RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 RGL2O15211 777 aa37.39■■■■□ 3.58
HLA-C-207ENST00000484378 RIPK4P57078 832 aa37.39■■■■□ 3.58
HLA-C-207ENST00000484378 NIP7Q9Y221 180 aaKnown RBP eCLIP37.38■■■■□ 3.57
HLA-C-207ENST00000484378 KDM2BQ8NHM5 1336 aa37.36■■■■□ 3.57
HLA-C-207ENST00000484378 LMNB1P20700 586 aa37.36■■■■□ 3.57
HLA-C-207ENST00000484378 TSPYL4Q9UJ04 414 aa37.36■■■■□ 3.57
HLA-C-207ENST00000484378 HSPA6P17066 643 aa37.35■■■■□ 3.57
HLA-C-207ENST00000484378 LMOD3Q0VAK6 560 aa37.35■■■■□ 3.57
HLA-C-207ENST00000484378 NGEFQ8N5V2 710 aa37.35■■■■□ 3.57
HLA-C-207ENST00000484378 TMPOP42166 694 aaKnown RBP37.34■■■■□ 3.57
HLA-C-207ENST00000484378 ZNF219Q9P2Y4 722 aaPredicted RBP37.34■■■■□ 3.57
HLA-C-207ENST00000484378 ZC3H4Q9UPT8 1303 aaKnown RBP37.34■■■■□ 3.57
HLA-C-207ENST00000484378 NFKBIEO00221 500 aa37.33■■■■□ 3.57
HLA-C-207ENST00000484378 RRP7AQ9Y3A4 280 aaKnown RBP37.33■■■■□ 3.57
HLA-C-207ENST00000484378 C21orf2O43822 256 aa37.32■■■■□ 3.56
HLA-C-207ENST00000484378 TOMM70O94826 608 aa37.32■■■■□ 3.56
HLA-C-207ENST00000484378 SRGNP10124 158 aa37.32■■■■□ 3.56
HLA-C-207ENST00000484378 WDR43Q15061 677 aaKnown RBP eCLIP37.32■■■■□ 3.56
HLA-C-207ENST00000484378 HLFQ16534 295 aa37.32■■■■□ 3.56
HLA-C-207ENST00000484378 STYK1Q6J9G0 422 aa37.32■■■■□ 3.56
HLA-C-207ENST00000484378 CNKSR1Q969H4 720 aa37.32■■■■□ 3.56
HLA-C-207ENST00000484378 CACNA1SQ13698 1873 aa37.31■■■■□ 3.56
HLA-C-207ENST00000484378 TPTE2Q6XPS3 522 aa37.31■■■■□ 3.56
HLA-C-207ENST00000484378 CCDC146Q8IYE0 955 aa37.31■■■■□ 3.56
HLA-C-207ENST00000484378 TIAM2Q8IVF5 1701 aa37.3■■■■□ 3.56
HLA-C-207ENST00000484378 FAM177BA6PVY3 158 aa37.3■■■■□ 3.56
HLA-C-207ENST00000484378 MYL6BP14649 208 aa37.3■■■■□ 3.56
HLA-C-207ENST00000484378 PRELPP51888 382 aa37.3■■■■□ 3.56
HLA-C-207ENST00000484378 MASTLQ96GX5 879 aa37.3■■■■□ 3.56
HLA-C-207ENST00000484378 TNRC6CQ9HCJ0 1690 aaKnown RBP37.3■■■■□ 3.56
HLA-C-207ENST00000484378 KIF6Q6ZMV9 814 aa37.29■■■■□ 3.56
HLA-C-207ENST00000484378 ARFGEF2Q9Y6D5 1785 aa37.29■■■■□ 3.56
HLA-C-207ENST00000484378 PRPF40BQ6NWY9 871 aaKnown RBP37.28■■■■□ 3.56
HLA-C-207ENST00000484378 C16orf71Q8IYS4 520 aaPredicted RBP37.28■■■■□ 3.56
HLA-C-207ENST00000484378 CCDC88AQ3V6T2 1871 aa37.27■■■■□ 3.56
HLA-C-207ENST00000484378 MAP3K15Q6ZN16 1313 aa37.27■■■■□ 3.56
HLA-C-207ENST00000484378 SLX4Q8IY92 1834 aa37.26■■■■□ 3.56
HLA-C-207ENST00000484378 ERVV-1B6SEH8 477 aa37.26■■■■□ 3.56
HLA-C-207ENST00000484378 ERBB4Q15303 1308 aa37.26■■■■□ 3.56
HLA-C-207ENST00000484378 FER1L6Q2WGJ9 1857 aa37.26■■■■□ 3.55
HLA-C-207ENST00000484378 NEUROD2Q15784 382 aa37.25■■■■□ 3.55
HLA-C-207ENST00000484378 TTLL7Q6ZT98 887 aa37.25■■■■□ 3.55
HLA-C-207ENST00000484378 BABAM1Q9NWV8 329 aa37.25■■■■□ 3.55
HLA-C-207ENST00000484378 GTF2E1P29083 439 aaPredicted RBP37.24■■■■□ 3.55
HLA-C-207ENST00000484378 RUNDC1Q96C34 613 aa37.24■■■■□ 3.55
HLA-C-207ENST00000484378 NUP98P52948 1817 aa37.24■■■■□ 3.55
HLA-C-207ENST00000484378 RRAGCQ9HB90 399 aa37.23■■■■□ 3.55
HLA-C-207ENST00000484378 NPR1P16066 1061 aa37.22■■■■□ 3.55
HLA-C-207ENST00000484378 ZBTB3Q9H5J0 574 aa37.22■■■■□ 3.55
HLA-C-207ENST00000484378 PRKRIP1Q9H875 184 aaPredicted RBP37.22■■■■□ 3.55
HLA-C-207ENST00000484378 SOGA3Q5TF21 947 aa37.21■■■■□ 3.55
HLA-C-207ENST00000484378 RBM46Q8TBY0 533 aaKnown RBP37.21■■■■□ 3.55
HLA-C-207ENST00000484378 TAOK3Q9H2K8 898 aa37.21■■■■□ 3.55
HLA-C-207ENST00000484378 NYXQ9GZU5 481 aa37.2■■■■□ 3.55
HLA-C-207ENST00000484378 LTBP3Q9NS15 1303 aa37.19■■■■□ 3.54
HLA-C-207ENST00000484378 KLRG2A4D1S0 409 aaPredicted RBP37.19■■■■□ 3.54
HLA-C-207ENST00000484378 EIF2S2P20042 333 aaKnown RBP37.19■■■■□ 3.54
HLA-C-207ENST00000484378 ADAMTS8Q9UP79 889 aa37.19■■■■□ 3.54
HLA-C-207ENST00000484378 GLTPD2A6NH11 291 aa37.18■■■■□ 3.54
HLA-C-207ENST00000484378 GPTP24298 496 aa37.17■■■■□ 3.54
HLA-C-207ENST00000484378 ERFEQ4G0M1 354 aa37.16■■■■□ 3.54
HLA-C-207ENST00000484378 DICER1Q9UPY3 1922 aaKnown RBP37.16■■■■□ 3.54
HLA-C-207ENST00000484378 ABCC12Q96J65 1359 aa37.16■■■■□ 3.54
HLA-C-207ENST00000484378 NUTM1Q86Y26 1132 aa37.15■■■■□ 3.54
HLA-C-207ENST00000484378 TRIM35Q9UPQ4 493 aa37.14■■■■□ 3.54
HLA-C-207ENST00000484378 IBTKQ9P2D0 1353 aaPredicted RBP37.14■■■■□ 3.54
HLA-C-207ENST00000484378 UBN2Q6ZU65 1347 aa37.13■■■■□ 3.54
HLA-C-207ENST00000484378 APLP1P51693 650 aa37.13■■■■□ 3.53
HLA-C-207ENST00000484378 CCDC93Q567U6 631 aa37.13■■■■□ 3.53
HLA-C-207ENST00000484378 LAS1LQ9Y4W2 734 aaKnown RBP37.13■■■■□ 3.53
HLA-C-207ENST00000484378 PDIA6Q15084 440 aa37.12■■■■□ 3.53
HLA-C-207ENST00000484378 GIGYF2Q6Y7W6 1299 aaKnown RBP37.12■■■■□ 3.53
HLA-C-207ENST00000484378 C7orf43Q8WVR3 580 aa37.12■■■■□ 3.53
HLA-C-207ENST00000484378 FSTL1Q12841 308 aa37.11■■■■□ 3.53
HLA-C-207ENST00000484378 PROSER3Q2NL68 480 aa37.11■■■■□ 3.53
HLA-C-207ENST00000484378 LRP10Q7Z4F1 713 aa37.11■■■■□ 3.53
HLA-C-207ENST00000484378 CHL1O00533 1208 aa37.1■■■■□ 3.53
HLA-C-207ENST00000484378 ANXA1P04083 346 aa37.1■■■■□ 3.53
HLA-C-207ENST00000484378 DPY19L2Q6NUT2 758 aa37.1■■■■□ 3.53
HLA-C-207ENST00000484378 NECTIN2Q92692 538 aa37.1■■■■□ 3.53
HLA-C-207ENST00000484378 VEGFAP15692 232 aaPredicted RBP37.09■■■■□ 3.53
HLA-C-207ENST00000484378 ZNF34Q8IZ26 560 aa37.09■■■■□ 3.53
HLA-C-207ENST00000484378 ALDH1B1P30837 517 aa37.08■■■■□ 3.53
HLA-C-207ENST00000484378 SUSD4Q5VX71 490 aa37.08■■■■□ 3.53
HLA-C-207ENST00000484378 RIC1Q4ADV7 1423 aa37.08■■■■□ 3.53
HLA-C-207ENST00000484378 CRY2Q49AN0 593 aa37.07■■■■□ 3.52
HLA-C-207ENST00000484378 KRT24Q2M2I5 525 aa37.06■■■■□ 3.52
HLA-C-207ENST00000484378 NTSR2O95665 410 aa37.05■■■■□ 3.52
HLA-C-207ENST00000484378 PARP10Q53GL7 1025 aa37.05■■■■□ 3.52
HLA-C-207ENST00000484378 WDR90Q96KV7 1748 aa37.05■■■■□ 3.52
HLA-C-207ENST00000484378 OLFM4Q6UX06 510 aa37.04■■■■□ 3.52
HLA-C-207ENST00000484378 PPP1R42Q7Z4L9 355 aa37.04■■■■□ 3.52
HLA-C-207ENST00000484378 SMC1BQ8NDV3 1235 aa37.04■■■■□ 3.52
HLA-C-207ENST00000484378 RPGRQ92834 1020 aaKnown RBP37.04■■■■□ 3.52
HLA-C-207ENST00000484378 FKBP4Q02790 459 aaKnown RBP eCLIP37.03■■■■□ 3.52
HLA-C-207ENST00000484378 AIMP1Q12904 312 aaKnown RBP37.02■■■■□ 3.52
HLA-C-207ENST00000484378 COPS6Q7L5N1 327 aa37.02■■■■□ 3.52
HLA-C-207ENST00000484378 RTKN2Q8IZC4 609 aa37.02■■■■□ 3.52
HLA-C-207ENST00000484378 XAGE3Q8WTP9 111 aa37.01■■■■□ 3.52
HLA-C-207ENST00000484378 DDX21Q9NR30 783 aaKnown RBP eCLIP37.01■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms