RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 PROSER3Q2NL68 480 aa15.91■□□□□ 0.14
HDLBP-239ENST00000483086 DALRD3Q5D0E6 543 aaKnown RBP15.91■□□□□ 0.14
HDLBP-239ENST00000483086 ARHGAP27Q6ZUM4 889 aa15.91■□□□□ 0.14
HDLBP-239ENST00000483086 NGEFQ8N5V2 710 aa15.91■□□□□ 0.14
HDLBP-239ENST00000483086 ANKRD36CQ5JPF3 1778 aa15.9■□□□□ 0.14
HDLBP-239ENST00000483086 ANXA1P04083 346 aa15.9■□□□□ 0.14
HDLBP-239ENST00000483086 C2CD5Q86YS7 1000 aa15.9■□□□□ 0.14
HDLBP-239ENST00000483086 ZNF526Q8TF50 670 aaPredicted RBP15.9■□□□□ 0.14
HDLBP-239ENST00000483086 TIAM2Q8IVF5 1701 aa15.89■□□□□ 0.13
HDLBP-239ENST00000483086 SENP3-EIF4A1A0A087X0R7 540 aa15.89■□□□□ 0.13
HDLBP-239ENST00000483086 MYL6BP14649 208 aa15.89■□□□□ 0.13
HDLBP-239ENST00000483086 SETDB2Q96T68 719 aa15.89■□□□□ 0.13
HDLBP-239ENST00000483086 DICER1Q9UPY3 1922 aaKnown RBP15.88■□□□□ 0.13
HDLBP-239ENST00000483086 ZNF316A6NFI3 1004 aaPredicted RBP15.88■□□□□ 0.13
HDLBP-239ENST00000483086 CHL1O00533 1208 aa15.88■□□□□ 0.13
HDLBP-239ENST00000483086 RASSF7Q02833 373 aa15.88■□□□□ 0.13
HDLBP-239ENST00000483086 CLEC4GQ6UXB4 293 aa15.88■□□□□ 0.13
HDLBP-239ENST00000483086 BRIP1Q9BX63 1249 aa15.88■□□□□ 0.13
HDLBP-239ENST00000483086 APAF1O14727 1248 aa15.87■□□□□ 0.13
HDLBP-239ENST00000483086 CNBD1Q8NA66 436 aa15.87■□□□□ 0.13
HDLBP-239ENST00000483086 NECTIN2Q92692 538 aa15.87■□□□□ 0.13
HDLBP-239ENST00000483086 UBN2Q6ZU65 1347 aa15.87■□□□□ 0.13
HDLBP-239ENST00000483086 LAMB2P55268 1798 aa15.87■□□□□ 0.13
HDLBP-239ENST00000483086 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
HDLBP-239ENST00000483086 FAM177BA6PVY3 158 aa15.86■□□□□ 0.13
HDLBP-239ENST00000483086 EIF2S2P20042 333 aaKnown RBP15.86■□□□□ 0.13
HDLBP-239ENST00000483086 C1QTNF8P60827 252 aa15.86■□□□□ 0.13
HDLBP-239ENST00000483086 C9orf131Q5VYM1 1079 aa15.86■□□□□ 0.13
HDLBP-239ENST00000483086 NIP7Q9Y221 180 aaKnown RBP eCLIP15.86■□□□□ 0.13
HDLBP-239ENST00000483086 MAP3K15Q6ZN16 1313 aa15.86■□□□□ 0.13
HDLBP-239ENST00000483086 H0YIN7 160 aa15.85■□□□□ 0.13
HDLBP-239ENST00000483086 NFKBIEO00221 500 aa15.85■□□□□ 0.13
HDLBP-239ENST00000483086 SRGNP10124 158 aa15.85■□□□□ 0.13
HDLBP-239ENST00000483086 LMOD3Q0VAK6 560 aa15.85■□□□□ 0.13
HDLBP-239ENST00000483086 TTLL6Q8N841 843 aa15.85■□□□□ 0.13
HDLBP-239ENST00000483086 ZBTB3Q9H5J0 574 aa15.85■□□□□ 0.13
HDLBP-239ENST00000483086 BABAM1Q9NWV8 329 aa15.85■□□□□ 0.13
HDLBP-239ENST00000483086 LAS1LQ9Y4W2 734 aaKnown RBP15.85■□□□□ 0.13
HDLBP-239ENST00000483086 KIF3CO14782 793 aa15.84■□□□□ 0.13
HDLBP-239ENST00000483086 ZNF853P0CG23 659 aa15.84■□□□□ 0.13
HDLBP-239ENST00000483086 NPM2Q86SE8 214 aaKnown RBP15.84■□□□□ 0.13
HDLBP-239ENST00000483086 SLC51AQ86UW1 340 aa15.84■□□□□ 0.13
HDLBP-239ENST00000483086 ZNF622Q969S3 477 aaKnown RBP eCLIP15.84■□□□□ 0.13
HDLBP-239ENST00000483086 TAF1P21675 1872 aa15.83■□□□□ 0.12
HDLBP-239ENST00000483086 KLRG2A4D1S0 409 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-239ENST00000483086 ERVV-1B6SEH8 477 aa15.83■□□□□ 0.12
HDLBP-239ENST00000483086 RGL2O15211 777 aa15.83■□□□□ 0.12
HDLBP-239ENST00000483086 PDE6BP35913 854 aa15.83■□□□□ 0.12
HDLBP-239ENST00000483086 NBPF5PQ86XG9 351 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-239ENST00000483086 NUTM1Q86Y26 1132 aa15.83■□□□□ 0.12
HDLBP-239ENST00000483086 GPBP1L1Q9HC44 474 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-239ENST00000483086 MBIPQ9NS73 344 aa15.83■□□□□ 0.12
HDLBP-239ENST00000483086 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-239ENST00000483086 ZNF652Q9Y2D9 606 aa15.83■□□□□ 0.12
HDLBP-239ENST00000483086 ERBB4Q15303 1308 aa15.83■□□□□ 0.12
HDLBP-239ENST00000483086 C21orf2O43822 256 aa15.82■□□□□ 0.12
HDLBP-239ENST00000483086 GPTP24298 496 aa15.82■□□□□ 0.12
HDLBP-239ENST00000483086 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
HDLBP-239ENST00000483086 OLFM4Q6UX06 510 aa15.82■□□□□ 0.12
HDLBP-239ENST00000483086 ZNF34Q8IZ26 560 aa15.82■□□□□ 0.12
HDLBP-239ENST00000483086 RNF181Q9P0P0 153 aa15.82■□□□□ 0.12
HDLBP-239ENST00000483086 ST5P78524 1137 aa15.81■□□□□ 0.12
HDLBP-239ENST00000483086 C3orf67Q6ZVT6 689 aa15.81■□□□□ 0.12
HDLBP-239ENST00000483086 C7orf43Q8WVR3 580 aa15.81■□□□□ 0.12
HDLBP-239ENST00000483086 CFAP44Q96MT7 982 aa15.81■□□□□ 0.12
HDLBP-239ENST00000483086 NMRK2Q9NPI5 230 aa15.81■□□□□ 0.12
HDLBP-239ENST00000483086 DDX60Q8IY21 1712 aaKnown RBP15.8■□□□□ 0.12
HDLBP-239ENST00000483086 SNED1Q8TER0 1413 aa15.8■□□□□ 0.12
HDLBP-239ENST00000483086 NTSR2O95665 410 aa15.8■□□□□ 0.12
HDLBP-239ENST00000483086 ERFEQ4G0M1 354 aa15.8■□□□□ 0.12
HDLBP-239ENST00000483086 PRPF40BQ6NWY9 871 aaKnown RBP15.8■□□□□ 0.12
HDLBP-239ENST00000483086 GIGYF2Q6Y7W6 1299 aaKnown RBP15.8■□□□□ 0.12
HDLBP-239ENST00000483086 CHPF2Q9P2E5 772 aa15.8■□□□□ 0.12
HDLBP-239ENST00000483086 STYK1Q6J9G0 422 aa15.79■□□□□ 0.12
HDLBP-239ENST00000483086 KIF6Q6ZMV9 814 aa15.79■□□□□ 0.12
HDLBP-239ENST00000483086 COPS6Q7L5N1 327 aa15.79■□□□□ 0.12
HDLBP-239ENST00000483086 XAGE3Q8WTP9 111 aa15.79■□□□□ 0.12
HDLBP-239ENST00000483086 MASTLQ96GX5 879 aa15.79■□□□□ 0.12
HDLBP-239ENST00000483086 COL4A1P02462 1669 aa15.79■□□□□ 0.12
HDLBP-239ENST00000483086 AIMP1Q12904 312 aaKnown RBP15.78■□□□□ 0.12
HDLBP-239ENST00000483086 TPTE2Q6XPS3 522 aa15.78■□□□□ 0.12
HDLBP-239ENST00000483086 ZNF428Q96B54 188 aa15.78■□□□□ 0.12
HDLBP-239ENST00000483086 DDX21Q9NR30 783 aaKnown RBP eCLIP15.78■□□□□ 0.12
HDLBP-239ENST00000483086 IBTKQ9P2D0 1353 aaPredicted RBP15.77■□□□□ 0.12
HDLBP-239ENST00000483086 NPHP1O15259 732 aa15.77■□□□□ 0.12
HDLBP-239ENST00000483086 DUSP27Q5VZP5 1158 aa15.77■□□□□ 0.12
HDLBP-239ENST00000483086 SYNE4Q8N205 404 aa15.77■□□□□ 0.12
HDLBP-239ENST00000483086 RIC1Q4ADV7 1423 aa15.77■□□□□ 0.11
HDLBP-239ENST00000483086 LMNB1P20700 586 aa15.76■□□□□ 0.11
HDLBP-239ENST00000483086 CRY2Q49AN0 593 aa15.76■□□□□ 0.11
HDLBP-239ENST00000483086 C8orf58Q8NAV2 365 aa15.76■□□□□ 0.11
HDLBP-239ENST00000483086 IFT57Q9NWB7 429 aa15.76■□□□□ 0.11
HDLBP-239ENST00000483086 PDZRN3Q9UPQ7 1066 aa15.76■□□□□ 0.11
HDLBP-239ENST00000483086 COL4A5P29400 1685 aa15.76■□□□□ 0.11
HDLBP-239ENST00000483086 ELL2O00472 640 aaPredicted RBP15.75■□□□□ 0.11
HDLBP-239ENST00000483086 NPR1P16066 1061 aa15.75■□□□□ 0.11
HDLBP-239ENST00000483086 HDGFL1Q5TGJ6 251 aa15.75■□□□□ 0.11
HDLBP-239ENST00000483086 TSPYL6Q8N831 410 aa15.75■□□□□ 0.11
HDLBP-239ENST00000483086 CNKSR1Q969H4 720 aa15.75■□□□□ 0.11
HDLBP-239ENST00000483086 MRS2Q9HD23 443 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms