RNA–Protein interactions for RNA: ENST00000484062.1

TMEM41A-207, Transcript of transmembrane protein 41A, humanhuman

TSL 3

Gene TMEM41A, Length 743 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-207ENST00000484062 LTV1Q96GA3 475 aaPredicted RBP12.88□□□□□ -0.35
TMEM41A-207ENST00000484062 TMUB1Q9BVT8 246 aa12.88□□□□□ -0.35
TMEM41A-207ENST00000484062 PARD3Q8TEW0 1356 aa12.88□□□□□ -0.35
TMEM41A-207ENST00000484062 DDX10Q13206 875 aaKnown RBP12.87□□□□□ -0.35
TMEM41A-207ENST00000484062 EYA1Q99502 592 aa12.87□□□□□ -0.35
TMEM41A-207ENST00000484062 PLEKHG2Q9H7P9 1386 aa12.86□□□□□ -0.35
TMEM41A-207ENST00000484062 IL2RBP14784 551 aa12.86□□□□□ -0.35
TMEM41A-207ENST00000484062 EIF4A2Q14240 407 aaKnown RBP12.86□□□□□ -0.35
TMEM41A-207ENST00000484062 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
TMEM41A-207ENST00000484062 ZNF787Q6DD87 383 aa12.86□□□□□ -0.35
TMEM41A-207ENST00000484062 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
TMEM41A-207ENST00000484062 RGPD2P0DJD1 1756 aa12.86□□□□□ -0.35
TMEM41A-207ENST00000484062 OVOS2A0A0G2JMS6 1433 aa12.86□□□□□ -0.35
TMEM41A-207ENST00000484062 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
TMEM41A-207ENST00000484062 MEGF6O75095 1541 aa12.85□□□□□ -0.35
TMEM41A-207ENST00000484062 MTHFSP49914 203 aa12.85□□□□□ -0.35
TMEM41A-207ENST00000484062 BCL9O00512 1426 aa12.85□□□□□ -0.35
TMEM41A-207ENST00000484062 IGSF1Q8N6C5 1336 aa12.85□□□□□ -0.35
TMEM41A-207ENST00000484062 RGPD1P0DJD0 1748 aa12.85□□□□□ -0.35
TMEM41A-207ENST00000484062 DDB1Q16531 1140 aa12.84□□□□□ -0.35
TMEM41A-207ENST00000484062 PRR14Q9BWN1 585 aa12.84□□□□□ -0.35
TMEM41A-207ENST00000484062 PCDHB3Q9Y5E6 796 aa12.84□□□□□ -0.35
TMEM41A-207ENST00000484062 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
TMEM41A-207ENST00000484062 PDE3BQ13370 1112 aa12.83□□□□□ -0.36
TMEM41A-207ENST00000484062 IL13P35225 146 aa12.82□□□□□ -0.36
TMEM41A-207ENST00000484062 RALBP1Q15311 655 aa12.82□□□□□ -0.36
TMEM41A-207ENST00000484062 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
TMEM41A-207ENST00000484062 KDRP35968 1356 aa12.81□□□□□ -0.36
TMEM41A-207ENST00000484062 EXOC5O00471 708 aa12.81□□□□□ -0.36
TMEM41A-207ENST00000484062 CNGB1Q14028 1251 aaPredicted RBP12.81□□□□□ -0.36
TMEM41A-207ENST00000484062 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
TMEM41A-207ENST00000484062 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
TMEM41A-207ENST00000484062 PKD1L3Q7Z443 1732 aa12.81□□□□□ -0.36
TMEM41A-207ENST00000484062 SHANK3Q9BYB0 1731 aa12.8□□□□□ -0.36
TMEM41A-207ENST00000484062 BLOC1S3Q6QNY0 202 aa12.8□□□□□ -0.36
TMEM41A-207ENST00000484062 CCDC125Q86Z20 511 aa12.8□□□□□ -0.36
TMEM41A-207ENST00000484062 RNF223E7ERA6 249 aa12.79□□□□□ -0.36
TMEM41A-207ENST00000484062 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
TMEM41A-207ENST00000484062 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
TMEM41A-207ENST00000484062 MARCH10Q8NA82 808 aaPredicted RBP12.79□□□□□ -0.36
TMEM41A-207ENST00000484062 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
TMEM41A-207ENST00000484062 SLC19A1P41440 591 aa12.78□□□□□ -0.36
TMEM41A-207ENST00000484062 FAM182BQ5T319 152 aa12.78□□□□□ -0.36
TMEM41A-207ENST00000484062 TNS1Q9HBL0 1735 aaKnown RBP12.77□□□□□ -0.36
TMEM41A-207ENST00000484062 TRIM67Q6ZTA4 783 aa12.77□□□□□ -0.37
TMEM41A-207ENST00000484062 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.37
TMEM41A-207ENST00000484062 MYBBP1AQ9BQG0 1328 aaKnown RBP12.77□□□□□ -0.37
TMEM41A-207ENST00000484062 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.37
TMEM41A-207ENST00000484062 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.37
TMEM41A-207ENST00000484062 DNAJB2P25686 324 aa12.76□□□□□ -0.37
TMEM41A-207ENST00000484062 MLLT3P42568 568 aaPredicted RBP12.76□□□□□ -0.37
TMEM41A-207ENST00000484062 EMID1Q96A84 441 aaPredicted RBP12.76□□□□□ -0.37
TMEM41A-207ENST00000484062 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
TMEM41A-207ENST00000484062 TLL1O43897 1013 aa12.75□□□□□ -0.37
TMEM41A-207ENST00000484062 SULT6B1Q6IMI4 303 aa12.75□□□□□ -0.37
TMEM41A-207ENST00000484062 NHSQ6T4R5 1651 aa12.75□□□□□ -0.37
TMEM41A-207ENST00000484062 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
TMEM41A-207ENST00000484062 SPG7Q9UQ90 795 aa12.75□□□□□ -0.37
TMEM41A-207ENST00000484062 SBF2Q86WG5 1849 aa12.74□□□□□ -0.37
TMEM41A-207ENST00000484062 CYP27B1O15528 508 aa12.73□□□□□ -0.37
TMEM41A-207ENST00000484062 SF3B2Q13435 895 aaKnown RBP12.73□□□□□ -0.37
TMEM41A-207ENST00000484062 AMOTQ4VCS5 1084 aa12.73□□□□□ -0.37
TMEM41A-207ENST00000484062 DDX54Q8TDD1 881 aaKnown RBP12.73□□□□□ -0.37
TMEM41A-207ENST00000484062 ZNF775Q96BV0 537 aaPredicted RBP12.73□□□□□ -0.37
TMEM41A-207ENST00000484062 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
TMEM41A-207ENST00000484062 RGPD3A6NKT7 1758 aaPredicted RBP12.72□□□□□ -0.37
TMEM41A-207ENST00000484062 RGPD4Q7Z3J3 1758 aa12.72□□□□□ -0.37
TMEM41A-207ENST00000484062 TRIM37O94972 964 aa12.72□□□□□ -0.37
TMEM41A-207ENST00000484062 PTGDRQ13258 359 aa12.72□□□□□ -0.37
TMEM41A-207ENST00000484062 SPRYD7Q5W111 196 aa12.72□□□□□ -0.37
TMEM41A-207ENST00000484062 RBM46Q8TBY0 533 aaKnown RBP12.72□□□□□ -0.37
TMEM41A-207ENST00000484062 TMEM134Q9H6X4 195 aa12.72□□□□□ -0.37
TMEM41A-207ENST00000484062 DOT1LQ8TEK3 1739 aa12.71□□□□□ -0.37
TMEM41A-207ENST00000484062 U2SURPO15042 1029 aaKnown RBP12.71□□□□□ -0.37
TMEM41A-207ENST00000484062 BAG6P46379 1132 aa12.71□□□□□ -0.37
TMEM41A-207ENST00000484062 PKDCCQ504Y2 493 aa12.71□□□□□ -0.37
TMEM41A-207ENST00000484062 PLEKHO1Q53GL0 409 aaPredicted RBP12.71□□□□□ -0.37
TMEM41A-207ENST00000484062 EP400Q96L91 3159 aa12.71□□□□□ -0.37
TMEM41A-207ENST00000484062 PPEF1O14829 653 aaPredicted RBP12.7□□□□□ -0.38
TMEM41A-207ENST00000484062 HMOX1P09601 288 aa12.7□□□□□ -0.38
TMEM41A-207ENST00000484062 PHKG2P15735 406 aa12.7□□□□□ -0.38
TMEM41A-207ENST00000484062 ZNF598Q86UK7 904 aaKnown RBP12.7□□□□□ -0.38
TMEM41A-207ENST00000484062 IFNL2Q8IZJ0 200 aa12.7□□□□□ -0.38
TMEM41A-207ENST00000484062 ANKLE1Q8NAG6 615 aa12.7□□□□□ -0.38
TMEM41A-207ENST00000484062 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
TMEM41A-207ENST00000484062 TOGARAM1Q9Y4F4 1720 aa12.69□□□□□ -0.38
TMEM41A-207ENST00000484062 ACTN4O43707 911 aaKnown RBP12.69□□□□□ -0.38
TMEM41A-207ENST00000484062 S1PR4O95977 384 aa12.69□□□□□ -0.38
TMEM41A-207ENST00000484062 KMT5BQ4FZB7 885 aa12.69□□□□□ -0.38
TMEM41A-207ENST00000484062 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
TMEM41A-207ENST00000484062 ADGRG1Q9Y653 693 aa12.69□□□□□ -0.38
TMEM41A-207ENST00000484062 FCHSD2O94868 740 aa12.68□□□□□ -0.38
TMEM41A-207ENST00000484062 HSP90AB1P08238 724 aaKnown RBP12.68□□□□□ -0.38
TMEM41A-207ENST00000484062 U2AF1L5P0DN76 240 aaPredicted RBP12.68□□□□□ -0.38
TMEM41A-207ENST00000484062 U2AF1Q01081 240 aaKnown RBP eCLIP12.68□□□□□ -0.38
TMEM41A-207ENST00000484062 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
TMEM41A-207ENST00000484062 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
TMEM41A-207ENST00000484062 PLSCR1O15162 318 aa12.67□□□□□ -0.38
TMEM41A-207ENST00000484062 ANP32CO43423 234 aa12.67□□□□□ -0.38
TMEM41A-207ENST00000484062 KCNQ2O43526 872 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms