-209ENST00000484453 BCS1LQ9Y276 419 aa28.62■■■□□ 2.17
RTKN-209ENST00000484453 TCERG1O14776 1098 aaKnown RBP28.61■■■□□ 2.17
RTKN-209ENST00000484453 KCNA3P22001 575 aa28.61■■■□□ 2.17
RTKN-209ENST00000484453 TPTE2Q6XPS3 522 aa28.61■■■□□ 2.17
RTKN-209ENST00000484453 C2CD5Q86YS7 1000 aa28.61■■■□□ 2.17
RTKN-209ENST00000484453 PIM2Q9P1W9 311 aa28.61■■■□□ 2.17
RTKN-209ENST00000484453 UBN2Q6ZU65 1347 aa28.61■■■□□ 2.17
RTKN-209ENST00000484453 CCDC88AQ3V6T2 1871 aa28.61■■■□□ 2.17
RTKN-209ENST00000484453 GTF2E1P29083 439 aaPredicted RBP28.6■■■□□ 2.17
RTKN-209ENST00000484453 ZNF34Q8IZ26 560 aa28.6■■■□□ 2.17
RTKN-209ENST00000484453 BRIP1Q9BX63 1249 aa28.6■■■□□ 2.17
RTKN-209ENST00000484453 STK31Q9BXU1 1019 aa28.6■■■□□ 2.17
RTKN-209ENST00000484453 PHAXQ9H814 394 aaKnown RBP28.6■■■□□ 2.17
RTKN-209ENST00000484453 H0YIN7 160 aa28.59■■■□□ 2.17
RTKN-209ENST00000484453 PDE6BP35913 854 aa28.59■■■□□ 2.17
RTKN-209ENST00000484453 HSP90AB3PQ58FF7 597 aa28.59■■■□□ 2.17
RTKN-209ENST00000484453 PLBD2Q8NHP8 589 aa28.59■■■□□ 2.17
RTKN-209ENST00000484453 NYXQ9GZU5 481 aa28.59■■■□□ 2.17
RTKN-209ENST00000484453 ANKRD13DQ6ZTN6 518 aa28.58■■■□□ 2.17
RTKN-209ENST00000484453 IBTKQ9P2D0 1353 aaPredicted RBP28.57■■■□□ 2.16
RTKN-209ENST00000484453 SLX4Q8IY92 1834 aa28.57■■■□□ 2.16
RTKN-209ENST00000484453 SBF1O95248 1867 aa28.56■■■□□ 2.16
RTKN-209ENST00000484453 SUSD4Q5VX71 490 aa28.56■■■□□ 2.16
RTKN-209ENST00000484453 NUTM1Q86Y26 1132 aa28.56■■■□□ 2.16
RTKN-209ENST00000484453 DDX60Q8IY21 1712 aaKnown RBP28.56■■■□□ 2.16
RTKN-209ENST00000484453 TCIRG1Q13488 830 aa28.55■■■□□ 2.16
RTKN-209ENST00000484453 PARP10Q53GL7 1025 aa28.55■■■□□ 2.16
RTKN-209ENST00000484453 DALRD3Q5D0E6 543 aaKnown RBP28.55■■■□□ 2.16
RTKN-209ENST00000484453 PPP1R42Q7Z4L9 355 aa28.55■■■□□ 2.16
RTKN-209ENST00000484453 RIC3Q7Z5B4 369 aa28.55■■■□□ 2.16
RTKN-209ENST00000484453 PDZRN3Q9UPQ7 1066 aa28.55■■■□□ 2.16
RTKN-209ENST00000484453 ABCC12Q96J65 1359 aa28.54■■■□□ 2.16
RTKN-209ENST00000484453 VAMP4O75379 141 aa28.54■■■□□ 2.16
RTKN-209ENST00000484453 ZNF622Q969S3 477 aaKnown RBP eCLIP28.54■■■□□ 2.16
RTKN-209ENST00000484453 E9PSI1 815 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 507 ms